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Bernhard Knapp
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Publications
- 2013
- [j9]Birgit Hischenhuber, Hans Havlicek, Jelena Todoric, Sonja Höllrigl-Binder, Wolfgang Schreiner, Bernhard Knapp:
Differential geometric analysis of alterations in MH α-helices. J. Comput. Chem. 34(21): 1862-1879 (2013) - [j8]Birgit Hischenhuber, Hans Havlicek, Jelena Todoric, Sonja Höllrigl-Binder, Wolfgang Schreiner, Bernhard Knapp:
Corrigendum: Differential geometric analysis of alterations in MH α-helices. J. Comput. Chem. 34(32): 2834 (2013) - 2012
- [j7]Wolfgang Schreiner, Rudolf Karch, Bernhard Knapp, Nevena Ilieva:
Relaxation Estimation of RMSD in Molecular Dynamics Immunosimulations. Comput. Math. Methods Medicine 2012: 173521:1-173521:9 (2012) - [j6]Birgit Hischenhuber, Florian Frommlet, Wolfgang Schreiner, Bernhard Knapp:
MH2c: Characterization of major histocompatibility α-helices - an information criterion approach. Comput. Phys. Commun. 183(7): 1481-1490 (2012) - 2011
- [j5]Bernhard Knapp, Verena Giczi, Reiner Ribarics, Wolfgang Schreiner:
PeptX: Using Genetic Algorithms to optimize peptides for MHC binding. BMC Bioinform. 12: 241 (2011) - [j4]Bernhard Knapp, Sophie Frantal, Michael Cibena, Wolfgang Schreiner, P. Bauer:
Is an Intuitive Convergence Definition of Molecular Dynamics Simulations Solely Based on the Root Mean Square Deviation Possible? J. Comput. Biol. 18(8): 997-1005 (2011) - 2010
- [j3]Bernhard Knapp, Nadja Lederer, Ulrich Omasits, Wolfgang Schreiner:
vmdICE: A plug-in for rapid evaluation of molecular dynamics simulations using VMD. J. Comput. Chem. 31(16): 2868-2873 (2010) - 2009
- [j2]Bernhard Knapp, Ulrich Omasits, Sophie Frantal, Wolfgang Schreiner:
A critical cross-validation of high throughput structural binding prediction methods for pMHC. J. Comput. Aided Mol. Des. 23(5): 301-307 (2009) - [j1]Sanjit Roopra, Bernhard Knapp, Ulrich Omasits, Wolfgang Schreiner:
jSimMacs for GROMACS: A Java Application for Advanced Molecular Dynamics Simulations with Remote Access Capability. J. Chem. Inf. Model. 49(10): 2412-2417 (2009)
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