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Manuel A. Rivas
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2020 – today
- 2024
- [i4]Thomas Le Menestrel, Erin Craig, Robert Tibshirani, Trevor Hastie, Manuel A. Rivas:
Using Pre-training and Interaction Modeling for ancestry-specific disease prediction in UK Biobank. CoRR abs/2404.17626 (2024) - [i3]Thomas Le Menestrel, Manuel A. Rivas:
Smiles2Dock: an open large-scale multi-task dataset for ML-based molecular docking. CoRR abs/2406.05738 (2024) - 2021
- [j7]Ruilin Li, Christopher Chang, Yosuke Tanigawa, Balasubramanian Narasimhan, Trevor Hastie, Robert Tibshirani, Manuel A. Rivas:
Fast numerical optimization for genome sequencing data in population biobanks. Bioinform. 37(22): 4148-4155 (2021) - [j6]Ruilin Li, Yosuke Tanigawa, Johanne M. Justesen, Jonathan Taylor, Trevor Hastie, Robert Tibshirani, Manuel A. Rivas:
Survival analysis on rare events using group-regularized multi-response Cox regression. Bioinform. 37(23): 4437-4443 (2021) - [c1]Yongchan Kwon, Manuel A. Rivas, James Zou:
Efficient Computation and Analysis of Distributional Shapley Values. AISTATS 2021: 793-801 - 2020
- [i2]Yongchan Kwon, Manuel A. Rivas, James Zou:
Efficient computation and analysis of distributional Shapley values. CoRR abs/2007.01357 (2020)
2010 – 2019
- 2019
- [j5]Gregory McInnes, Yosuke Tanigawa, Chris DeBoever, Adam Lavertu, Julia Eve Olivieri, Matthew Aguirre, Manuel A. Rivas:
Global Biobank Engine: enabling genotype-phenotype browsing for biobank summary statistics. Bioinform. 35(14): 2495-2497 (2019) - 2018
- [j4]Allen Nie, Ashley Zehnder, Rodney López Page, Yuhui Zhang, Arturo López Pineda, Manuel A. Rivas, Carlos D. Bustamante, James Zou:
DeepTag: inferring diagnoses from veterinary clinical notes. npj Digit. Medicine 1 (2018) - [i1]Allen Nie, Ashley Zehnder, Rodney López Page, Arturo L. Pineda, Manuel A. Rivas, Carlos D. Bustamante, James Zou:
DeepTag: inferring all-cause diagnoses from clinical notes in under-resourced medical domain. CoRR abs/1806.10722 (2018) - 2017
- [j3]Matti Pirinen, Christian Benner, Pekka Marttinen, Marjo-Riitta Järvelin, Manuel A. Rivas, Samuli Ripatti:
biMM: efficient estimation of genetic variances and covariances for cohorts with high-dimensional phenotype measurements. Bioinform. 33(15): 2405-2407 (2017) - 2015
- [j2]Matti Pirinen, Tuuli Lappalainen, Noah A. Zaitlen, Emmanouil T. Dermitzakis, Peter Donnelly, Mark I. McCarthy, Manuel A. Rivas:
Assessing allele-specific expression across multiple tissues from RNA-seq read data. Bioinform. 31(15): 2497-2504 (2015) - 2013
- [j1]Manuel A. Rivas, Matti Pirinen, Matthew J. Neville, Kyle J. Gaulton, Loukas Moutsianas, Cecilia M. Lindgren, Fredrik Karpe, Mark I. McCarthy, Peter Donnelly:
Assessing association between protein truncating variants and quantitative traits. Bioinform. 29(19): 2419-2426 (2013)
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