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2020 – today
- 2024
[j2]Philippe Weitz
, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen:
The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue. Medical Image Anal. 97: 103257 (2024)- [c22]Christof A. Bertram, Christian Marzahl, Alexander Bartel, Jason Stayt, Federico Bonsembiante, Janet Beeler-Marfisi, Ann K. Barton, Ginevra Brocca, Maria E. Gelain, Agnes C. Gläsel, Kelly du Preez, Kristina Weiler, Christiane Weissenbacher-Lang, Katharina Breininger, Marc Aubreville, Andreas K. Maier, Robert Klopfleisch, Jenny Hill:
Abstract: Cytologic Scoring of Equine Exercise-induced Pulmonary Hemorrhage - Performance of Human Experts and a Deep Learning. Bildverarbeitung für die Medizin 2024: 10 - [i18]Jonathan Ganz, Christian Marzahl, Jonas Ammeling, Barbara Richter, Chloé Puget, Daniela Denk, Elena A. Demeter, Flaviu A. Tabaran, Gabriel Wasinger, Karoline Lipnik, Marco Tecilla, Matthew J. Valentine, Michael J. Dark, Niklas Abele, Pompei Bolfa, Ramona Erber, Robert Klopfleisch, Sophie Merz, Taryn A. Donovan, Samir Jabari, Christof A. Bertram, Katharina Breininger, Marc Aubreville:
On the Value of PHH3 for Mitotic Figure Detection on H&E-stained Images. CoRR abs/2406.19899 (2024) - 2023
- [j1]Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Adam Shephard, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Ramona Erber, Andrea Klang, Karoline Lipnik, Pompei Bolfa, Michael J. Dark, Gabriel Wasinger, Mitko Veta, Katharina Breininger:
Mitosis domain generalization in histopathology images - The MIDOG challenge. Medical Image Anal. 84: 102699 (2023) - [c21]Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Mitko Veta, Katharina Breininger:
Abstract: the MIDOG Challenge 2021 - Mitosis Domain Generalization in Histopathology Images. Bildverarbeitung für die Medizin 2023: 115 - [c20]Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Chloé Puget, Laura Diehl, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville:
Abstract: Pan-tumor CAnine CuTaneous Cancer Histology (CATCH) Dataset. Bildverarbeitung für die Medizin 2023: 205 - [i17]Philippe Weitz, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen:
The ACROBAT 2022 Challenge: Automatic Registration Of Breast Cancer Tissue. CoRR abs/2305.18033 (2023) - 2022
- [b1]Christian Marzahl:
Deep Learning-based Cell Detection in Microscopy Images. University of Erlangen-Nuremberg, Germany, 2022 - [c19]Sonja Kunzmann, Christian Marzahl, Felix Denzinger, Christof Bertram, Robert Klopfleisch, Katharina Breininger, Vincent Christlein, Andreas K. Maier:
First Steps on Gamification of Lung Fluid Cells Annotations in the Flower Domain. Bildverarbeitung für die Medizin 2022: 223-228 - [c18]Mathias Öttl, Jana Mönius, Christian Marzahl, Matthias Rübner, Carol I. Geppert, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Katharina Breininger:
Superpixel Pre-segmentation of HER2 Slides for Efficient Annotation. Bildverarbeitung für die Medizin 2022: 254-259 - [i16]Mathias Öttl, Jana Mönius, Christian Marzahl, Matthias Rübner, Carol I. Geppert, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Katharina Breininger:
Superpixel Pre-Segmentation of HER2 Slides for Efficient Annotation. CoRR abs/2201.07572 (2022) - [i15]Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville:
Pan-Tumor CAnine cuTaneous Cancer Histology (CATCH) Dataset. CoRR abs/2201.11446 (2022) - [i14]Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie D. ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Nasir M. Rajpoot, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Mitko Veta, Katharina Breininger:
Mitosis domain generalization in histopathology images - The MIDOG challenge. CoRR abs/2204.03742 (2022) - 2021
- [c17]Christian Marzahl, Marc Aubreville, Christof A. Bertram, Jason Stayt, Anne-Katherine Jasensky, Florian Bartenschlager, Marco Fragoso, Ann K. Barton, Svenja Elsemann, Samir Jabari, Jens Krauth, Prathmesh Madhu, Jörn Voigt, Jenny Hill, Robert Klopfleisch, Andreas Maier:
Abstract: Deep Learning-based Quantification of Pulmonary Hemosiderophages in Cytology Slides. Bildverarbeitung für die Medizin 2021: 48 - [c16]Christof A. Bertram, Taryn A. Donovan, Marco Tecilla, Florian Bartenschlager, Marco Fragoso, Frauke Wilm, Christian Marzahl, Katharina Breininger, Andreas Maier, Robert Klopfleisch, Marc Aubreville:
Dataset on Bi- and Multi-nucleated Tumor Cells in Canine Cutaneous Mast Cell Tumors. Bildverarbeitung für die Medizin 2021: 134-139 - [c15]Christian Marzahl, Christof A. Bertram, Frauke Wilm, Jörn Voigt, Ann K. Barton, Robert Klopfleisch, Katharina Breininger, Andreas Maier, Marc Aubreville:
Cell Detection for Asthma on Partially Annotated Whole Slide Images - Learning to be EXACT. Bildverarbeitung für die Medizin 2021: 147-152 - [c14]Marc Aubreville, Christof A. Bertram, Taryn A. Donovan, Christian Marzahl, Andreas Maier, Robert Klopfleisch:
Abstract: A Completely Annotated Whole Slide Image Dataset of Canine Breast Cancer to Aid Human Breast Cancer Research. Bildverarbeitung für die Medizin 2021: 198 - [c13]Frauke Wilm, Christof A. Bertram, Christian Marzahl, Alexander Bartel, Taryn A. Donovan, Charles-Antoine Assenmacher, Kathrin Becker, Mark Bennett, Sarah Corner, Brieuc Cossic, Daniela Denk, Martina Dettwiler, Beatriz Garcia Gonzalez, Corinne Gurtner, Annabelle Heier, Annika Lehmbecker, Sophie Merz, Stephanie Plog, Anja Schmidt, Franziska Sebastian, Rebecca C. Smedley, Marco Tecilla, Tuddow Thaiwong, Katharina Breininger, Matti Kiupel, Andreas Maier, Robert Klopfleisch, Marc Aubreville:
Influence of Inter-Annotator Variability on Automatic Mitotic Figure Assessment. Bildverarbeitung für die Medizin 2021: 241-246 - [c12]Marc Aubreville, Christof A. Bertram, Christian Marzahl, Corinne Gurtner, Martina Dettwiler, Anja Schmidt, Florian Bartenschlager, Sophie Merz, Marco Fragoso, Olivia Kershaw, Robert Klopfleisch, Andreas Maier:
Abstract: Deep Learning Algorithms Out-perform Veterinary Pathologists in Detecting the Mitotically Most Active Tumor Region. Bildverarbeitung für die Medizin 2021: 260 - [c11]Christian Marzahl, Christof A. Bertram, Marc Aubreville, Anne Petrick, Kristina Weiler, Agnes C. Gläsel, Marco Fragoso, Sophie Merz, Florian Bartenschlager, Judith Hoppe, Alina Langenhagen, Anne-Katherine Jasensky, Jörn Voigt, Robert Klopfleisch, Andreas Maier:
Abstract: Are Fast Labeling Methods Reliable? - A Case Study of Computer-aided Expert Annotations on Microscopy Slides. Bildverarbeitung für die Medizin 2021: 296 - [c10]Christian Marzahl, Frauke Wilm, Franz F. Dressler, Lars Tharun, Sven Perner, Christof A. Bertram, Christine Kröger, Jörn Voigt, Robert Klopfleisch, Andreas K. Maier, Marc Aubreville, Katharina Breininger:
Robust Quad-Tree based Registration on Whole Slide Images. COMPAY@MICCAI 2021: 181-190 - [c9]Luisa Theelke, Frauke Wilm, Christian Marzahl, Christof A. Bertram, Robert Klopfleisch, Andreas Maier, Marc Aubreville, Katharina Breininger:
Iterative Cross-Scanner Registration for Whole Slide Images. ICCVW 2021: 582-590 - [c8]Frauke Wilm, Christian Marzahl, Katharina Breininger, Marc Aubreville:
Domain Adversarial RetinaNet as a Reference Algorithm for the MItosis DOmain Generalization Challenge. MIDOG/MOOD/Learn2Reg@MICCAI 2021: 5-13 - [i13]Christof A. Bertram, Taryn A. Donovan, Marco Tecilla, Florian Bartenschlager, Marco Fragoso, Frauke Wilm, Christian Marzahl, Katharina Breininger, Andreas Maier, Robert Klopfleisch, Marc Aubreville:
Dataset on Bi- and Multi-Nucleated Tumor Cells in Canine Cutaneous Mast Cell Tumors. CoRR abs/2101.01445 (2021) - [i12]Christian Marzahl, Christof A. Bertram, Frauke Wilm, Jörn Voigt, Ann K. Barton, Robert Klopfleisch, Katharina Breininger, Andreas Maier, Marc Aubreville:
Learning to be EXACT, Cell Detection for Asthma on Partially Annotated Whole Slide Images. CoRR abs/2101.04943 (2021) - [i11]Christian Marzahl, Jenny Hill, Jason Stayt, Dorothee Bienzle, Lutz Welker, Frauke Wilm, Jörn Voigt, Marc Aubreville, Andreas K. Maier, Robert Klopfleisch, Katharina Breininger, Christof A. Bertram:
Inter-Species Cell Detection: Datasets on pulmonary hemosiderophages in equine, human and feline specimens. CoRR abs/2108.08529 (2021) - [i10]Sonja Kunzmann, Christian Marzahl, Felix Denzinger, Christof A. Bertram, Robert Klopfleisch, Katharina Breininger, Vincent Christlein, Andreas K. Maier:
First steps on Gamification of Lung Fluid Cells Annotations in the Flower Domain. CoRR abs/2111.03663 (2021) - 2020
- [c7]Marc Aubreville, Christof A. Bertram, Samir Jabari, Christian Marzahl, Robert Klopfleisch, Andreas K. Maier:
Inter-Species, Inter-Tissue Domain Adaptation for Mitotic Figure Assessment. Bildverarbeitung für die Medizin 2020: 1-7 - [c6]Christian Marzahl, Marc Aubreville, Christof A. Bertram, Stefan Gerlach, Jennifer Maier, Jörn Voigt, Jenny Hill, Robert Klopfleisch, Andreas K. Maier:
Is Crowd-Algorithm Collaboration an Advanced Alternative to Crowd-Sourcing on Cytology Slides? Bildverarbeitung für die Medizin 2020: 26-31 - [c5]Christof A. Bertram, Marc Aubreville, Christian Marzahl, Andreas K. Maier, Robert Klopfleisch:
Abstract: How Big is Big Enough? Bildverarbeitung für die Medizin 2020: 293 - [c4]Christian Marzahl, Christof A. Bertram, Marc Aubreville, Anne Petrick, Kristina Weiler, Agnes C. Gläsel, Marco Fragoso, Sophie Merz, Florian Bartenschlager, Judith Hoppe, Alina Langenhagen, Anne-Katherine Jasensky, Jörn Voigt, Robert Klopfleisch, Andreas Maier:
Are Fast Labeling Methods Reliable? A Case Study of Computer-Aided Expert Annotations on Microscopy Slides. MICCAI (1) 2020: 24-32 - [c3]Christof A. Bertram, Mitko Veta, Christian Marzahl, Nikolas Stathonikos, Andreas K. Maier, Robert Klopfleisch, Marc Aubreville:
Are Pathologist-Defined Labels Reproducible? Comparison of the TUPAC16 Mitotic Figure Dataset with an Alternative Set of Labels. iMIMIC/MIL3ID/LABELS@MICCAI 2020: 204-213 - [i9]Christian Marzahl, Christof A. Bertram, Marc Aubreville, Anne Petrick, Kristina Weiler, Agnes C. Gläsel, Marco Fragoso, Sophie Merz, Florian Bartenschlager, Judith Hoppe, Alina Langenhagen, Anne-Katherine Jasensky, Jörn Voigt, Robert Klopfleisch, Andreas K. Maier:
Are fast labeling methods reliable? A case study of computer-aided expert annotations on microscopy slides. CoRR abs/2004.05838 (2020) - [i8]Christian Marzahl, Marc Aubreville, Christof A. Bertram, Jennifer Maier, Christian Bergler, Christine Kröger, Jörn Voigt, Robert Klopfleisch, Andreas K. Maier:
EXACT: A collaboration toolset for algorithm-aided annotation of almost everything. CoRR abs/2004.14595 (2020) - [i7]Christof A. Bertram, Mitko Veta, Christian Marzahl, Nikolas Stathonikos, Andreas K. Maier, Robert Klopfleisch, Marc Aubreville:
Are pathologist-defined labels reproducible? Comparison of the TUPAC16 mitotic figure dataset with an alternative set of labels. CoRR abs/2007.05351 (2020) - [i6]Marc Aubreville, Christof A. Bertram, Taryn A. Donovan, Christian Marzahl, Andreas Maier, Robert Klopfleisch:
Dogs as Model for Human Breast Cancer: A Completely Annotated Whole Slide Image Dataset. CoRR abs/2008.10244 (2020) - [i5]Frauke Wilm, Christof A. Bertram, Christian Marzahl, Alexander Bartel, Taryn A. Donovan, Charles-Antoine Assenmacher, Kathrin Becker, Mark Bennett, Sarah Corner, Brieuc Cossic, Daniela Denk, Martina Dettwiler, Beatriz Garcia Gonzalez, Corinne Gurtner, Annika Lehmbecker, Sophie Merz, Stephanie Plog, Anja Schmidt, Rebecca C. Smedley, Marco Tecilla, Tuddow Thaiwong, Katharina Breininger, Matti Kiupel, Andreas Maier, Robert Klopfleisch, Marc Aubreville:
How Many Annotators Do We Need? - A Study on the Influence of Inter-Observer Variability on the Reliability of Automatic Mitotic Figure Assessment. CoRR abs/2012.02495 (2020)
2010 – 2019
- 2019
- [c2]Jens Krauth, Stefan Gerlach, Christian Marzahl, Jörn Voigt, Heinz Handels:
Synthetic Training with Generative Adversarial Networks for Segmentation of Microscopies. Bildverarbeitung für die Medizin 2019: 37-42 - [i4]Marc Aubreville, Christof A. Bertram, Christian Marzahl, Corinne Gurtner, Martina Dettwiler, Anja Schmidt, Florian Bartenschlager, Sophie Merz, Marco Fragoso, Olivia Kershaw, Robert Klopfleisch, Andreas Maier:
Field of Interest Prediction for Computer-Aided Mitotic Count. CoRR abs/1902.05414 (2019) - [i3]Christian Marzahl, Marc Aubreville, Christof A. Bertram, Jason Stayt, Anne-Katherine Jasensky, Florian Bartenschlager, Marco Fragoso-Garcia, Ann K. Barton, Svenja Elsemann, Samir Jabari, Jens Krauth, Prathmesh Madhu, Jörn Voigt, Jenny Hill, Robert Klopfleisch, Andreas K. Maier:
Deep Learning-Based Quantification of Pulmonary Hemosiderophages in Cytology Slides. CoRR abs/1908.04767 (2019) - [i2]Marc Aubreville, Christof A. Bertram, Samir Jabari, Christian Marzahl, Robert Klopfleisch, Andreas K. Maier:
Learning New Tricks from Old Dogs - Inter-Species, Inter-Tissue Domain Adaptation for Mitotic Figure Assessment. CoRR abs/1911.10873 (2019) - [i1]Christian Marzahl, Marc Aubreville, Christof A. Bertram, Stefan Gerlach, Jennifer Maier, Jörn Voigt, Jenny Hill, Robert Klopfleisch, Andreas K. Maier:
Fooling the Crowd with Deep Learning-based Methods. CoRR abs/1912.00142 (2019) - 2012
- [c1]Henriette Rau, Jacob Grieger, Christian Marzahl, Peter Penndorf, Martin Staemmler:
Unobtrusive Fall Detection and Prevention: Extending From a Prototype Test to a Pilot Trial. GI-Jahrestagung 2012: 1456-1473
Coauthor Index
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