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Benedict Paten

Name: dblp XML data dump
Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

◀ ▶ joint publications with Jordan Eizenga

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Publications

2023
[j33]
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  dblp key:
  - journals/bioinformatics/MarcoSolaEGPGM23
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  persistent URL:
  - https://dblp.org/rec/journals/bioinformatics/MarcoSolaEGPGM23
Santiago Marco-Sola, Jordan M. Eizenga, Andrea Guarracino, Benedict Paten, Erik Garrison, Miquel Moretó:
Optimal gap-affine alignment in O(s) space. Bioinform. 39(2) (2023)
2021
[j29]
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  - journals/bioinformatics/EizengaNKVCHHCP21
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  - https://dblp.org/rec/journals/bioinformatics/EizengaNKVCHHCP21
Jordan M. Eizenga, Adam M. Novak, Emily Kobayashi, Flavia Villani, Cecilia Cisar, Simon Heumos, Glenn Hickey, Vincenza Colonna, Benedict Paten, Erik Garrison:
Efficient dynamic variation graphs. Bioinform. 36(21): 5139-5144 (2021)
[c14]
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  dblp key:
  - conf/cie/EizengaLMP21
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  - https://dblp.org/rec/conf/cie/EizengaLMP21
Jordan M. Eizenga, Ryan Lorig-Roach, Melissa M. Meredith, Benedict Paten:
Walk-Preserving Transformation of Overlapped Sequence Graphs into Blunt Sequence Graphs with GetBlunted. CiE 2021: 169-177
2020
[j24]
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  dblp key:
  - journals/bioinformatics/ChangENSP20
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  - https://dblp.org/rec/journals/bioinformatics/ChangENSP20
Xian Chang, Jordan Eizenga, Adam M. Novak, Jouni Sirén, Benedict Paten:
Distance indexing and seed clustering in sequence graphs. Bioinform. 36(Supplement-1): i146-i153 (2020)
2018
[j19]
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  dblp key:
  - journals/jcb/PatenERNGH18
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  - https://dblp.org/rec/journals/jcb/PatenERNGH18
Benedict Paten, Jordan M. Eizenga, Yohei M. Rosen, Adam M. Novak, Erik Garrison, Glenn Hickey:
Superbubbles, Ultrabubbles, and Cacti. J. Comput. Biol. 25(7): 649-663 (2018)
[j18]
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  dblp key:
  - journals/jcb/HausslerSEPNNZM18
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  - https://dblp.org/rec/journals/jcb/HausslerSEPNNZM18
David Haussler, Maciej Smuga-Otto, Jordan M. Eizenga, Benedict Paten, Adam M. Novak, Sergei Nikitin, Maria Zueva, Dmitrii Miagkov:
A Flow Procedure for Linearization of Genome Sequence Graphs. J. Comput. Biol. 25(7): 664-676 (2018)
2017
[j16]
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  dblp key:
  - journals/bioinformatics/RosenEP17
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  - https://dblp.org/rec/journals/bioinformatics/RosenEP17
Yohei Rosen, Jordan Eizenga, Benedict Paten:
Modelling haplotypes with respect to reference cohort variation graphs. Bioinform. 33(14): i118-i123 (2017)
[c8]
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  dblp key:
  - conf/alcob/RosenEP17
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  - https://dblp.org/rec/conf/alcob/RosenEP17
Yohei Rosen, Jordan Eizenga, Benedict Paten:
Describing the Local Structure of Sequence Graphs. AlCoB 2017: 24-46

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