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Irina Kufareva
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2020 – today
- 2023
- [j9]Willow Carretero Chavez, Marcus Krantz, Edda Klipp, Irina Kufareva:
kboolnet: a toolkit for the verification, validation, and visualization of reaction-contingency (rxncon) models. BMC Bioinform. 24(1): 246 (2023) - 2020
- [j8]George Nicola, Irina Kufareva, Andrey V. Ilatovskiy, Ruben Abagyan:
Druggable exosites of the human kino-pocketome. J. Comput. Aided Mol. Des. 34(3): 219-230 (2020)
2010 – 2019
- 2015
- [j7]Jarmila Husby, Giovanni Bottegoni, Irina Kufareva, Ruben Abagyan, Andrea Cavalli:
Structure-Based Predictions of Activity Cliffs. J. Chem. Inf. Model. 55(5): 1062-1076 (2015) - 2014
- [j6]Mari Gabrielsen, Rafal Kurczab, Agata Siwek, Malgorzata Wolak, Aina Westrheim Ravna, Kurt Kristiansen, Irina Kufareva, Ruben Abagyan, Gabriel Nowak, Zdzislaw Chilmonczyk, Ingebrigt Sylte, Andrzej J. Bojarski:
Identification of Novel Serotonin Transporter Compounds by Virtual Screening. J. Chem. Inf. Model. 54(3): 933-943 (2014) - 2012
- [j5]Irina Kufareva, Andrey V. Ilatovskiy, Ruben Abagyan:
Pocketome: an encyclopedia of small-molecule binding sites in 4D. Nucleic Acids Res. 40(Database-Issue): 535-540 (2012) - 2010
- [j4]A. V. Grigoryan, Irina Kufareva, Maxim Totrov, Ruben Abagyan:
Spatial chemical distance based on atomic property fields. J. Comput. Aided Mol. Des. 24(3): 173-182 (2010) - [j3]So-Jung Park, Irina Kufareva, Ruben Abagyan:
Improved docking, screening and selectivity prediction for small molecule nuclear receptor modulators using conformational ensembles. J. Comput. Aided Mol. Des. 24(5): 459-471 (2010)
2000 – 2009
- 2008
- [j2]Giovanni Bottegoni, Irina Kufareva, Maxim Totrov, Ruben Abagyan:
A new method for ligand docking to flexible receptors by dual alanine scanning and refinement (SCARE). J. Comput. Aided Mol. Des. 22(5): 311-325 (2008) - [j1]Hui Sun Lee, Jiwon Choi, Irina Kufareva, Ruben Abagyan, Anton V. Filikov, Young Yang, Sukjoon Yoon:
Optimization of High Throughput Virtual Screening by Combining Shape-Matching and Docking Methods. J. Chem. Inf. Model. 48(3): 489-497 (2008)
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