
Maxwell Lewis Neal
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2010 – 2019
- 2019
- [j9]Maxwell Lewis Neal
, Matthias König
, David P. Nickerson
, Goksel Misirli
, Reza Kalbasi, Andreas Dräger
, Koray Atalag, Vijayalakshmi Chelliah, Michael T. Cooling
, Daniel L. Cook, Sharon M. Crook
, Miguel de Alba, Samuel H. Friedman
, Alan Garny, John H. Gennari
, Padraig Gleeson
, Martin Golebiewski, Michael Hucka
, Nick S. Juty, Chris J. Myers, Brett G. Olivier
, Herbert M. Sauro, Martin Scharm, Jacky L. Snoep
, Vasundra Touré, Anil Wipat
, Olaf Wolkenhauer
, Dagmar Waltemath
:
Harmonizing semantic annotations for computational models in biology. Briefings Bioinform. 20(2): 540-550 (2019) - [j8]Maxwell Lewis Neal
, Christopher T. Thompson, Karam G. Kim
, Ryan C. James, Daniel L. Cook, Brian E. Carlson
, John H. Gennari
:
SemGen: a tool for semantics-based annotation and composition of biosimulation models. Bioinform. 35(9): 1600-1602 (2019) - [j7]Dewan M. Sarwar
, Reza Kalbasi, John H. Gennari
, Brian E. Carlson, Maxwell Lewis Neal
, Bernard de Bono, Koray Atalag, Peter J. Hunter, David P. Nickerson
:
Model annotation and discovery with the Physiome Model Repository. BMC Bioinform. 20(1): 457:1-457:10 (2019) - 2017
- [c9]Daniel L. Cook, John H. Gennari, Maxwell Lewis Neal:
Extending the Ontology of Physics for Biology with Thermodynamics. ICBO 2017 - 2016
- [c8]Maxwell Lewis Neal, John H. Gennari, Daniel L. Cook:
Qualitative Causal Analyses of Biosimulation Models. ICBO/BioCreative 2016 - 2014
- [j6]Maxwell Lewis Neal, Michal Galdzicki
, J. T. Gallimore, Herbert M. Sauro:
A C library for retrieving specific reactions from the BioModels database. Bioinform. 30(1): 129-130 (2014) - [j5]Maxwell Lewis Neal, Michael T. Cooling
, Lucian P. Smith
, Christopher T. Thompson, Herbert M. Sauro, Brian E. Carlson, Daniel L. Cook, John H. Gennari
:
A Reappraisal of How to Build Modular, Reusable Models of Biological Systems. PLoS Comput. Biol. 10(10) (2014) - 2013
- [j4]Daniel L. Cook, Maxwell Lewis Neal
, Fred L. Bookstein, John H. Gennari
:
Ontology of physics for biology: representing physical dependencies as a basis for biological processes. J. Biomed. Semant. 4: 41 (2013) - [j3]Daniel L. Cook, Maxwell Lewis Neal, Robert Hoehndorf, Georgios V. Gkoutos, John H. Gennari:
Representing physiological processes and their participants with PhysioMaps. J. Biomed. Semant. 4(S-1): S2 (2013) - [c7]Nazanin Tabesh-Saleki, Brian E. Carlson, Christopher T. Thompson, Maxwell Lewis Neal, Daniel L. Cook, Mary Shimoyama:
Innovative Use of Ontologies: Association of Physiological Pathways to Corresponding Computational Models and Disparate Data Types. AMIA 2013 - [c6]Maxwell Lewis Neal, Daniel L. Cook, John H. Gennari:
An OWL knowledge base for classifying and querying collections of physiological models: A prototype human physiome. ICBO 2013: 16-21 - 2011
- [j2]John H. Gennari
, Maxwell Lewis Neal
, Michal Galdzicki
, Daniel L. Cook:
Multiple ontologies in action: Composite annotations for biosimulation models. J. Biomed. Informatics 44(1): 146-154 (2011) - [c5]Daniel L. Cook, Michal Galdzicki, Maxwell Lewis Neal, José L. V. Mejino Jr., John H. Gennari:
HeartCyc: A Cardiac Cycle Process Ontology Based in the Ontology of Physics for Biology. ICBO 2011 - 2010
- [j1]Maxwell Lewis Neal
, Roy Kerckhoffs:
Current progress in patient-specific modeling. Briefings Bioinform. 11(1): 111-126 (2010)
2000 – 2009
- 2009
- [c4]Maxwell Lewis Neal, John H. Gennari, Theo Arts, Daniel L. Cook:
Advances in Semantic Representation for Multiscale Biosimulation: A Case Study in Merging Models. Pacific Symposium on Biocomputing 2009: 304-315 - 2008
- [c3]Daniel L. Cook, José L. V. Mejino Jr., Maxwell Lewis Neal, John H. Gennari:
Bridging Biological Ontologies and Biosimulation: The Ontology of Physics for Biology. AMIA 2008 - [c2]John H. Gennari, Maxwell Lewis Neal, Brian E. Carlson, Daniel L. Cook:
Integration of Multi-Scale Biosimulation Models via Light-Weight Semantics. Pacific Symposium on Biocomputing 2008: 414-425 - 2006
- [c1]Daniel L. Rubin, David Grossman, Maxwell Lewis Neal, Daniel L. Cook, James B. Bassingthwaighte, Mark A. Musen:
Ontology-Based Representation of Simulation Models of Physiology. AMIA 2006
Coauthor Index

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