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Alisdair R. Fernie

Alisdair R. Sterling

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affiliation: Max Planck Institute for Informatics, Saarbücken, Germany

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Journal Articles

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2021
[j9]
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  - journals/patterns/OmidbakhshfardS21
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  - https://dblp.org/rec/journals/patterns/OmidbakhshfardS21
Mohammad Amin Omidbakhshfard, Ewelina M. Sokolowska, Valerio Di Vittori, Leonardo Perez de Souza, Anastasiya Kuhalskaya, Yariv Brotman, Saleh Alseekh, Alisdair R. Fernie, Aleksandra Skirycz:
Multi-omics analysis of early leaf development in Arabidopsis thaliana. Patterns 2(4): 100235 (2021)
2016
[j8]
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  - journals/bioinformatics/Sajitz-Hermstein16
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  - https://dblp.org/rec/journals/bioinformatics/Sajitz-Hermstein16
Max Sajitz-Hermstein, Nadine Töpfer, Sabrina Kleessen, Alisdair R. Fernie, Zoran Nikoloski:
iReMet-flux: constraint-based approach for integrating relative metabolite levels into a stoichiometric metabolic models. Bioinform. 32(17): 755-762 (2016)
2014
[j7]
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  - journals/ploscb/TopferSFN14
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Nadine Töpfer, Federico Scossa, Alisdair R. Fernie, Zoran Nikoloski:
Variability of Metabolite Levels Is Linked to Differential Metabolic Pathways in Arabidopsis's Responses to Abiotic Stresses. PLoS Comput. Biol. 10(6) (2014)
2012
[j6]
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  - journals/nar/LohseBNFLSU12
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Marc Lohse, Anthony M. Bolger, Axel Nagel, Alisdair R. Fernie, John E. Lunn, Mark Stitt, Björn Usadel:
RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res. 40(Web-Server-Issue): 622-627 (2012)
2007
[j5]
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  - journals/bioinformatics/SteuerNFGBS07
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  - https://dblp.org/rec/journals/bioinformatics/SteuerNFGBS07
Ralf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig:
From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinform. 23(11): 1378-1385 (2007)
2006
[j4]
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  - journals/bmcbi/UsadelNSGBRSKHPFS06
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Björn Usadel, Axel Nagel, Dirk Steinhauser, Yves Gibon, Oliver E. Bläsing, Henning Redestig, Nese Sreenivasulu, Leonard Krall, Matthew A. Hannah, Fabien Poree, Alisdair R. Fernie, Mark Stitt:
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinform. 7: 535 (2006)
[j3]
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  - journals/jib/SteinfathRHSFS06
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Matthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig:
Metabolite profiles as a reflection of physiological status -- a methodological validation. J. Integr. Bioinform. 3(2) (2006)
2005
[j2]
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  - journals/bioinformatics/KopkaSKBUBDWGSWFS05
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Joachim Kopka, Nicolas Schauer, Stephan Krueger, Claudia Birkemeyer, Björn Usadel, Eveline Bergmüller, Peter Dörmann, Wolfram Weckwerth, Yves Gibon, Mark Stitt, Lothar Willmitzer, Alisdair R. Fernie, Dirk Steinhauser:
GMD@CSB.DB: the Golm Metabolome Database. Bioinform. 21(8): 1635-1638 (2005)
2004
[j1]
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  - journals/bioinformatics/ScholzGSFS04
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Matthias Scholz, S. Gatzek, Alisdair R. Sterling, Oliver Fiehn, Joachim Selbig:
Metabolite fingerprinting: detecting biological features by independent component analysis. Bioinform. 20(15): 2447-2454 (2004)

Conference and Workshop Papers

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2007
[c1]
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  - conf/gcb/WillmitzerCFGHRS07
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Lothar Willmitzer, Camila Caldana, Alisdair R. Fernie, Patrick Giavalisco, Matthew A. Hannah, Henning Redestig, Dirk Steinhauser:
Integrative Analysis of Transcriptome and Metabolome Data. German Conference on Bioinformatics 2007: 198-199

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