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ORCIDBibTeX records: Yin Zhang 0009
@article{DBLP:journals/titb/ZhaoYWZLW24,
author = {Yingwen Zhao and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Predicting Protein Functions Based on Heterogeneous Graph Attention
Technique},
journal = {{IEEE} J. Biomed. Health Informatics},
volume = {28},
number = {4},
pages = {2408--2415},
year = {2024},
url = {https://doi.org/10.1109/JBHI.2024.3357834},
doi = {10.1109/JBHI.2024.3357834},
timestamp = {Fri, 19 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/titb/ZhaoYWZLW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/ZhaoYHWZLW23,
author = {Yingwen Zhao and
Zhihao Yang and
Yongkai Hong and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Improving Protein Function Prediction by Adaptively Fusing Information
From Protein Sequences and Biomedical Literature},
journal = {{IEEE} J. Biomed. Health Informatics},
volume = {27},
number = {2},
pages = {1140--1148},
year = {2023},
url = {https://doi.org/10.1109/JBHI.2022.3221988},
doi = {10.1109/JBHI.2022.3221988},
timestamp = {Fri, 22 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/titb/ZhaoYHWZLW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/SunYWZLW22,
author = {Cong Sun and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {MRC4BioER: Joint extraction of biomedical entities and relations in
the machine reading comprehension framework},
journal = {J. Biomed. Informatics},
volume = {125},
pages = {103956},
year = {2022},
url = {https://doi.org/10.1016/j.jbi.2021.103956},
doi = {10.1016/J.JBI.2021.103956},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/SunYWZLW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhaoYHWZLW22,
author = {Yingwen Zhao and
Zhihao Yang and
Yongkai Hong and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
editor = {Donald A. Adjeroh and
Qi Long and
Xinghua Mindy Shi and
Fei Guo and
Xiaohua Hu and
Srinivas Aluru and
Giri Narasimhan and
Jianxin Wang and
Mingon Kang and
Ananda Mondal and
Jin Liu},
title = {Adaptive Multi-view Graph Convolutional Network for Gene Ontology
Annotations of Proteins},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022},
pages = {90--93},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/BIBM55620.2022.9995517},
doi = {10.1109/BIBM55620.2022.9995517},
timestamp = {Wed, 15 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhaoYHWZLW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/NingLYSWZLW22,
author = {Jinzhong Ning and
Jiru Li and
Zhihao Yang and
Yuanyuan Sun and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
editor = {Donald A. Adjeroh and
Qi Long and
Xinghua Mindy Shi and
Fei Guo and
Xiaohua Hu and
Srinivas Aluru and
Giri Narasimhan and
Jianxin Wang and
Mingon Kang and
Ananda Mondal and
Jin Liu},
title = {BioNER-CFEM: Biomedical Named Entity Recognition Based on Character
Feature Enhancement with Multimodal Method},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022},
pages = {787--790},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/BIBM55620.2022.9995331},
doi = {10.1109/BIBM55620.2022.9995331},
timestamp = {Fri, 22 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/NingLYSWZLW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunYWZLW21,
author = {Cong Sun and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Deep learning with language models improves named entity recognition
for PharmaCoNER},
journal = {{BMC} Bioinform.},
volume = {22},
number = {1},
pages = {602},
year = {2021},
url = {https://doi.org/10.1186/s12859-021-04260-y},
doi = {10.1186/S12859-021-04260-Y},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunYWZLW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/SunYWZLW21,
author = {Cong Sun and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Biomedical named entity recognition using {BERT} in the machine reading
comprehension framework},
journal = {J. Biomed. Informatics},
volume = {118},
pages = {103799},
year = {2021},
url = {https://doi.org/10.1016/j.jbi.2021.103799},
doi = {10.1016/J.JBI.2021.103799},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/SunYWZLW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/LiYWZLW21,
author = {Zhiheng Li and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Lexicon Knowledge Boosted Interaction Graph Network for Adverse Drug
Reaction Recognition From Social Media},
journal = {{IEEE} J. Biomed. Health Informatics},
volume = {25},
number = {7},
pages = {2777--2786},
year = {2021},
url = {https://doi.org/10.1109/JBHI.2020.3042549},
doi = {10.1109/JBHI.2020.3042549},
timestamp = {Thu, 07 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/titb/LiYWZLW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LiuY0ZLN21,
author = {Qiming Liu and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jinzhong Ning},
editor = {Yufei Huang and
Lukasz A. Kurgan and
Feng Luo and
Xiaohua Hu and
Yidong Chen and
Edward R. Dougherty and
Andrzej Kloczkowski and
Yaohang Li},
title = {{SGAT:} a Self-supervised Graph Attention Network for Biomedical Relation
Extraction},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2021, Houston, TX, USA, December 9-12, 2021},
pages = {698--701},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/BIBM52615.2021.9669699},
doi = {10.1109/BIBM52615.2021.9669699},
timestamp = {Wed, 10 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/LiuY0ZLN21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunYSWZLW20,
author = {Cong Sun and
Zhihao Yang and
Leilei Su and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Chemical-protein interaction extraction via Gaussian probability distribution
and external biomedical knowledge},
journal = {Bioinform.},
volume = {36},
number = {15},
pages = {4323--4330},
year = {2020},
url = {https://doi.org/10.1093/bioinformatics/btaa491},
doi = {10.1093/BIOINFORMATICS/BTAA491},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SunYSWZLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/LuoYCWZL20,
author = {Ling Luo and
Zhihao Yang and
Mingyu Cao and
Lei Wang and
Yin Zhang and
Hongfei Lin},
title = {A neural network-based joint learning approach for biomedical entity
and relation extraction from biomedical literature},
journal = {J. Biomed. Informatics},
volume = {103},
pages = {103384},
year = {2020},
url = {https://doi.org/10.1016/j.jbi.2020.103384},
doi = {10.1016/J.JBI.2020.103384},
timestamp = {Mon, 03 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/LuoYCWZL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/SunYWZLW20,
author = {Cong Sun and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Attention guided capsule networks for chemical-protein interaction
extraction},
journal = {J. Biomed. Informatics},
volume = {103},
pages = {103392},
year = {2020},
url = {https://doi.org/10.1016/j.jbi.2020.103392},
doi = {10.1016/J.JBI.2020.103392},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/SunYWZLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/LiYLWZLW20a,
author = {Nan Li and
Zhihao Yang and
Ling Luo and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {{KGHC:} a knowledge graph for hepatocellular carcinoma},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {20-S},
number = {3},
pages = {135},
year = {2020},
url = {https://doi.org/10.1186/s12911-020-1112-5},
doi = {10.1186/S12911-020-1112-5},
timestamp = {Mon, 03 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/LiYLWZLW20a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/XuYSLWZLW20,
author = {Yuan Xu and
Zhihao Yang and
Yawen Song and
Zhiheng Li and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
editor = {Taesung Park and
Young{-}Rae Cho and
Xiaohua Hu and
Illhoi Yoo and
Hyun Goo Woo and
Jianxin Wang and
Julio C. Facelli and
Seungyoon Nam and
Mingon Kang},
title = {Star-BiLSTM-LAN for Document-level Mutation-Disease Relation Extraction
from Biomedical Literature},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2020, Virtual Event, South Korea, December 16-19, 2020},
pages = {357--362},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/BIBM49941.2020.9313250},
doi = {10.1109/BIBM49941.2020.9313250},
timestamp = {Thu, 07 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/XuYSLWZLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/WangWYWZLW20,
author = {Erniu Wang and
Fan Wang and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
editor = {Taesung Park and
Young{-}Rae Cho and
Xiaohua Hu and
Illhoi Yoo and
Hyun Goo Woo and
Jianxin Wang and
Julio C. Facelli and
Seungyoon Nam and
Mingon Kang},
title = {Extracting biomedical relations via a multi-head attention based graph
convolutional network},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2020, Virtual Event, South Korea, December 16-19, 2020},
pages = {793--798},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/BIBM49941.2020.9313367},
doi = {10.1109/BIBM49941.2020.9313367},
timestamp = {Thu, 07 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/WangWYWZLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2009-01560,
author = {Cong Sun and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Biomedical named entity recognition using {BERT} in the machine reading
comprehension framework},
journal = {CoRR},
volume = {abs/2009.01560},
year = {2020},
url = {https://arxiv.org/abs/2009.01560},
eprinttype = {arXiv},
eprint = {2009.01560},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2009-01560.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/SunYLWZLW19,
author = {Cong Sun and
Zhihao Yang and
Ling Luo and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {A Deep Learning Approach With Deep Contextualized Word Representations
for Chemical-Protein Interaction Extraction From Biomedical Literature},
journal = {{IEEE} Access},
volume = {7},
pages = {151034--151046},
year = {2019},
url = {https://doi.org/10.1109/ACCESS.2019.2948155},
doi = {10.1109/ACCESS.2019.2948155},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/access/SunYLWZLW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/SunYWZLWYXZ19,
author = {Cong Sun and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang and
Liang Yang and
Kan Xu and
Yijia Zhang},
title = {Chemical-protein interaction extraction from biomedical literature:
a hierarchical recurrent convolutional neural network method},
journal = {Int. J. Data Min. Bioinform.},
volume = {22},
number = {2},
pages = {113--130},
year = {2019},
url = {https://doi.org/10.1504/IJDMB.2019.099725},
doi = {10.1504/IJDMB.2019.099725},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijdmb/SunYWZLWYXZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/LuoYWZLW19,
author = {Ling Luo and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {KeSACNN: a protein-protein interaction article classification approach
based on deep neural network},
journal = {Int. J. Data Min. Bioinform.},
volume = {22},
number = {2},
pages = {131--148},
year = {2019},
url = {https://doi.org/10.1504/IJDMB.2019.099724},
doi = {10.1504/IJDMB.2019.099724},
timestamp = {Mon, 03 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijdmb/LuoYWZLW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1911-09487,
author = {Cong Sun and
Zhihao Yang and
Leilei Su and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
title = {Chemical-protein Interaction Extraction via Gaussian Probability Distribution
and External Biomedical Knowledge},
journal = {CoRR},
volume = {abs/1911.09487},
year = {2019},
url = {http://arxiv.org/abs/1911.09487},
eprinttype = {arXiv},
eprint = {1911.09487},
timestamp = {Thu, 01 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1911-09487.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LuoYYZWLW18,
author = {Ling Luo and
Zhihao Yang and
Pei Yang and
Yin Zhang and
Lei Wang and
Hongfei Lin and
Jian Wang},
title = {An attention-based BiLSTM-CRF approach to document-level chemical
named entity recognition},
journal = {Bioinform.},
volume = {34},
number = {8},
pages = {1381--1388},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/btx761},
doi = {10.1093/BIOINFORMATICS/BTX761},
timestamp = {Mon, 03 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LuoYYZWLW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuYSZWZLWX18,
author = {Xiaoxia Liu and
Zhihao Yang and
Shengtian Sang and
Ziwei Zhou and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang and
Bo Xu},
title = {Identifying protein complexes based on node embeddings obtained from
protein-protein interaction networks},
journal = {{BMC} Bioinform.},
volume = {19},
number = {1},
pages = {332:1--332:14},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2364-2},
doi = {10.1186/S12859-018-2364-2},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuYSZWZLWX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/LuoYYZWWL18,
author = {Ling Luo and
Zhihao Yang and
Pei Yang and
Yin Zhang and
Lei Wang and
Jian Wang and
Hongfei Lin},
title = {A neural network approach to chemical and gene/protein entity recognition
in patents},
journal = {J. Cheminformatics},
volume = {10},
number = {1},
pages = {65:1--65:10},
year = {2018},
url = {https://doi.org/10.1186/s13321-018-0318-3},
doi = {10.1186/S13321-018-0318-3},
timestamp = {Mon, 03 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcheminf/LuoYYZWWL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LiYZLLWZLWZ18,
author = {Qingqing Li and
Zhihao Yang and
Zhehuan Zhao and
Ling Luo and
Zhiheng Li and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang and
Yijia Zhang},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {{HMNPPID:} {A} Database of Protein-protein Interactions Associated
with Human Malignant Neoplasms},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {1--3},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621402},
doi = {10.1109/BIBM.2018.8621402},
timestamp = {Thu, 07 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/LiYZLLWZLWZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LiuYSWZLXZYXW18,
author = {Xiaoxia Liu and
Zhihao Yang and
Shengtian Sang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Bo Xu and
Yijia Zhang and
Liang Yang and
Kan Xu and
Jian Wang},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {{PC-SENE:} {A} node embedding based method for protein complex detection},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {191--192},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621338},
doi = {10.1109/BIBM.2018.8621338},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/LiuYSWZLXZYXW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LuoYWZLWYXZ18,
author = {Ling Luo and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang and
Liang Yang and
Kan Xu and
Yijia Zhang},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Protein-Protein Interaction Article Classification: {A} Knowledge-enriched
Self-Attention Convolutional Neural Network Approach},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {467--469},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621362},
doi = {10.1109/BIBM.2018.8621362},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/LuoYWZLWYXZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LiYLWZLWYXZ18,
author = {Qingqing Li and
Zhihao Yang and
Ling Luo and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang and
Liang Yang and
Kan Xu and
Yijia Zhang},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {A multi-task learning based approach to biomedical entity relation
extraction},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {680--682},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621284},
doi = {10.1109/BIBM.2018.8621284},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/LiYLWZLWYXZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/SangYLWZLWYXZ18,
author = {Shengtian Sang and
Zhihao Yang and
Xiaoxia Liu and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang and
Liang Yang and
Kan Xu and
Yijia Zhang},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {A Knowledge Graph based Bidirectional Recurrent Neural Network Method
for Literature-based Discovery},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {751--752},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621423},
doi = {10.1109/BIBM.2018.8621423},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/SangYLWZLWYXZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/SunYWZLWYXZ18,
author = {Cong Sun and
Zhihao Yang and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang and
Liang Yang and
Kan Xu and
Yijia Zhang},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Hierarchical Recurrent Convolutional Neural Network for Chemical-protein
Relation Extraction from Biomedical Literature},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {765--766},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621159},
doi = {10.1109/BIBM.2018.8621159},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/SunYWZLWYXZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/TianGWXWZ17,
author = {Zhen Tian and
Maozu Guo and
Chunyu Wang and
Linlin Xing and
Lei Wang and
Yin Zhang},
title = {Constructing an integrated gene similarity network for the identification
of disease genes},
journal = {J. Biomed. Semant.},
volume = {8-S},
number = {1},
pages = {27--41},
year = {2017},
url = {https://doi.org/10.1186/s13326-017-0141-1},
doi = {10.1186/S13326-017-0141-1},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/TianGWXWZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/XingGLWWZ16,
author = {Linlin Xing and
Maozu Guo and
Xiaoyan Liu and
Chun{-}yu Wang and
Lei Wang and
Yin Zhang},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {Reconstructing gene regulatory network based on candidate auto selection
method},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {235--241},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822524},
doi = {10.1109/BIBM.2016.7822524},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/XingGLWWZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhaoYLZWLW16,
author = {Zhehuan Zhao and
Zhihao Yang and
Ling Luo and
Yin Zhang and
Lei Wang and
Hongfei Lin and
Jian Wang},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {{ML-CNN:} {A} novel deep learning based disease named entity recognition
architecture},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {794},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822625},
doi = {10.1109/BIBM.2016.7822625},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhaoYLZWLW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LiYLWGZW16,
author = {Zhiheng Li and
Zhihao Yang and
Hongfei Lin and
Jian Wang and
Yingyi Gui and
Yin Zhang and
Lei Wang},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {CIDExtractor: {A} chemical-induced disease relation extraction system
for biomedical literature},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {994--1001},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822658},
doi = {10.1109/BIBM.2016.7822658},
timestamp = {Thu, 07 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/LiYLWGZW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/CheLGZWZ16,
author = {Kai Che and
Xiaoyan Liu and
Maozu Guo and
Junwei Zhang and
Lei Wang and
Yin Zhang},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {Epistasis detection using a permutation-based Gradient Boosting Machine},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {1247--1252},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822697},
doi = {10.1109/BIBM.2016.7822697},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/CheLGZWZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhouGYLWZLW16,
author = {Ziwei Zhou and
Yingyi Gui and
Zhihao Yang and
Xiaoxia Liu and
Lei Wang and
Yin Zhang and
Hongfei Lin and
Jian Wang},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {Disease-specific protein complex detection in the human protein interaction
network with a supervised learning method},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {1296--1301},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822705},
doi = {10.1109/BIBM.2016.7822705},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhouGYLWZLW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/TianGWXWZ16,
author = {Zhen Tian and
Maozu Guo and
Chunyu Wang and
Linlin Xing and
Lei Wang and
Yin Zhang},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {Constructing an integrated gene similarity network for the identification
of disease genes},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {1663--1668},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822768},
doi = {10.1109/BIBM.2016.7822768},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/TianGWXWZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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