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ORCIDLiudmila S. Mainzer
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- affiliation: University of Illinois at Urbana-Champaign, IL, USA
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Journal Articles
- 2020
[j6]Jan Voges
, Tom Paridaens, Fabian Müntefering, Liudmila S. Mainzer, Brian Bliss, Mingyu Yang, Idoia Ochoa, Jan Fostier, Jörn Ostermann, Mikel Hernaez:
GABAC: an arithmetic coding solution for genomic data. Bioinform. 36(7): 2275-2277 (2020)- 2019
- [j5]Jacob R Heldenbrand, Saurabh Baheti, Matthew A. Bockol, Travis M. Drucker, Steven N. Hart, Matthew E. Hudson, Ravishankar K. Iyer, Michael Kalmbach, Katherine Irene Kendig, Eric W. Klee, Nathan R Mattson, Eric D. Wieben, Mathieu Wiepert, Derek E. Wildman, Liudmila S. Mainzer:
Recommendations for performance optimizations when using GATK3.8 and GATK4. BMC Bioinform. 20(1): 557:1-557:9 (2019) - [j4]Jacob R Heldenbrand, Saurabh Baheti, Matthew A. Bockol, Travis M. Drucker, Steven N. Hart, Matthew E. Hudson, Ravishankar K. Iyer, Michael Kalmbach, Katherine Irene Kendig, Eric W. Klee, Nathan R Mattson, Eric D. Wieben, Mathieu Wiepert, Derek E. Wildman, Liudmila S. Mainzer:
Correction to: Recommendations for performance optimizations when using GATK3.8 and GATK4. BMC Bioinform. 20(1): 722 (2019) - 2018
- [j3]Yingxue Ren, Joseph S. Reddy, Cyril Pottier, Vivekananda Sarangi, Shulan Tian, Jason P. Sinnwell, Shannon K. McDonnell, Joanna M. Biernacka, Minerva M. Carrasquillo, Owen A. Ross, Nilüfer Ertekin-Taner, Rosa Rademakers, Matthew Hudson, Liudmila Sergeevna Mainzer, Yan W. Asmann:
Identification of missing variants by combining multiple analytic pipelines. BMC Bioinform. 19(1): 139:1-139:12 (2018) - [j2]Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Scott Hazelhurst, Hocine Bendou, Eugene de Beste, Phelelani T. Mpangase, Oussema Souiai, Mustafa Alghali, Long Yi, Brian D. O'Connor, Michael R. Crusoe, Don Armstrong, Shaun Aron, Fourie Joubert, Azza E. Ahmed, Mamana Mbiyavanga, Peter van Heusden, Lerato E. Magosi, Jennie Zermeno, Liudmila S. Mainzer, Faisal M. Fadlelmola, C. Victor Jongeneel, Nicola J. Mulder:
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics. BMC Bioinform. 19(1): 457:1-457:13 (2018) - 2017
- [j1]C. Victor Jongeneel, Ovokeraye Achinike-Oduaran, Ezekiel F. Adebiyi, Marion O. Adebiyi, Seun Adeyemi, Bola Akanle, Shaun Aron, Efejiro Ashano, Hocine Bendou, Gerrit Botha, Emile R. Chimusa, Ananyo Choudhury, Ravikiran Donthu, Jenny Drnevich, Oluwadamilare Falola, Christopher J. Fields, Scott Hazelhurst, Liesl Hendry, Itunuoluwa Isewon, Radhika S. Khetani, Judit Kumuthini, Magambo Phillip Kimuda, Lerato E. Magosi, Liudmila S. Mainzer, Suresh Maslamoney, Mamana Mbiyavanga, Ayton Meintjes, Danny Mugutso, Phelelani T. Mpangase, Richard Munthali, Victoria Nembaware, Andrew Ndhlovu, Trust Odia, Adaobi Okafor, Olaleye Oladipo, Sumir Panji, Venesa Pillay, Gloria Rendon, Dhriti Sengupta, Nicola J. Mulder:
Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network. PLoS Comput. Biol. 13(6) (2017)
Conference and Workshop Papers
- 2016
- [c1]Subho S. Banerjee, Arjun P. Athreya, Liudmila S. Mainzer, C. Victor Jongeneel, Wen-mei W. Hwu, Zbigniew T. Kalbarczyk, Ravishankar K. Iyer:
Efficient and Scalable Workflows for Genomic Analyses. DIDC@HPDC 2016: 27-36
Coauthor Index
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