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ORCIDSeiya Imoto
- > Home > Persons > Seiya Imoto
Publications
- 2020
[j57]Takanori Hasegawa, Shuto Hayashi
, Eigo Shimizu, Shinichi Mizuno, Atsushi Niida, Rui Yamaguchi, Satoru Miyano, Hidewaki Nakagawa, Seiya Imoto:
Neoantimon: a multifunctional R package for identification of tumor-specific neoantigens. Bioinform. 36(18): 4813-4816 (2020)- [j55]Takanori Hasegawa, Rui Yamaguchi, Atsushi Niida, Satoru Miyano, Seiya Imoto:
Ensemble smoothers for inference of hidden states and parameters in combinatorial regulatory model. J. Frankl. Inst. 357(5): 2916-2933 (2020) - 2017
- [j49]Heewon Park, Atsushi Niida, Seiya Imoto, Satoru Miyano:
Interaction-Based Feature Selection for Uncovering Cancer Driver Genes Through Copy Number-Driven Expression Level. J. Comput. Biol. 24(2): 138-152 (2017) - 2016
- [j47]Takanori Hasegawa, Atsushi Niida, Tomoya Mori, Teppei Shimamura, Rui Yamaguchi, Satoru Miyano, Tatsuya Akutsu, Seiya Imoto:
A likelihood-free filtering method via approximate Bayesian computation in evaluating biological simulation models. Comput. Stat. Data Anal. 94: 63-74 (2016) - [j46]Emi Ayada, Takanori Hasegawa, Atsushi Niida, Satoru Miyano, Seiya Imoto:
Binary contingency table method for analysing gene mutation in cancer genome. Int. J. Bioinform. Res. Appl. 12(3): 211-226 (2016) - 2015
- [j41]Heewon Park, Atsushi Niida, Satoru Miyano, Seiya Imoto:
Sparse Overlapping Group Lasso for Integrative Multi-Omics Analysis. J. Comput. Biol. 22(2): 73-84 (2015) - [c44]Emi Ayada, Atsushi Niida, Takanori Hasegawa, Satoru Miyano, Seiya Imoto:
Binary Contingency Table Method for Analyzing Gene Mutation in Cancer Genome. ISBRA 2015: 12-23 - 2013
- [c41]Atsushi Niida, Georg Tremmel, Seiya Imoto, Satoru Miyano:
Multilayer Cluster Heat Map Visualizing Biological Tensor Data. BSB 2013: 116-125 - 2012
- [j32]Atsushi Niida, Seiya Imoto, Teppei Shimamura, Satoru Miyano:
Statistical model-based testing to evaluate the recurrence of genomic aberrations. Bioinform. 28(12): 115-120 (2012) - [j25]Shuichi Kawano, Teppei Shimamura, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Ryo Yoshida, Cristin G. Print, Satoru Miyano:
Identifying Gene Pathways Associated with Cancer Characteristics via Sparse Statistical Methods. IEEE ACM Trans. Comput. Biol. Bioinform. 9(4): 966-972 (2012) - 2010
- [j18]Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, André Fujita, Teppei Shimamura, Satoru Miyano:
Model-free unsupervised gene set screening based on information enrichment in expression profiles. Bioinform. 26(24): 3090-3097 (2010) - [c32]Shuichi Kawano, Teppei Shimamura, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Ryo Yoshida, Cristin G. Print, Satoru Miyano:
Discovering functional gene pathways associated with cancer heterogeneity via sparse supervised learning. BIBM 2010: 253-258 - [c31]Teppei Shimamura, Seiya Imoto, Atsushi Niida, Masao Nagasaki, Rui Yamaguchi, Satoru Miyano:
Network profiling analysis for generating modulator-dependent gene networks. BIBM Workshops 2010: 836 - 2009
- [j16]Atsushi Niida, Andrew D. Smith, Seiya Imoto, Hiroyuki Aburatani, Michael Q. Zhang, Tetsu Akiyama:
Gene set-based module discovery in the breast cancer transcriptome. BMC Bioinform. 10 (2009) - 2008
- [j11]Atsushi Niida, Andrew D. Smith, Seiya Imoto, Shuichi Tsutsumi, Hiroyuki Aburatani, Michael Q. Zhang, Tetsu Akiyama:
Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells. BMC Bioinform. 9 (2008)
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