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2020 – today
- 2020
[j9]Chirag Jain, Arang Rhie, Haowen Zhang, Claudia Chu
, Brian Walenz, Sergey Koren, Adam M. Phillippy:
Weighted minimizer sampling improves long read mapping. Bioinform. 36(Supplement-1): i111-i118 (2020)
2010 – 2019
- 2019
- [j8]Jay Ghurye, Arang Rhie, Brian Walenz, Anthony D. Schmitt, Siddarth Selvaraj, Mihai Pop, Adam M. Phillippy, Sergey Koren:
Integrating Hi-C links with assembly graphs for chromosome-scale assembly. PLoS Comput. Biol. 15(8) (2019) - 2011
- [j7]Brian Walenz, Liliana Florea:
Sim4db and Leaff: utilities for fast batch spliced alignment and sequence indexing. Bioinform. 27(13): 1869-1870 (2011) - 2010
- [j6]Sergey Koren, Jason R. Miller, Brian Walenz, Granger G. Sutton:
An algorithm for automated closure during assembly. BMC Bioinform. 11: 457 (2010)
2000 – 2009
- 2008
- [j5]Gennady Denisov, Brian Walenz, Aaron L. Halpern, Jason R. Miller, Nelson Axelrod, Samuel Levy, Granger G. Sutton:
Consensus generation and variant detection by Celera Assembler. Bioinform. 24(8): 1035-1040 (2008) - [j4]Jason R. Miller, Arthur L. Delcher, Sergey Koren, Eli Venter, Brian Walenz, Anushka Brownley, Justin Johnson, Kelvin Li, Clark M. Mobarry, Granger G. Sutton:
Aggressive assembly of pyrosequencing reads with mates. Bioinform. 24(24): 2818-2824 (2008) - 2005
- [j3]Ian M. Dew, Brian Walenz, Granger G. Sutton:
A Tool for Analyzing Mate Pairs in Assemblies (TAMPA). J. Comput. Biol. 12(5): 497-513 (2005) - [j2]Ross A. Lippert, Clark M. Mobarry, Brian Walenz:
A Space-Efficient Construction of the Burrows-Wheeler Transform for Genomic Data. J. Comput. Biol. 12(7): 943-951 (2005) - 2004
- [j1]Alberto Caprara, Robert D. Carr, Sorin Istrail, Giuseppe Lancia, Brian Walenz:
1001 Optimal PDB Structure Alignments: Integer Programming Methods for Finding the Maximum Contact Map Overlap. J. Comput. Biol. 11(1): 27-52 (2004) - 2001
- [c3]Russell J. Turner, Kabir Chaturvedi, Nathan Edwards, Daniel P. Fasulo, Aaron L. Halpern, Daniel H. Huson, Oliver Kohlbacher, Jason R. Miller, Knut Reinert, Karin A. Remington, Russell Schwartz, Brian Walenz, Shibu Yooseph, Sorin Istrail:
Visualization challenges for a new cyberpharmaceutical computing paradigm. IEEE Symposium on Parallel and Large-Data Visualization and Graphics 2001: 7-18 - [c2]Giuseppe Lancia, Robert D. Carr, Brian Walenz, Sorin Istrail:
101 optimal PDB structure alignments: a branch-and-cut algorithm for the maximum contact map overlap problem. RECOMB 2001: 193-202 - 2000
- [c1]Deborah Goldman, Sorin Istrail, Giuseppe Lancia, Antonio Piccolboni, Brian Walenz:
Algorithmic strategies in combinatorial chemistry. SODA 2000: 275-284
Coauthor Index
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