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Trey Ideker

Name: dblp XML data dump
Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

◀ ▶ joint publications with Dexter Pratt

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Publications

2023
[j36]
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  dblp key:
  - journals/bioinformatics/PillichCCFGIKLOPP23
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  persistent URL:
  - https://dblp.org/rec/journals/bioinformatics/PillichCCFGIKLOPP23
Rudolf T. Pillich, Jing Chen, Christopher Churas, Dylan Fong, Benjamin M. Gyori, Trey Ideker, Klas Karis, Sophie N. Liu, Keiichiro Ono, Alexander R. Pico, Dexter Pratt:
NDEx IQuery: a multi-method network gene set analysis leveraging the Network Data Exchange. Bioinform. 39(3) (2023)
[i6]
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  - journals/corr/abs-2309-04019
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  - https://dblp.org/rec/journals/corr/abs-2309-04019
Mengzhou Hu, Sahar Alkhairy, Ingoo Lee, Rudolf T. Pillich, Robin Bachelder, Trey Ideker, Dexter Pratt:
Evaluation of large language models for discovery of gene set function. CoRR abs/2309.04019 (2023)
2020
[j34]
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  dblp key:
  - journals/ploscb/SinghalCCPFZI20
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  - https://dblp.org/rec/journals/ploscb/SinghalCCPFZI20
Akshat Singhal, Song Cao, Christopher Churas, Dexter Pratt, Santo Fortunato, Fan Zheng, Trey Ideker:
Multiscale community detection in Cytoscape. PLoS Comput. Biol. 16(10) (2020)
2018
[j30]
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  - journals/bioinformatics/AuerHIPIK18
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  - https://dblp.org/rec/journals/bioinformatics/AuerHIPIK18
Florian Auer, Zaynab Hammoud, Alexandr Ishkin, Dexter Pratt, Trey Ideker, Frank Kramer:
ndexr - an R package to interface with the network data exchange. Bioinform. 34(4): 716-717 (2018)
2017
[j27]
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  - journals/ploscb/CarlinDPSI17
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  - https://dblp.org/rec/journals/ploscb/CarlinDPSI17
Daniel E. Carlin, Barry Demchak, Dexter Pratt, Eric Sage, Trey Ideker:
Network propagation in the cytoscape cyberinfrastructure. PLoS Comput. Biol. 13(10) (2017)
2014
[j24]
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  dblp key:
  - journals/nar/DutkowskiOKYPDI14
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  - https://dblp.org/rec/journals/nar/DutkowskiOKYPDI14
Janusz Dutkowski, Keiichiro Ono, Michael Kramer, Michael Yu, Dexter Pratt, Barry Demchak, Trey Ideker:
NeXO Web: the NeXO ontology database and visualization platform. Nucleic Acids Res. 42(Database-Issue): 1269-1274 (2014)

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