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Paul F. Jaeger – Paul Jäger – Paul F. Jäger
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Books and Theses
- 2020
[b1]Paul Jaeger:
Challenges and Opportunities of End-to-End Learning in Medical Image Classification. Karlsruhe University, Germany, 2020
Journal Articles
- 2023
- [j5]Patrick Bilic, Patrick Ferdinand Christ, Hongwei Li
, Eugene Vorontsov, Avi Ben-Cohen, Georgios Kaissis, Adi Szeskin, Colin Jacobs, Gabriel Efrain Humpire Mamani, Gabriel Chartrand, Fabian Lohöfer, Julian Walter Holch, Wieland H. Sommer, Felix Hofmann, Alexandre Hostettler, Naama Lev-Cohain, Michal Drozdzal, Michal Marianne Amitai, Refael Vivanti, Jacob Sosna, Ivan Ezhov, Anjany Sekuboyina, Fernando Navarro, Florian Kofler, Johannes C. Paetzold, Suprosanna Shit, Xiaobin Hu, Jana Lipková, Markus Rempfler, Marie Piraud, Jan Kirschke, Benedikt Wiestler, Zhiheng Zhang, Christian Hülsemeyer, Marcel Beetz, Florian Ettlinger, Michela Antonelli, Woong Bae, Miriam Bellver, Lei Bi, Hao Chen, Grzegorz Chlebus, Erik B. Dam, Qi Dou, Chi-Wing Fu, Bogdan Georgescu, Xavier Giró-i-Nieto, Felix Grün, Xu Han, Pheng-Ann Heng, Jürgen Hesser, Jan Hendrik Moltz, Christian Igel, Fabian Isensee, Paul Jäger, Fucang Jia, Krishna Chaitanya Kaluva, Mahendra Khened, Ildoo Kim, Jae-Hun Kim, Sungwoong Kim, Simon Kohl, Tomasz K. Konopczynski, Avinash Kori, Ganapathy Krishnamurthi, Fan Li, Hongchao Li, Junbo Li, Xiaomeng Li, John S. Lowengrub, Jun Ma, Klaus H. Maier-Hein, Kevis-Kokitsi Maninis, Hans Meine, Dorit Merhof, Akshay Pai, Mathias Perslev, Jens Petersen, Jordi Pont-Tuset, Jin Qi, Xiaojuan Qi, Oliver Rippel, Karsten Roth, Ignacio Sarasua, Andrea Schenk, Zengming Shen, Jordi Torres, Christian Wachinger, Chunliang Wang, Leon Weninger, Jianrong Wu, Daguang Xu, Xiaoping Yang, Simon Chun-Ho Yu, Yading Yuan, Miao Yue, Liping Zhang, Manuel Jorge Cardoso, Spyridon Bakas, Rickmer Braren, Volker Heinemann, Christopher Pal, An Tang, Samuel Kadoury, Luc Soler, Bram van Ginneken, Hayit Greenspan, Leo Joskowicz, Bjoern H. Menze:
The Liver Tumor Segmentation Benchmark (LiTS). Medical Image Anal. 84: 102680 (2023) - [j4]Malte Jacobsen, Rahil Gholamipoor, Till Anselm Dembek, Pauline Rottmann, Marlo Verket, Julia Brandts, Paul Jäger, Ben-Niklas Baermann, Mustafa Kondakci, Lutz Heinemann, Anna L. Gerke, Nikolaus Marx, Dirk Müller-Wieland, Kathrin Möllenhoff, Melchior Seyfarth, Markus Kollmann, Guido Kobbe:
Wearable based monitoring and self-supervised contrastive learning detect clinical complications during treatment of Hematologic malignancies. npj Digit. Medicine 6 (2023) - 2022
- [j3]David Zimmerer, Peter M. Full, Fabian Isensee, Paul Jäger, Tim Adler, Jens Petersen, Gregor Köhler, Tobias Roß, Annika Reinke, Antanas Kascenas, Bjørn Sand Jensen, Alison Q. O'Neil, Jeremy Tan, Benjamin Hou, James Batten, Huaqi Qiu, Bernhard Kainz, Nina Shvetsova, Irina Fedulova, Dmitry V. Dylov, Baolun Yu, Jianyang Zhai, Jingtao Hu, Runxuan Si, Sihang Zhou, Siqi Wang, Xinyang Li, Xuerun Chen, Yang Zhao, Sergio Naval Marimont, Giacomo Tarroni, Victor Saase, Lena Maier-Hein, Klaus H. Maier-Hein:
MOOD 2020: A Public Benchmark for Out-of-Distribution Detection and Localization on Medical Images. IEEE Trans. Medical Imaging 41(10): 2728-2738 (2022) - 2021
- [j2]Kimberley M. Timmins, Irene C. van der Schaaf, Edwin Bennink, Ynte M. Ruigrok, Xingle An, Michael Baumgartner, Pascal Bourdon, Riccardo de Feo, Tommaso Di Noto, Florian Dubost, Augusto Fava-Sanches, Xue Feng, Corentin Giroud, Inteneural Group, Minghui Hu, Paul F. Jaeger, Juhana Kaiponen, Michal Klimont, Yuexiang Li, Hongwei Li, Yi Lin, Timo Loehr, Jun Ma, Klaus H. Maier-Hein, Guillaume Marie, Bjoern H. Menze, Jonas Richiardi, Saifeddine Rjiba, Dhaval Shah, Suprosanna Shit, Jussi Tohka, Thierry Urruty, Urszula Walinska, Xiaoping Yang, Yunqiao Yang, Yin Yin, Birgitta K. Velthuis, Hugo J. Kuijf:
Comparing methods of detecting and segmenting unruptured intracranial aneurysms on TOF-MRAS: The ADAM challenge. NeuroImage 238: 118216 (2021) - 2018
- [j1]Olivier Bernard, Alain Lalande, Clément Zotti, Frederic Cervenansky, Xin Yang, Pheng-Ann Heng, Irem Cetin, Karim Lekadir, Oscar Camara, Miguel Ángel González Ballester, Gerard Sanroma, Sandy Napel, Steffen E. Petersen, Georgios Tziritas, Elias Grinias, Mahendra Khened, Alex Varghese, Ganapathy Krishnamurthi, Marc-Michel Rohé, Xavier Pennec, Maxime Sermesant, Fabian Isensee, Paul Jaeger, Klaus H. Maier-Hein, Peter M. Full, Ivo Wolf, Sandy Engelhardt, Christian F. Baumgartner, Lisa M. Koch, Jelmer M. Wolterink, Ivana Isgum, Yeonggul Jang, Yoonmi Hong, Jay Patravali, Shubham Jain, Olivier Humbert, Pierre-Marc Jodoin:
Deep Learning Techniques for Automatic MRI Cardiac Multi-Structures Segmentation and Diagnosis: Is the Problem Solved? IEEE Trans. Medical Imaging 37(11): 2514-2525 (2018)
Conference and Workshop Papers
- 2024
- [c38]Saikat Roy, Gregor Köhler, Michael Baumgartner, Constantin Ulrich, Fabian Isensee, Paul F. Jaeger, Klaus H. Maier-Hein:
Abstract: 3D Medical Image Segmentation with Transformer-based Scaling of ConvNets - MedNeXt. Bildverarbeitung für die Medizin 2024: 79 - [c37]Till J. Bungert, Levin Kobelke, Paul F. Jaeger:
Abstract: Understanding Silent Failures in Medical Image Classification. Bildverarbeitung für die Medizin 2024: 100 - [c36]Balint Kovacs, Nils Netzer, Michael Baumgartner, Carolin Eith, Dimitrios Bounias, Clara Meinzer, Paul F. Jäger, Kevin S. Zhang, Ralf Floca, Adrian Schrader, Fabian Isensee, Regula Gnirs, Magdalena Görtz, Viktoria Schütz, Albrecht Stenzinger, Markus Hohenfellner, Heinz-Peter Schlemmer, Ivo Wolf, David Bonekamp, Klaus H. Maier-Hein:
Abstract: Anatomy-informed Data Augmentation for Enhanced Prostate Cancer Detection. Bildverarbeitung für die Medizin 2024: 114 - [c35]Silvia Dias Almeida, Carsten T. Lüth, Tobias Norajitra, Tassilo Wald, Marco Nolden, Paul F. Jäger, Claus Peter Heussel, Jürgen Biederer, Oliver Weinheimer, Klaus H. Maier-Hein:
Abstract: Reformulating COPD Classification on Chest CT Scans as Anomaly Detection using Contrastive Representations - cOOpD. Bildverarbeitung für die Medizin 2024: 115 - [c34]Gregor Köhler, Tassilo Wald, Constantin Ulrich, David Zimmerer, Paul F. Jaeger, Jörg K. H. Franke, Simon Kohl, Fabian Isensee, Klaus H. Maier-Hein:
Abstract: RecycleNet - Latent Feature Recycling Leads to Iterative Decision Refinement. Bildverarbeitung für die Medizin 2024: 219 - [c33]Dimitrios Bounias, Michael Baumgartner, Peter Neher, Balint Kovacs, Ralf Floca, Paul F. Jaeger, Lorenz A. Kapsner, Jessica Eberle, Dominique Hadler, Frederik B. Laun, Sabine Ohlmeyer, Klaus H. Maier-Hein, Sebastian Bickelhaupt:
Abstract: Object Detection for Breast Diffusion-weighted Imaging. Bildverarbeitung für die Medizin 2024: 334 - [c32]Gregor Köhler, Tassilo Wald, Constantin Ulrich, David Zimmerer, Paul F. Jaeger, Jörg K. H. Franke, Simon Kohl, Fabian Isensee, Klaus H. Maier-Hein:
RecycleNet: Latent Feature Recycling Leads to Iterative Decision Refinement. WACV 2024: 799-807 - 2023
- [c31]Carsten T. Lüth, David Zimmerer, Gregor Köhler, Paul F. Jaeger, Fabian Isensee, Klaus H. Maier-Hein:
Contrastive Representations for Unsupervised Anomaly Detection and Localization. Bildverarbeitung für die Medizin 2023: 246-252 - [c30]David Zimmerer, Peter M. Full, Fabian Isensee, Paul Jäger, Tim Adler, Jens Petersen, Gregor Köhler, Tobias Roß, Annika Reinke, Antanas Kascenas, Bjørn Sand Jensen, Alison Q. O'Neil, Jeremy Tan, Benjamin Hou, James Batten, Huaqi Qiu, Bernhard Kainz, Nina Shvetsova, Irina Fedulova, Dmitry V. Dylov, Baolun Yu, Jianyang Zhai, Jingtao Hu, Runxuan Si, Sihang Zhou, Siqi Wang, Xinyang Li, Xuerun Chen, Yang Zhao, Sergio Naval Marimont, Giacomo Tarroni, Victor Saase, Lena Maier-Hein, Klaus H. Maier-Hein:
Abstract: MOOD 2020 - A Public Benchmark for Out-of-distribution Detection and Localization on Medical Images. Bildverarbeitung für die Medizin 2023: 312 - [c29]Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, A. Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, Jonathan Rafael-Patino, Vivek Singh Bawa, Stefanie Speidel, Carole H. Sudre, Kimberlin M. H. van Wijnen, Martin Wagner, D. Wei, Amine Yamlahi, Moi Hoon Yap, C. Yuan, Maximilian Zenk, A. Zia, David Zimmerer, Dogu Baran Aydogan, Binod Bhattarai, Louise Bloch, Raphael Brüngel, J. Cho, C. Choi, Q. Dou, Ivan Ezhov, Christoph M. Friedrich, C. Fuller, Rebati Raman Gaire, Adrian Galdran, Álvaro García-Faura, Maria Grammatikopoulou, S. Hong, Mostafa Jahanifar, I. Jang, Abdolrahim Kadkhodamohammadi, I. Kang, Florian Kofler, S. Kondo, Hugo Jaco Kuijf, M. Li, M. Luu, Tomaz Martincic, Pedro Morais, Mohamed A. Naser, Bruno Oliveira, David Owen, S. Pang, J. Park, S. Park, Szymon Plotka, Élodie Puybareau, Nasir M. Rajpoot, K. Ryu, Numan Saeed, Adam Shephard, Pengcheng Shi, Dejan Stepec, Ronast Subedi, Guillaume Tochon, Helena R. Torres, Hélène Urien, João L. Vilaça, Kareem A. Wahid, H. Wang, J. Wang, L. Wang, X. Wang, Benedikt Wiestler, Marek Wodzinski, F. Xia, J. Xie, Z. Xiong, S. Yang, Y. Yang, Z. Zhao, Klaus H. Maier-Hein, Paul F. Jäger, Annette Kopp-Schneider, Lena Maier-Hein:
Why is the Winner the Best? CVPR 2023: 19955-19966 - [c28]Brian Wentz, Sparsh Paliwal, Ursula Gorham-Oscilowski, Paul Jaeger, Jonathan Lazar:
Evaluating the Accessibility of Digital Government Services for Family Law in the U.S. during the COVID-19 Pandemic. HICSS 2023: 1849-1858 - [c27]Paul F. Jaeger, Carsten T. Lüth, Lukas Klein, Till J. Bungert:
A Call to Reflect on Evaluation Practices for Failure Detection in Image Classification. ICLR 2023 - [c26]Silvia Dias Almeida, Carsten T. Lüth, Tobias Norajitra, Tassilo Wald, Marco Nolden, Paul F. Jäger, Claus Peter Heussel, Jürgen Biederer, Oliver Weinheimer, Klaus H. Maier-Hein:
cOOpD: Reformulating COPD Classification on Chest CT Scans as Anomaly Detection Using Contrastive Representations. MICCAI (5) 2023: 33-43 - [c25]Patrick Godau, Piotr Kalinowski, Evangelia Christodoulou, Annika Reinke, Minu Tizabi, Luciana Ferrer, Paul F. Jäger, Lena Maier-Hein:
Deployment of Image Analysis Algorithms Under Prevalence Shifts. MICCAI (3) 2023: 389-399 - [c24]Till J. Bungert, Levin Kobelke, Paul F. Jäger:
Understanding Silent Failures in Medical Image Classification. MICCAI (3) 2023: 400-410 - [c23]Saikat Roy, Gregor Köhler, Constantin Ulrich, Michael Baumgartner, Jens Petersen, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
MedNeXt: Transformer-Driven Scaling of ConvNets for Medical Image Segmentation. MICCAI (4) 2023: 405-415 - [c22]Balint Kovacs, Nils Netzer, Michael Baumgartner, Carolin Eith, Dimitrios Bounias, Clara Meinzer, Paul F. Jäger, Kevin S. Zhang, Ralf Floca, Adrian Schrader, Fabian Isensee, Regula Gnirs, Magdalena Goertz, Viktoria Schuetz, Albrecht Stenzinger, Markus Hohenfellner, Heinz-Peter Schlemmer, Ivo Wolf, David Bonekamp, Klaus H. Maier-Hein:
Anatomy-Informed Data Augmentation for Enhanced Prostate Cancer Detection. MICCAI (7) 2023: 531-540 - [c21]Carsten T. Lüth, Till J. Bungert, Lukas Klein, Paul Jaeger:
Navigating the Pitfalls of Active Learning Evaluation: A Systematic Framework for Meaningful Performance Assessment. NeurIPS 2023 - 2022
- [c20]Michael Baumgartner, Paul F. Jäger, Fabian Isensee, Klaus H. Maier-Hein:
Abstract: nnDetection - A Self-configuring Method for Medical Object Detection. Bildverarbeitung für die Medizin 2022: 50 - [c19]Maximilian Zenk, David Zimmerer, Fabian Isensee, Paul F. Jäger, Jakob Wasserthal, Klaus H. Maier-Hein:
Realistic Evaluation of FixMatch on Imbalanced Medical Image Classification Tasks. Bildverarbeitung für die Medizin 2022: 291-296 - [c18]Amine Yamlahi, Patrick Godau, Thuy Nuong Tran, Lucas-Raphael Muller, Tim Adler, Minu Tizabi, Michael Baumgartner, Paul Jäger, Lena Maier-Hein:
Heterogeneous Model Ensemble For Automatic Polyp Detection and Tracking In Colonoscopy. EndoCV@ISBI 2022: 25-28 - [c17]Lukas Klein, João B. S. Carvalho, Mennatallah El-Assady, Paolo Penna, Joachim M. Buhmann, Paul F. Jaeger:
Improving Explainability of Disentangled Representations using Multipath-Attribution Mappings. MIDL 2022: 689-712 - 2021
- [c16]Peter M. Full, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
Abstract: Studying Robustness of Semantic Segmentation under Domain Shift in Cardiac MRI. Bildverarbeitung für die Medizin 2021: 269 - [c15]Jens Petersen, Fabian Isensee, Gregor Köhler, Paul F. Jäger, David Zimmerer, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Vollmuth, Klaus H. Maier-Hein:
Continuous-Time Deep Glioma Growth Models. MICCAI (3) 2021: 83-92 - [c14]Michael Baumgartner, Paul F. Jäger, Fabian Isensee, Klaus H. Maier-Hein:
nnDetection: A Self-configuring Method for Medical Object Detection. MICCAI (5) 2021: 530-539 - [c13]Jens Petersen, Gregor Köhler, David Zimmerer, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
GP-ConvCNP: Better generalization for conditional convolutional Neural Processes on time series data. UAI 2021: 939-949 - 2020
- [c12]Jens Petersen, Paul F. Jäger, Fabian Isensee, Simon A. A. Kohl, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Kickingereder, Klaus H. Maier-Hein:
Abstract: Deep Probabilistic Modeling of Glioma Growth. Bildverarbeitung für die Medizin 2020: 215 - [c11]Fabian Isensee, Paul F. Jäger, Peter M. Full, Philipp Vollmuth, Klaus H. Maier-Hein:
nnU-Net for Brain Tumor Segmentation. BrainLes@MICCAI (2) 2020: 118-132 - [c10]Peter M. Full, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
Studying Robustness of Semantic Segmentation Under Domain Shift in Cardiac MRI. M&Ms and EMIDEC/STACOM@MICCAI 2020: 238-249 - 2019
- [c9]Fabian Isensee, Jens Petersen, André Klein, David Zimmerer, Paul F. Jaeger, Simon Kohl, Jakob Wasserthal, Gregor Köhler, Tobias Norajitra, Sebastian J. Wirkert, Klaus H. Maier-Hein:
Abstract: nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation. Bildverarbeitung für die Medizin 2019: 22 - [c8]Gregor N. Ramien, Paul F. Jaeger, Simon A. A. Kohl, Klaus H. Maier-Hein:
Reg R-CNN: Lesion Detection and Grading Under Noisy Labels. UNSURE/CLIP@MICCAI 2019: 33-41 - [c7]Jens Petersen, Paul F. Jäger, Fabian Isensee, Simon A. A. Kohl, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Kickingereder, Klaus H. Maier-Hein:
Deep Probabilistic Modeling of Glioma Growth. MICCAI (2) 2019: 806-814 - [c6]Paul F. Jaeger, Simon A. A. Kohl, Sebastian Bickelhaupt, Fabian Isensee, Tristan Anselm Kuder, Heinz-Peter Schlemmer, Klaus H. Maier-Hein:
Retina U-Net: Embarrassingly Simple Exploitation of Segmentation Supervision for Medical Object Detection. ML4H@NeurIPS 2019: 171-183 - 2018
- [c5]Paul Jäger, Fabian Isensee, Jens Petersen, David Zimmerer, Jakob Wasserthal, Klaus Hermann Maier-Hein:
Advanced Deep Learning Methods. Bildverarbeitung für die Medizin 2018: 6 - [c4]Paul Jaeger, Sebastian Bickelhaupt, Frederik Bernd Laun, Wolfgang Lederer, Daniel Heidi, Tristan Anselm Kuder, Daniel Paech, David Bonekamp, Alexander Radbruch, Stefan Delorme, Heinz-Peter Schlemmer, Franziska Steudle, Klaus Hermann Maier-Hein:
Abstract: Revealing Hidden Potentials of the q-Space Signal in Breast Cancer. Bildverarbeitung für die Medizin 2018: 73 - [c3]Jennifer Kamphenkel, Paul F. Jäger, Sebastian Bickelhaupt, Frederik Bernd Laun, Wolfgang Lederer, Heidi Daniel, Tristan Anselm Kuder, Stefan Delorme, Heinz-Peter Schlemmer, Franziska König, Klaus H. Maier-Hein:
Domain Adaptation for Deviating Acquisition Protocols in CNN-Based Lesion Classification on Diffusion-Weighted MR Images. RAMBO+BIA+TIA@MICCAI 2018: 73-80 - 2017
- [c2]Fabian Isensee, Paul F. Jaeger, Peter M. Full, Ivo Wolf, Sandy Engelhardt, Klaus H. Maier-Hein:
Automatic Cardiac Disease Assessment on cine-MRI via Time-Series Segmentation and Domain Specific Features. STACOM@MICCAI 2017: 120-129 - [c1]Paul Jaeger, Sebastian Bickelhaupt, Frederik Bernd Laun, Wolfgang Lederer, Daniel Heidi, Tristan Anselm Kuder, Daniel Paech, David Bonekamp, Alexander Radbruch, Stefan Delorme, Heinz-Peter Schlemmer, Franziska Steudle, Klaus H. Maier-Hein:
Revealing Hidden Potentials of the q-Space Signal in Breast Cancer. MICCAI (1) 2017: 664-671
Informal and Other Publications
- 2024
- [i33]Kim-Celine Kahl, Carsten T. Lüth, Maximilian Zenk, Klaus H. Maier-Hein, Paul F. Jaeger:
ValUES: A Framework for Systematic Validation of Uncertainty Estimation in Semantic Segmentation. CoRR abs/2401.08501 (2024) - [i32]Stefan Denner, David Zimmerer, Dimitrios Bounias, Markus Bujotzek, Shuhan Xiao, Lisa Kausch, Philipp Schader, Tobias Penzkofer, Paul F. Jäger, Klaus H. Maier-Hein:
Leveraging Foundation Models for Content-Based Medical Image Retrieval in Radiology. CoRR abs/2403.06567 (2024) - [i31]Karol Gotkowski, Carsten T. Lüth, Paul F. Jäger, Sebastian Ziegler, Lars Krämer, Stefan Denner, Shuhan Xiao, Nico Disch, Klaus H. Maier-Hein, Fabian Isensee:
Embarrassingly Simple Scribble Supervision for 3D Medical Segmentation. CoRR abs/2403.12834 (2024) - 2023
- [i30]Carsten T. Lüth, David Zimmerer, Gregor Köhler, Paul F. Jaeger, Fabian Isensee, Jens Petersen, Klaus H. Maier-Hein:
CRADL: Contrastive Representations for Unsupervised Anomaly Detection and Localization. CoRR abs/2301.02126 (2023) - [i29]Carsten T. Lüth, Till J. Bungert, Lukas Klein, Paul F. Jaeger:
Toward Realistic Evaluation of Deep Active Learning Algorithms in Image Classification. CoRR abs/2301.10625 (2023) - [i28]Annika Reinke, Minu Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M. Rafelski, Nasir M. Rajpoot, Mauricio Reyes, Michael A. Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I. Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel A. Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Manuel Wiesenfarth, Ziv R. Yaniv, Paul F. Jäger, Lena Maier-Hein:
Understanding metric-related pitfalls in image analysis validation. CoRR abs/2302.01790 (2023) - [i27]Saikat Roy, Gregor Köhler, Constantin Ulrich, Michael Baumgartner, Jens Petersen, Fabian Isensee, Paul F. Jaeger, Klaus H. Maier-Hein:
MedNeXt: Transformer-driven Scaling of ConvNets for Medical Image Segmentation. CoRR abs/2303.09975 (2023) - [i26]Patrick Godau, Piotr Kalinowski, Evangelia Christodoulou, Annika Reinke, Minu Tizabi, Luciana Ferrer, Paul Jäger, Lena Maier-Hein:
Deployment of Image Analysis Algorithms under Prevalence Shifts. CoRR abs/2303.12540 (2023) - [i25]Lukas Klein, João B. S. Carvalho, Mennatallah El-Assady, Paolo Penna, Joachim M. Buhmann, Paul F. Jaeger:
Improving Explainability of Disentangled Representations using Multipath-Attribution Mappings. CoRR abs/2306.09035 (2023) - [i24]Silvia Dias Almeida, Carsten T. Lüth, Tobias Norajitra, Tassilo Wald, Marco Nolden, Paul F. Jaeger, Claus Peter Heussel, Jürgen Biederer, Oliver Weinheimer, Klaus H. Maier-Hein:
cOOpD: Reformulating COPD classification on chest CT scans as anomaly detection using contrastive representations. CoRR abs/2307.07254 (2023) - [i23]Till J. Bungert, Levin Kobelke, Paul F. Jaeger:
Understanding Silent Failures in Medical Image Classification. CoRR abs/2307.14729 (2023) - [i22]Balint Kovacs, Nils Netzer, Michael Baumgartner, Carolin Eith, Dimitrios Bounias, Clara Meinzer, Paul F. Jaeger, Kevin S. Zhang, Ralf Floca, Adrian Schrader, Fabian Isensee, Regula Gnirs, Magdalena Goertz, Viktoria Schuetz, Albrecht Stenzinger, Markus Hohenfellner, Heinz-Peter Schlemmer, Ivo Wolf, David Bonekamp, Klaus H. Maier-Hein:
Anatomy-informed Data Augmentation for Enhanced Prostate Cancer Detection. CoRR abs/2309.03652 (2023) - [i21]Gregor Köhler, Tassilo Wald, Constantin Ulrich, David Zimmerer, Paul F. Jaeger, Jörg K. H. Franke, Simon Kohl, Fabian Isensee, Klaus H. Maier-Hein:
RecycleNet: Latent Feature Recycling Leads to Iterative Decision Refinement. CoRR abs/2309.07513 (2023) - [i20]Tim J. Adler, Jan-Hinrich Nölke, Annika Reinke, Minu Dietlinde Tizabi, Sebastian Gruber, Dasha Trofimova, Lynton Ardizzone, Paul F. Jaeger, Florian Büttner, Ullrich Köthe, Lena Maier-Hein:
Application-driven Validation of Posteriors in Inverse Problems. CoRR abs/2309.09764 (2023) - [i19]Zdravko Marinov, Paul F. Jäger, Jan Egger, Jens Kleesiek, Rainer Stiefelhagen:
Deep Interactive Segmentation of Medical Images: A Systematic Review and Taxonomy. CoRR abs/2311.13964 (2023) - 2022
- [i18]Lena Maier-Hein, Annika Reinke, Evangelia Christodoulou, Ben Glocker, Patrick Godau, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Minu Dietlinde Tizabi, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Peter Bankhead, Arriel Benis, M. Jorge Cardoso, Veronika Cheplygina, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Bram van Ginneken, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Annette Kopp-Schneider, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, David Moher, Karel G. M. Moons, Henning Müller, Felix Nickel, Brennan Nichyporuk, Jens Petersen, Nasir M. Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clarisa Sánchez Gutiérrez, Shravya Shetty, Maarten van Smeden, Carole H. Sudre, Ronald M. Summers, Abdel A. Taha, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger:
Metrics reloaded: Pitfalls and recommendations for image analysis validation. CoRR abs/2206.01653 (2022) - [i17]Lukas Klein, Mennatallah El-Assady, Paul F. Jäger:
From Correlation to Causation: Formalizing Interpretable Machine Learning as a Statistical Process. CoRR abs/2207.04969 (2022) - [i16]M. Jorge Cardoso, Wenqi Li, Richard Brown, Nic Ma, Eric Kerfoot, Yiheng Wang, Benjamin Murray, Andriy Myronenko, Can Zhao, Dong Yang, Vishwesh Nath, Yufan He, Ziyue Xu, Ali Hatamizadeh, Wentao Zhu, Yun Liu, Mingxin Zheng, Yucheng Tang, Isaac Yang, Michael Zephyr, Behrooz Hashemian, Sachidanand Alle, Mohammad Zalbagi Darestani, Charlie Budd, Marc Modat, Tom Vercauteren, Guotai Wang, Yiwen Li, Yipeng Hu, Yunguan Fu, Benjamin Gorman, Hans J. Johnson, Brad W. Genereaux, Barbaros S. Erdal, Vikash Gupta, Andres Diaz-Pinto, Andre Dourson, Lena Maier-Hein, Paul F. Jaeger, Michael Baumgartner, Jayashree Kalpathy-Cramer, Mona Flores, Justin S. Kirby, Lee A. D. Cooper, Holger R. Roth, Daguang Xu, David Bericat, Ralf Floca, S. Kevin Zhou, Haris Shuaib, Keyvan Farahani, Klaus H. Maier-Hein, Stephen R. Aylward, Prerna Dogra, Sébastien Ourselin, Andrew Feng:
MONAI: An open-source framework for deep learning in healthcare. CoRR abs/2211.02701 (2022) - [i15]Paul F. Jaeger, Carsten T. Lüth, Lukas Klein, Till J. Bungert:
A Call to Reflect on Evaluation Practices for Failure Detection in Image Classification. CoRR abs/2211.15259 (2022) - 2021
- [i14]Annika Reinke, Matthias Eisenmann, Minu Dietlinde Tizabi, Carole H. Sudre, Tim Rädsch, Michela Antonelli, Tal Arbel, Spyridon Bakas, M. Jorge Cardoso, Veronika Cheplygina, Keyvan Farahani, Ben Glocker, Doreen Heckmann-Nötzel, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Jens Kleesiek, Tahsin M. Kurç, Michal Kozubek, Bennett A. Landman, Geert Litjens, Klaus H. Maier-Hein, Bjoern H. Menze, Henning Müller, Jens Petersen, Mauricio Reyes, Nicola Rieke, Bram Stieltjes, Ronald M. Summers, Sotirios A. Tsaftaris, Bram van Ginneken, Annette Kopp-Schneider, Paul Jäger, Lena Maier-Hein:
Common Limitations of Image Processing Metrics: A Picture Story. CoRR abs/2104.05642 (2021) - [i13]Michael Baumgartner, Paul F. Jaeger, Fabian Isensee, Klaus H. Maier-Hein:
nnDetection: A Self-configuring Method for Medical Object Detection. CoRR abs/2106.00817 (2021) - [i12]Jens Petersen, Gregor Köhler, David Zimmerer, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
GP-ConvCNP: Better Generalization for Convolutional Conditional Neural Processes on Time Series Data. CoRR abs/2106.04967 (2021) - [i11]Jens Petersen, Fabian Isensee, Gregor Köhler, Paul F. Jäger, David Zimmerer, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Vollmuth, Klaus H. Maier-Hein:
Continuous-Time Deep Glioma Growth Models. CoRR abs/2106.12917 (2021) - 2020
- [i10]Fabian Isensee, Paul F. Jaeger, Peter M. Full, Philipp Vollmuth, Klaus H. Maier-Hein:
nnU-Net for Brain Tumor Segmentation. CoRR abs/2011.00848 (2020) - [i9]Peter M. Full, Fabian Isensee, Paul F. Jäger, Klaus H. Maier-Hein:
Studying Robustness of Semantic Segmentation under Domain Shift in cardiac MRI. CoRR abs/2011.07592 (2020) - 2019
- [i8]Fabian Isensee, Jens Petersen, Simon A. A. Kohl, Paul F. Jäger, Klaus H. Maier-Hein:
nnU-Net: Breaking the Spell on Successful Medical Image Segmentation. CoRR abs/1904.08128 (2019) - [i7]Jens Petersen, Paul F. Jäger, Fabian Isensee, Simon A. A. Kohl, Ulf Neuberger, Wolfgang Wick, Jürgen Debus, Sabine Heiland, Martin Bendszus, Philipp Kickingereder, Klaus H. Maier-Hein:
Deep Probabilistic Modeling of Glioma Growth. CoRR abs/1907.04064 (2019) - [i6]Gregor N. Ramien, Paul F. Jaeger, Simon A. A. Kohl, Klaus H. Maier-Hein:
Reg R-CNN: Lesion Detection and Grading under Noisy Labels. CoRR abs/1907.12915 (2019) - 2018
- [i5]Jennifer Kamphenkel, Paul F. Jaeger, Sebastian Bickelhaupt, Frederik Bernd Laun, Wolfgang Lederer, Heidi Daniel, Tristan Anselm Kuder, Stefan Delorme, Heinz-Peter Schlemmer, Franziska Koenig, Klaus H. Maier-Hein:
Domain Adaptation for Deviating Acquisition Protocols in CNN-based Lesion Classification on Diffusion-Weighted MR Images. CoRR abs/1807.06277 (2018) - [i4]Fabian Isensee, Jens Petersen, André Klein, David Zimmerer, Paul F. Jaeger, Simon Kohl, Jakob Wasserthal, Gregor Köhler, Tobias Norajitra, Sebastian J. Wirkert, Klaus H. Maier-Hein:
nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation. CoRR abs/1809.10486 (2018) - [i3]Paul F. Jaeger, Simon A. A. Kohl, Sebastian Bickelhaupt, Fabian Isensee, Tristan Anselm Kuder, Heinz-Peter Schlemmer, Klaus H. Maier-Hein:
Retina U-Net: Embarrassingly Simple Exploitation of Segmentation Supervision for Medical Object Detection. CoRR abs/1811.08661 (2018) - 2017
- [i2]Paul Jaeger, Sebastian Bickelhaupt, Frederik Bernd Laun, Wolfgang Lederer, Daniel Heidi, Tristan Anselm Kuder, Daniel Paech, David Bonekamp, Alexander Radbruch, Stefan Delorme, Heinz-Peter Schlemmer, Franziska Steudle, Klaus H. Maier-Hein:
Revealing Hidden Potentials of q-Space Imaging in Breast Cancer. CoRR abs/1702.08379 (2017) - [i1]Fabian Isensee, Paul Jaeger, Peter M. Full, Ivo Wolf, Sandy Engelhardt, Klaus H. Maier-Hein:
Automatic Cardiac Disease Assessment on cine-MRI via Time-Series Segmentation and Domain Specific Features. CoRR abs/1707.00587 (2017)
Coauthor Index
Simon Kohl
aka: Simon A. A. Kohl
aka: Simon A. A. Kohl
Klaus H. Maier-Hein
aka: Klaus Hermann Maier-Hein
aka: Klaus Hermann Maier-Hein
[j5] [j3] [j2] [j1] [c38] [c36] [c35] [c34] [c33] [c32] [c31] [c30] [c29] [c26] [c23] [c22] [c20] [c19] [c16] [c15] [c14] [c13] [c12] [c11] [c10] [c9] [c8] [c7] [c6] [c5] [c4] [c3] [c2] [c1] [i33] [i32] [i31] [i30] [i28] [i27] [i24] [i22] [i21] [i18] [i16] [i14] [i13] [i12] [i11] [i10] [i9] [i8] [i7] [i6] [i5] [i4] [i3] [i2] [i1]
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