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Bogdan Pasaniuc
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2020 – today
- 2023
- [j25]Xinran Wang
, Zeyun Lu
, Arjun Bhattacharya, Bogdan Pasaniuc, Nicholas Mancuso
:
twas_sim, a Python-based tool for simulation and power analysis of transcriptome-wide association analysis. Bioinform. 39(5) (2023) - 2021
- [j24]Arunabha Majumdar
, Kathryn S. Burch, Tanushree Haldar, Sriram Sankararaman, Bogdan Pasaniuc, W. James Gauderman, John S. Witte:
A two-step approach to testing overall effect of gene-environment interaction for multiple phenotypes. Bioinform. 36(24): 5640-5648 (2021) - [j23]Filipp Rondel
, Roya Hosseini
, Bikram Sahoo, Sergey Knyazev, Igor Mandric, Frank Stewart, Ion I. Mandoiu, Bogdan Pasaniuc, Yuri Porozov
, Alexander Zelikovsky
:
Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data. J. Comput. Biol. 28(8): 842-855 (2021) - [j22]Arunabha Majumdar
, Claudia Giambartolomei
, Na Cai
, Tanushree Haldar
, Tommer Schwarz
, Michael J. Gandal
, Jonathan Flint
, Bogdan Pasaniuc:
Leveraging eQTLs to identify individual-level tissue of interest for a complex trait. PLoS Comput. Biol. 17(5) (2021) - [j21]Ruth Johnson
, Kathryn S. Burch
, Kangcheng Hou
, Mario Paciuc, Bogdan Pasaniuc
, Sriram Sankararaman
:
Estimation of regional polygenicity from GWAS provides insights into the genetic architecture of complex traits. PLoS Comput. Biol. 17(10) (2021) - [c10]Kritika Singh, Gita Pathak, Tyne Miller-Flemming, Frank Wendt, Nava Ehsan, Kangcheng Hou, Ruth Johnson, Zeyun Lu, Shyamalika Gopalan, Loic Yang, Pejman Mohammadi, Bogdan Pasaniuc, Renato Polimanti, Lea Davis, Nicholas Mancuso:
Integrative Analyses Identify Susceptibility Genes Underlying COVID-19 Hospitalization. AMIA 2021 - 2020
- [c9]Filipp Rondel, Akram Sadat Hosseini
, Bikram Sahoo, Sergey Knyazev
, Igor Mandric, Frank Stewart, Ion I. Mandoiu, Bogdan Pasaniuc, Alex Zelikovsky
:
Estimating Enzyme Participation in Metabolic Pathways for Microbial Communities from RNA-seq Data. ISBRA 2020: 335-343 - [c8]Ruth Johnson, Kathryn S. Burch, Kangcheng Hou, Mario Paciuc, Bogdan Pasaniuc, Sriram Sankararaman:
A Scalable Method for Estimating the Regional Polygenicity of Complex Traits. RECOMB 2020: 253-254
2010 – 2019
- 2019
- [j20]Hanna Julienne
, Huwenbo Shi, Bogdan Pasaniuc, Hugues Aschard:
RAISS: robust and accurate imputation from summary statistics. Bioinform. 35(22): 4837-4839 (2019) - [c7]Ali Pazokitoroudi, Yue Wu, Kathryn S. Burch, Kangcheng Hou, Bogdan Pasaniuc, Sriram Sankararaman:
Scalable Multi-component Linear Mixed Models with Application to SNP Heritability Estimation. RECOMB 2019: 312-313 - 2018
- [j19]Ruth Johnson, Huwenbo Shi, Bogdan Pasaniuc, Sriram Sankararaman:
A unifying framework for joint trait analysis under a non-infinitesimal model. Bioinform. 34(13): i195-i201 (2018) - [j18]Claudia Giambartolomei
, Jimmy Zhenli Liu, Wen Zhang, Mads Hauberg
, Huwenbo Shi, James Boocock
, Joe Pickrell, Andrew E. Jaffe
, The CommonMind Consortium, Bogdan Pasaniuc
, Panos Roussos:
A Bayesian framework for multiple trait colocalization from summary association statistics. Bioinform. 34(15): 2538-2545 (2018) - 2017
- [j17]Gleb Kichaev, Megan Roytman, Ruth Johnson, Eleazar Eskin, Sara Lindström, Peter Kraft
, Bogdan Pasaniuc
:
Improved methods for multi-trait fine mapping of pleiotropic risk loci. Bioinform. 33(2): 248-255 (2017) - [j16]Robert Brown, Gleb Kichaev, Nicholas Mancuso, James Boocock
, Bogdan Pasaniuc
:
Enhanced methods to detect haplotypic effects on gene expression. Bioinform. 33(15): 2307-2313 (2017) - 2015
- [j15]Farhad Hormozdiari, Gleb Kichaev, Wen-Yun Yang, Bogdan Pasaniuc
, Eleazar Eskin:
Identification of causal genes for complex traits. Bioinform. 31(12): 206-213 (2015) - [j14]Huwenbo Shi, Bogdan Pasaniuc
, Kenneth L. Lange:
A multivariate Bernoulli model to predict DNaseI hypersensitivity status from haplotype data. Bioinform. 31(21): 3514-3521 (2015) - [j13]Wen-Yun Yang, Farhad Hormozdiari, Eleazar Eskin, Bogdan Pasaniuc
:
A Spatial Haplotype Copying Model with Applications to Genotype Imputation. J. Comput. Biol. 22(5): 451-462 (2015) - 2014
- [j12]Bogdan Pasaniuc
, Noah Zaitlen, Huwenbo Shi, Gaurav Bhatia, Alexander Gusev, Joseph Pickrell, Joel Hirschhorn, David P. Strachan, Nick Patterson, Alkes L. Price:
Fast and accurate imputation of summary statistics enhances evidence of functional enrichment. Bioinform. 30(20): 2906-2914 (2014) - [j11]Robert Brown, Bogdan Pasaniuc
:
Enhanced Methods for Local Ancestry Assignment in Sequenced Admixed Individuals. PLoS Comput. Biol. 10(4) (2014) - [c6]Farhad Hormozdiari, Emrah Kostem, Eun Yong Kang, Bogdan Pasaniuc, Eleazar Eskin:
Identifying causal variants at loci with multiple signals of association. BCB 2014: 610-611 - [c5]Wen-Yun Yang, Farhad Hormozdiari, Eleazar Eskin, Bogdan Pasaniuc:
A Spatial-Aware Haplotype Copying Model with Applications to Genotype Imputation. RECOMB 2014: 371-384 - 2013
- [j10]Bogdan Pasaniuc
, Sriram Sankararaman, Dara G. Torgerson, Christopher Gignoux, Noah Zaitlen, Celeste Eng, William Rodriguez-Cintron, Rocio Chapela, Jean G. Ford, Pedro C. Avila, Jose Rodriguez-Santana, Gary K. Chen, Loic Le Marchand, Brian E. Henderson, David Reich, Christopher A. Haiman, Esteban Gonzàlez Burchard, Eran Halperin:
Analysis of Latino populations from GALA and MEC studies reveals genomic loci with biased local ancestry estimation. Bioinform. 29(11): 1407-1415 (2013) - [j9]Wen-Yun Yang, Farhad Hormozdiari, Zhanyong Wang, Dan He, Bogdan Pasaniuc
, Eleazar Eskin:
Leveraging reads that span multiple single nucleotide polymorphisms for haplotype inference from sequencing data. Bioinform. 29(18): 2245-2252 (2013) - 2012
- [j8]Yael Baran, Bogdan Pasaniuc
, Sriram Sankararaman, Dara G. Torgerson, Christopher Gignoux, Celeste Eng, William Rodriguez-Cintron, Rocio Chapela, Jean G. Ford, Pedro C. Avila, Jose Rodriguez-Santana, Esteban Gonzàlez Burchard, Eran Halperin:
Fast and accurate inference of local ancestry in Latino populations. Bioinform. 28(10): 1359-1367 (2012) - [j7]Noah Zaitlen, Bogdan Pasaniuc
, Nick Patterson, Samuela Pollack, Benjamin Voight
, Leif Groop, David Altshuler
, Brian E. Henderson, Laurence N. Kolonel, Loic Le Marchand, Kevin Waters, Christopher A. Haiman, Barbara E. Stranger
, Emmanouil T. Dermitzakis, Peter Kraft, Alkes L. Price:
Analysis of case-control association studies with known risk variants. Bioinform. 28(13): 1729-1737 (2012) - 2011
- [j6]Dan He, Noah Zaitlen, Bogdan Pasaniuc
, Eleazar Eskin, Eran Halperin:
Genotyping common and rare variation using overlapping pool sequencing. BMC Bioinform. 12(S-6): S2 (2011) - [j5]Bogdan Pasaniuc, Robert S. Garfinkel, Ion I. Mandoiu, Alexander Zelikovsky
:
Optimal Testing of Digital Microfluidic Biochips. INFORMS J. Comput. 23(4): 518-529 (2011) - [j4]Bogdan Pasaniuc
, Noah Zaitlen, Eran Halperin:
Accurate Estimation of Expression Levels of Homologous Genes in RNA-seq Experiments. J. Comput. Biol. 18(3): 459-468 (2011) - 2010
- [c4]Bogdan Pasaniuc, Noah Zaitlen, Eran Halperin:
Accurate Estimation of Expression Levels of Homologous Genes in RNA-seq Experiments. RECOMB 2010: 397-409
2000 – 2009
- 2009
- [j3]Bogdan Pasaniuc
, Sriram Sankararaman, Gad Kimmel, Eran Halperin:
Inference of locus-specific ancestry in closely related populations. Bioinform. 25(12) (2009) - [c3]Bogdan Pasaniuc, Justin Kennedy, Ion I. Mandoiu
:
Imputation-Based Local Ancestry Inference in Admixed Populations. ISBRA 2009: 221-233 - [i1]Justin Kennedy, Ion I. Mandoiu, Bogdan Pasaniuc:
GEDI: Scalable Algorithms for Genotype Error Detection and Imputation. CoRR abs/0911.1765 (2009) - 2008
- [j2]Justin Kennedy, Ion I. Mandoiu
, Bogdan Pasaniuc
:
Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity. J. Comput. Biol. 15(9): 1155-1171 (2008) - [j1]Alexander Gusev, Ion I. Mandoiu
, Bogdan Pasaniuc
:
Highly Scalable Genotype Phasing by Entropy Minimization. IEEE ACM Trans. Comput. Biol. Bioinform. 5(2): 252-261 (2008) - 2007
- [c2]Justin Kennedy, Ion I. Mandoiu, Bogdan Pasaniuc:
Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity. WABI 2007: 73-84 - 2006
- [c1]Bogdan Pasaniuc
, Ion I. Mandoiu
:
Highly Scalable Genotype Phasing by Entropy Minimization. EMBC 2006: 3482-3486
Coauthor Index
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last updated on 2024-04-29 21:25 CEST by the dblp team
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