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ORCIDRobert Clarke
- > Home > Persons > Robert Clarke
Publications
- 2014
[j30]Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins
, Li Chen, Yue Joseph Wang, Robert Clarke:
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic. Bioinform. 30(15): 2242 (2014)- 2013
- [j23]Xi Chen, Jianhua Xuan, Chen Wang, Ayesha N. Shajahan, Rebecca B. Riggins, Robert Clarke:
Reconstruction of Transcriptional Regulatory Networks by Stability-Based Network Component Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. 10(6): 1347-1358 (2013) - 2012
- [j22]Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Joseph Wang, Robert Clarke:
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic. Bioinform. 28(15): 1990-1997 (2012) - [c24]Xi Chen, Chen Wang, Ayesha N. Shajahan, Rebecca B. Riggins, Robert Clarke, Jianhua Xuan:
Reconstruction of Transcription Regulatory Networks by Stability-Based Network Component Analysis. ISBRA 2012: 36-47 - 2011
- [j18]Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggins, Huai Li, Eric P. Hoffman, Robert Clarke, Yue Joseph Wang:
Motif-guided sparse decomposition of gene expression data for regulatory module identification. BMC Bioinform. 12: 82 (2011) - [j17]Li Chen, Jianhua Xuan, Rebecca B. Riggins, Robert Clarke, Yue Joseph Wang:
Identifying cancer biomarkers by network-constrained support vector machines. BMC Syst. Biol. 5: 161 (2011) - 2010
- [j16]Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke:
Multilevel support vector regression analysis to identify condition-specific regulatory networks. Bioinform. 26(11): 1416-1422 (2010) - [c21]Jinghua Gu, Jianhua Xuan, Yue Joseph Wang, Rebecca B. Riggins, Robert Clarke:
Identification of Transcriptional Regulatory Networks by Learning the Marginal Function of Outlier Sum Statistic. ICMLA 2010: 281-286 - 2009
- [j13]Bai Zhang, Huai Li, Rebecca B. Riggins, Ming Zhan, Jianhua Xuan, Zhen Zhang, Eric P. Hoffman, Robert Clarke, Yue Joseph Wang:
Differential dependency network analysis to identify condition-specific topological changes in biological networks. Bioinform. 25(4): 526-532 (2009) - [j12]Li Chen, Jianhua Xuan, Yue Joseph Wang, Eric P. Hoffman, Rebecca B. Riggins, Robert Clarke:
Identification of condition-specific regulatory modules through multi-level motif and mRNA expression analysis. Int. J. Comput. Biol. Drug Des. 2(1): 1-20 (2009) - [c20]Ting Gong, Jianhua Jason Xuan, Rebecca B. Riggins, Robert Clarke:
A Systems Biology Approach to Identify Affected Regulatory and Signaling Circuits in Protein Interaction Networks. IJCBS 2009: 297-300 - 2008
- [c16]Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke:
Identification of Condition-specific Regulatory Modules by Multi-level Motif and mRNA Expression Analysis. BIOCOMP 2008: 23-28 - [c15]Ting Gong, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke:
Exploring Transcriptional Modules Through Integrative Gene Clustering Guided by Transcription Factor Binding Information. BIOCOMP 2008: 191-197 - [c13]Li Chen, Jianhua Xuan, Yue Joseph Wang, Rebecca B. Riggins, Robert Clarke:
Network-Constrained Support Vector Machine for Classification. ICMLA 2008: 60-65 - [c11]Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke:
Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information. ISBRA 2008: 244-255
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