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2020 – today
- 2022
[j13]Malcolm E. Fisher
, Erik Segerdell, Nicolas Matentzoglu, Mardi J. Nenni, Joshua D. Fortriede, Stanley Chu, Troy J. Pells, David Osumi-Sutherland, Praneet Chaturvedi, Christina James-Zorn, Nivitha Sundararaj, Vaneet S. Lotay, Virgilio Ponferrada, Dong Zhuo Wang, Eugene Kim, Sergei Agalakov, Bradley I. Arshinoff, Kamran Karimi, Peter D. Vize, Aaron M. Zorn:
The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development. BMC Bioinform. 23(1): 99 (2022)- [j12]Bradley I. Arshinoff, Gregory A. Cary, Kamran Karimi, Saoirse Foley, Sergei Agalakov, Francisco Delgado, Vaneet S. Lotay, Carolyn Ku, Troy J. Pells, Thomas R. Beatman, Eugene Kim, R. Andrew Cameron, Peter D. Vize, Cheryl A. Telmer, Jenifer C. Croce, Charles A. Ettensohn, Veronica F. Hinman:
Echinobase: leveraging an extant model organism database to build a knowledgebase supporting research on the genomics and biology of echinoderms. Nucleic Acids Res. 50(D1): 970-979 (2022) - 2021
- [j11]Saoirse Foley, Carolyn Ku, Brad Arshinoff, Vaneet Lotay, Kamran Karimi, Peter D. Vize, Veronica F. Hinman:
Integration of 1: 1 orthology maps and updated datasets into Echinobase. Database J. Biol. Databases Curation 2021 (2021) - [j10]Kamran Karimi, Sergei Agalakov, Cheryl A. Telmer, Thomas R. Beatman, Troy J. Pells, Bradley I. M. Arshinoff, Carolyn Ku, Saoirse Foley, Veronica F. Hinman, Charles A. Ettensohn, Peter D. Vize:
Classifying domain-specific text documents containing ambiguous keywords. Database J. Biol. Databases Curation 2021 (2021) - 2020
- [j9]Joshua D. Fortriede, Troy J. Pells, Stanley Chu, Praneet Chaturvedi, Dong Zhou Wang, Malcolm E. Fisher, Christina James-Zorn, Ying Wang, Mardi J. Nenni, Kevin A. Burns, Vaneet Lotay, Virgilio G. Ponferrada, Kamran Karimi, Aaron M. Zorn, Peter D. Vize:
Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database. Nucleic Acids Res. 48(Database-Issue): D776-D782 (2020)
2010 – 2019
- 2018
- [j8]Kamran Karimi, Joshua D. Fortriede, Vaneet Lotay, Kevin A. Burns, Dong Zhou Wang, Malcolm E. Fisher, Troy J. Pells, Christina James-Zorn, Ying Wang, Virgilio G. Ponferrada, Stanley Chu, Praneet Chaturvedi, Aaron M. Zorn, Peter D. Vize:
Xenbase: a genomic, epigenomic and transcriptomic model organism database. Nucleic Acids Res. 46(Database-Issue): D861-D868 (2018) - [c17]Troy J. Pells, Malcolm E. Fisher, Erik Segerdell, Joshua D. Fortriede, Kevin A. Burns, Stanley Chu, Praneet Chaturvedi, Christina James-Zorn, Vaneet Lotay, Mardi J. Nenni, Virgilio G. Ponferrada, Dong Zhou Wang, Ying Wang, Kamran Karimi, Peter D. Vize, Aaron M. Zorn:
Visualization of Gene Expression and Expression as a Phenotype with the XPO, XAO and DO using a Combination of Experimental Data Sources. ICBO 2018 - 2015
- [j7]J. Brad Karpinka, Joshua D. Fortriede, Kevin A. Burns, Christina James-Zorn, Virgilio G. Ponferrada, Jacqueline Lee, Kamran Karimi, Aaron M. Zorn, Peter D. Vize:
Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes. Nucleic Acids Res. 43(Database-Issue): 756-763 (2015) - [i9]Kamran Karimi:
The Feasibility of Using OpenCL Instead of OpenMP for Parallel CPU Programming. CoRR abs/1503.06532 (2015) - 2014
- [j6]Kamran Karimi, Peter D. Vize:
The Virtual Xenbase: transitioning an online bioinformatics resource to a private cloud. Database J. Biol. Databases Curation 2014 (2014) - [j5]Kamran Karimi, Aleks G. Pamir, M. Haris Afzal:
Accelerating a Cloud-Based Software GNSS Receiver. Int. J. Grid High Perform. Comput. 6(3): 17-33 (2014) - 2013
- [i8]Kamran Karimi, Aleks G. Pamir, M. Haris Afzal:
Accelerating a Cloud-Based Software GNSS Receiver. CoRR abs/1309.0052 (2013) - 2012
- [j4]Kamran Karimi, Neil G. Dickson, Firas Hamze, Mohammad H. S. Amin, Marshall Drew-Brook, Fabián A. Chudak, Paul I. Bunyk, William G. Macready, Geordie Rose:
Investigating the performance of an adiabatic quantum optimization processor. Quantum Inf. Process. 11(1): 77-88 (2012) - [i7]Kamran Karimi:
Challenges of Upgrading a Virtual Appliance. CoRR abs/1207.0546 (2012) - 2011
- [j3]Kamran Karimi, Neil G. Dickson, Firas Hamze:
High-performance Physics Simulations Using Multi-core CPUs and GPGPUs in a Volunteer Computing Context. Int. J. High Perform. Comput. Appl. 25(1): 61-69 (2011) - [j2]Neil G. Dickson, Kamran Karimi, Firas Hamze:
Importance of explicit vectorization for CPU and GPU software performance. J. Comput. Phys. 230(13): 5383-5398 (2011) - 2010
- [i6]Kamran Karimi, Neil G. Dickson, Firas Hamze:
High-Performance Physics Simulations Using Multi-Core CPUs and GPGPUs in a Volunteer Computing Context. CoRR abs/1004.0023 (2010) - [i5]Neil G. Dickson, Kamran Karimi, Firas Hamze:
Importance of Explicit Vectorization for CPU and GPU Software Performance. CoRR abs/1004.0024 (2010) - [i4]Kamran Karimi, Howard J. Hamilton:
Generation and Interpretation of Temporal Decision Rules. CoRR abs/1004.3334 (2010) - [i3]Kamran Karimi, Neil G. Dickson, Firas Hamze:
A Performance Comparison of CUDA and OpenCL. CoRR abs/1005.2581 (2010) - [i2]Geordie Rose, Kamran Karimi, Neil G. Dickson, Firas Hamze, Mohammad H. S. Amin, Marshall Drew-Brook, Fabián A. Chudak, Paul I. Bunyk, William G. Macready:
Investigating the Performance of an Adiabatic Quantum Optimization Processor. CoRR abs/1006.4147 (2010) - [i1]Kamran Karimi:
A Brief Introduction to Temporality and Causality. CoRR abs/1007.2449 (2010)
2000 – 2009
- 2009
- [j1]Xing Li, Howard J. Hamilton, Kamran Karimi, Liqiang Geng:
The Multi-Tree Cubing algorithm for computing iceberg cubes. J. Intell. Inf. Syst. 33(2): 179-208 (2009) - 2008
- [c16]Kamran Karimi, Howard J. Hamilton:
Using Dependence Diagrams to Summarize Decision Rule Sets. Canadian AI 2008: 163-172 - [c15]Mahdi Shafieezadeh, Seyed Mohmmad Javad Jalali, Kamran Karimi, Nafiseh Payani:
Risk Assessment Approach to Knowledge Management based on SECI Model. IKE 2008: 528-534 - [c14]Navid Nezafati, Seyed Mohmmad Javad Jalali, Mahdi Shafieezadeh, Kamran Karimi:
A developed methodology for human driven knowledge acquisition. ITI 2008: 645-648 - 2006
- [c13]Kamran Karimi, Mohsen Sharifi:
Transparent Distributed Programming under Linux. HPCS 2006: 13 - 2005
- [c12]Howard J. Hamilton, Kamran Karimi:
The TIMERS II Algorithm for the Discovery of Causality. PAKDD 2005: 744-750 - 2003
- [c11]Kamran Karimi, Howard J. Hamilton:
Discovering Temporal/Causal Rules: A Comparison of Methods. AI 2003: 175-189 - [c10]Kamran Karimi:
Back to the Future: Changing the Direction of Time to Discover Causality. AI 2003: 624-626 - [c9]Kamran Karimi, Howard J. Hamilton:
Distinguishing Causal and Acausal Temporal Relations. PAKDD 2003: 234-240 - 2002
- [c8]Kamran Karimi, Howard J. Hamilton:
RFCT: An Association-Based Causality Miner. AI 2002: 334-338 - [c7]Kamran Karimi, Howard J. Hamilton:
TimeSleuth: A Tool for Discovering Causal and Temporal Rules. ICTAI 2002: 375-380 - [c6]Kamran Karimi, Howard J. Hamilton:
Discovering Temporal Rules from Temporally Ordered Data. IDEAL 2002: 25-30 - 2000
- [c5]Kamran Karimi:
The Iterative Multi-agent Method for Solving Complex Search Problems. AI 2000: 369-378 - [c4]Kamran Karimi, Howard J. Hamilton:
Logical Decision Rules: Teaching C4.5 to Speak Prolog. IDEAL 2000: 85-90 - [c3]Kamran Karimi, Howard J. Hamilton:
Finding Temporal Relations: Causal Bayesian Networks vs. C4.5. ISMIS 2000: 266-273 - [c2]Kamran Karimi, Julia Ann Johnson, Howard J. Hamilton:
A Proposal for Including Behavior in the Process of Object Similarity Assessment with Examples from Artificial Life. Rough Sets and Current Trends in Computing 2000: 642-646
1990 – 1999
- 1997
- [c1]Kamran Karimi, Mohsen Sharifi:
DIPC: A System Software Solution for Distributed Programming. PDPTA 1997: 218-221
Coauthor Index
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