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Shanshan Ren
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Books and Theses
- 2018
- [b1]Shanshan Ren:
Accelerating DNA Variant Calling Algorithms on High Performance Computing Systems. Delft University of Technology, The Netherlands, 2018
Journal Articles
- 2022
- [j9]Yushan Zhou, Xin Li
, Donghai Zheng
, Xiaolong Zhang, Yingzheng Wang, Shanshan Ren, Yanlong Guo
:
Decadal Changes in Glacier Area, Surface Elevation and Mass Balance for 2000-2020 in the Eastern Tanggula Mountains Using Optical Images and TanDEM-X Radar Data. Remote. Sens. 14(3): 506 (2022) - [j8]Shanshan Ren, Xin Li
, Yingzheng Wang, Donghai Zheng
, Decai Jiang, Yanyun Nian
, Yushan Zhou
:
Multitemporal Glacier Mass Balance and Area Changes in the Puruogangri Ice Field during 1975-2021 Based on Multisource Satellite Observations. Remote. Sens. 14(16): 4078 (2022) - 2021
- [j7]Yong Zhao, Shanshan Ren, Jürgen Kurths:
Synchronization of coupled memristive competitive BAM neural networks with different time scales. Neurocomputing 427: 110-117 (2021) - 2020
- [j6]Yong Zhao
, Shanshan Ren:
Novel Criteria of ISS Analysis for Delayed Memristive Simplified Cohen-Grossberg BAM Neural Networks. Complex. 2020: 3612394:1-3612394:14 (2020) - [j5]Shanshan Ren, Yong Zhao, Yonghui Xia:
Anti-synchronization of a Class Of Fuzzy Memristive Competitive Neural Networks with Different Time Scales. Neural Process. Lett. 52(1): 647-661 (2020) - 2019
- [j4]Nauman Ahmed, Jonathan Levy, Shanshan Ren, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars:
GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data. BMC Bioinform. 20(1): 520:1-520:20 (2019) - [j3]Nauman Ahmed, Jonathan Levy, Shanshan Ren, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars:
Correction to: GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data. BMC Bioinform. 20(1): 597:1-597:4 (2019) - [j2]Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars:
GPU accelerated sequence alignment with traceback for GATK HaplotypeCaller. BMC Genom. 20(S2) (2019) - 2009
- [j1]Karen M. Orcutt, Shanshan Ren, Kjell Gundersen:
Detecting Proteins in Highly Autofluorescent Cells Using Quantum Dot Antibody Conjugates. Sensors 9(9): 7540-7549 (2009)
Conference and Workshop Papers
- 2018
- [c5]Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars:
An Efficient GPU-Based de Bruijn Graph Construction Algorithm for Micro-Assembly. BIBE 2018: 67-72 - 2017
- [c4]Shanshan Ren, Koen Bertels, Zaid Al-Ars:
GPU-Accelerated GATK HaplotypeCaller with Load-Balanced Multi-Process Optimization. BIBE 2017: 497-502 - 2016
- [c3]Johan Peltenburg, Shanshan Ren, Zaid Al-Ars:
Maximizing systolic array efficiency to accelerate the PairHMM Forward Algorithm. BIBM 2016: 758-762 - [c2]Shanshan Ren, Koen Bertels, Zaid Al-Ars:
Exploration of alternative GPU implementations of the pair-HMMs forward algorithm. BIBM 2016: 902-909 - 2015
- [c1]Shanshan Ren, Vlad Mihai Sima
, Zaid Al-Ars:
FPGA acceleration of the pair-HMMs forward algorithm for DNA sequence analysis. BIBM 2015: 1465-1470
Coauthor Index
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