BibTeX records: Yoichi Takenaka

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@article{DBLP:journals/tcbb/KapilevichSMT19,
  author    = {Viacheslav Kapilevich and
               Shigeto Seno and
               Hideo Matsuda and
               Yoichi Takenaka},
  title     = {Chromatin 3D Reconstruction from Chromosomal Contacts Using a Genetic
               Algorithm},
  journal   = {{IEEE/ACM} Trans. Comput. Biology Bioinform.},
  volume    = {16},
  number    = {5},
  pages     = {1620--1626},
  year      = {2019},
  url       = {https://doi.org/10.1109/TCBB.2018.2814995},
  doi       = {10.1109/TCBB.2018.2814995},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/tcbb/KapilevichSMT19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TakenakaMSM18,
  author    = {Yoichi Takenaka and
               Kazuma Mikami and
               Shigeto Seno and
               Hideo Matsuda},
  title     = {Automated transition analysis of activated gene regulation during
               diauxic nutrient shift in Escherichia coli and adipocyte differentiation
               in mouse cells},
  journal   = {{BMC} Bioinform.},
  volume    = {19-S},
  number    = {4},
  pages     = {49--59},
  year      = {2018},
  url       = {https://doi.org/10.1186/s12859-018-2072-y},
  doi       = {10.1186/s12859-018-2072-y},
  timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/TakenakaMSM18.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/SotaSTNM16,
  author    = {Yoshiaki Sota and
               Shigeto Seno and
               Yoichi Takenaka and
               Shinzaburo Noguchi and
               Hideo Matsuda},
  title     = {Comparative Analysis of Transformation Methods for Gene Expression
               Profiles in Breast Cancer Datasets},
  booktitle = {16th {IEEE} International Conference on Bioinformatics and Bioengineering,
               {BIBE} 2016, Taichung, Taiwan, October 31 - November 2, 2016},
  pages     = {328--333},
  publisher = {{IEEE} Computer Society},
  year      = {2016},
  url       = {https://doi.org/10.1109/BIBE.2016.51},
  doi       = {10.1109/BIBE.2016.51},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/conf/bibe/SotaSTNM16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/TakenakaSM15,
  author    = {Yoichi Takenaka and
               Shigeto Seno and
               Hideo Matsuda},
  title     = {Detecting shifts in gene regulatory networks during time-course experiments
               at single-time-point temporal resolution},
  journal   = {J. Bioinform. Comput. Biol.},
  volume    = {13},
  number    = {5},
  year      = {2015},
  url       = {https://doi.org/10.1142/S0219720015430027},
  doi       = {10.1142/S0219720015430027},
  timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/jbcb/TakenakaSM15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kse/TakenakaW15,
  author    = {Yoichi Takenaka and
               Takeshi Wakao},
  editor    = {Bernard M{\'{e}}rialdo and
               Minh Le Nguyen and
               Duy{-}Dinh Le and
               Duc Anh Duong and
               Satoshi Tojo},
  title     = {Similarity Measure among Structures of Local Government Statute Books
               Based on Tree Edit Distance},
  booktitle = {2015 Seventh International Conference on Knowledge and Systems Engineering,
               {KSE} 2015, Ho Chi Minh City, Vietnam, October 8-10, 2015},
  pages     = {49--54},
  publisher = {{IEEE}},
  year      = {2015},
  url       = {https://doi.org/10.1109/KSE.2015.57},
  doi       = {10.1109/KSE.2015.57},
  timestamp = {Wed, 16 Oct 2019 14:14:54 +0200},
  biburl    = {https://dblp.org/rec/conf/kse/TakenakaW15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WatanabeSTM12,
  author    = {Yukito Watanabe and
               Shigeto Seno and
               Yoichi Takenaka and
               Hideo Matsuda},
  title     = {An estimation method for inference of gene regulatory net-work using
               Bayesian network with uniting of partial problems},
  journal   = {{BMC} Genom.},
  volume    = {13},
  number    = {{S-1}},
  pages     = {S12},
  year      = {2012},
  url       = {https://doi.org/10.1186/1471-2164-13-S1-S12},
  doi       = {10.1186/1471-2164-13-S1-S12},
  timestamp = {Mon, 11 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/bmcgenomics/WatanabeSTM12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mbec/MaekawaMTM07,
  author    = {Sami Maekawa and
               Atsuko Matsumoto and
               Yoichi Takenaka and
               Hideo Matsuda},
  title     = {Tissue-specific functions based on information content of gene ontology
               using cap analysis gene expression},
  journal   = {Medical Biol. Eng. Comput.},
  volume    = {45},
  number    = {11},
  pages     = {1029--1036},
  year      = {2007},
  url       = {https://doi.org/10.1007/s11517-007-0274-y},
  doi       = {10.1007/s11517-007-0274-y},
  timestamp = {Wed, 27 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/mbec/MaekawaMTM07.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KawajiTM04,
  author    = {Hideya Kawaji and
               Yoichi Takenaka and
               Hideo Matsuda},
  title     = {Graph-based clustering for finding distant relationships in a large
               set of protein sequences},
  journal   = {Bioinform.},
  volume    = {20},
  number    = {2},
  pages     = {243--252},
  year      = {2004},
  url       = {https://doi.org/10.1093/bioinformatics/btg397},
  doi       = {10.1093/bioinformatics/btg397},
  timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bioinformatics/KawajiTM04.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/TakiTTM04,
  author    = {Kohei Taki and
               Reiji Teramoto and
               Yoichi Takenaka and
               Hideo Matsuda},
  title     = {Inference of Gene Regulatory Network Based on Module Network Model
               with Gene Functional Classifications},
  booktitle = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
               Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages     = {632--633},
  publisher = {{IEEE} Computer Society},
  year      = {2004},
  url       = {https://doi.org/10.1109/CSB.2004.1332524},
  doi       = {10.1109/CSB.2004.1332524},
  timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
  biburl    = {https://dblp.org/rec/conf/csb/TakiTTM04.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MiyakeTM04,
  author    = {Shoko Miyake and
               Yoichi Takenaka and
               Hideo Matsuda},
  title     = {A Graph Analysis Method to Detect Metabolic Sub-Networks Based on
               Phylogenetic Profile},
  booktitle = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
               Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages     = {634--635},
  publisher = {{IEEE} Computer Society},
  year      = {2004},
  url       = {https://doi.org/10.1109/CSB.2004.1332525},
  doi       = {10.1109/CSB.2004.1332525},
  timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
  biburl    = {https://dblp.org/rec/conf/csb/MiyakeTM04.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dasfaa/MiyakeTTM03,
  author    = {Shoko Miyake and
               Yukako Tohsato and
               Yoichi Takenaka and
               Hideo Matsuda},
  title     = {Clustering Method for Comparative Analysis between Genomes and Pathways},
  booktitle = {Eighth International Conference on Database Systems for Advanced Applications
               {(DASFAA} '03), March 26-28, 2003, Kyoto, Japan},
  pages     = {327--334},
  publisher = {{IEEE} Computer Society},
  year      = {2003},
  url       = {https://doi.org/10.1109/DASFAA.2003.1192398},
  doi       = {10.1109/DASFAA.2003.1192398},
  timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/conf/dasfaa/MiyakeTTM03.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dna/TakenakaH02,
  author    = {Yoichi Takenaka and
               Akihiro Hashimoto},
  editor    = {Masami Hagiya and
               Azuma Ohuchi},
  title     = {Shortening the Computational Time of the Fluorescent {DNA} Computing},
  booktitle = {{DNA} Computing, 8th International Workshop on {DNA} Based Computers,
               DNA8, Sapporo, Japan, June 10-13, 2002, Revised Papers},
  series    = {Lecture Notes in Computer Science},
  volume    = {2568},
  pages     = {85--94},
  publisher = {Springer},
  year      = {2002},
  url       = {https://doi.org/10.1007/3-540-36440-4\_8},
  doi       = {10.1007/3-540-36440-4\_8},
  timestamp = {Tue, 14 May 2019 10:00:40 +0200},
  biburl    = {https://dblp.org/rec/conf/dna/TakenakaH02.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dna/YoichiA01,
  author    = {Yoichi Takenaka and
               Akihiro Hashimoto},
  editor    = {Natasa Jonoska and
               Nadrian C. Seeman},
  title     = {A Proposal of {DNA} Computing on Beads with Application to {SAT} Problems},
  booktitle = {{DNA} Computing, 7th International Workshop on DNA-Based Computers,
               DNA7, Tampa, Florida, USA, June 10-13, 2001, Revised Papers},
  series    = {Lecture Notes in Computer Science},
  volume    = {2340},
  pages     = {182--190},
  publisher = {Springer},
  year      = {2001},
  url       = {https://doi.org/10.1007/3-540-48017-X\_17},
  doi       = {10.1007/3-540-48017-X\_17},
  timestamp = {Tue, 14 May 2019 10:00:40 +0200},
  biburl    = {https://dblp.org/rec/conf/dna/YoichiA01.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/TakenakaF99,
  author    = {Yoichi Takenaka and
               Nobuo Funabiki},
  title     = {A non-feedback neuron filter algorithm for separated board-level routing
               problems in FPGA-based logic emulation systems},
  booktitle = {International Joint Conference Neural Networks, {IJCNN} 1999, Washington,
               DC, USA, July 10-16, 1999},
  pages     = {3342--3347},
  publisher = {{IEEE}},
  year      = {1999},
  url       = {https://doi.org/10.1109/IJCNN.1999.836197},
  doi       = {10.1109/IJCNN.1999.836197},
  timestamp = {Tue, 30 Jan 2018 17:48:40 +0100},
  biburl    = {https://dblp.org/rec/conf/ijcnn/TakenakaF99.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/FunabikiTH99,
  author    = {Nobuo Funabiki and
               Yoichi Takenaka and
               Teruo Higashino},
  title     = {A gradual neural network approach for broadcast scheduling in packet
               radio networks},
  booktitle = {International Joint Conference Neural Networks, {IJCNN} 1999, Washington,
               DC, USA, July 10-16, 1999},
  pages     = {3952--3957},
  publisher = {{IEEE}},
  year      = {1999},
  url       = {https://doi.org/10.1109/IJCNN.1999.830789},
  doi       = {10.1109/IJCNN.1999.830789},
  timestamp = {Tue, 30 Jan 2018 17:48:40 +0100},
  biburl    = {https://dblp.org/rec/conf/ijcnn/FunabikiTH99.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/smc/TakenakaF98,
  author    = {Yoichi Takenaka and
               Nobuo Funabiki},
  title     = {An improved genetic algorithm using the convex hull for traveling
               salesman problem},
  booktitle = {Proceedings of the {IEEE} International Conference on Systems, Man
               and Cybernetics, {SMC} 1998, Hyatt Regency La Jolla, San Diego, California,
               USA, October 11-14,1998},
  pages     = {2279--2284},
  publisher = {{IEEE}},
  year      = {1998},
  url       = {https://doi.org/10.1109/ICSMC.1998.724995},
  doi       = {10.1109/ICSMC.1998.724995},
  timestamp = {Wed, 16 Oct 2019 14:14:51 +0200},
  biburl    = {https://dblp.org/rec/conf/smc/TakenakaF98.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bc/FunabikiTN97,
  author    = {Nobuo Funabiki and
               Yoichi Takenaka and
               Seishi Nishikawa},
  title     = {A maximum neural network approach for \emph{N} -queens problems},
  journal   = {Biological Cybernetics},
  volume    = {76},
  number    = {4},
  pages     = {251--255},
  year      = {1997},
  url       = {https://doi.org/10.1007/s004220050337},
  doi       = {10.1007/s004220050337},
  timestamp = {Sun, 28 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/bc/FunabikiTN97.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icnn/TakenakaFN97,
  author    = {Yoichi Takenaka and
               Nobuo Funabiki and
               Seishi Nishikawa},
  title     = {A proposal of "neuron mask" in neural network algorithm
               for combinatorial optimization problems},
  booktitle = {Proceedings of International Conference on Neural Networks (ICNN'97),
               Houston, TX, USA, June 9-12, 1997},
  pages     = {1289--1294},
  publisher = {{IEEE}},
  year      = {1997},
  url       = {https://doi.org/10.1109/ICNN.1997.616220},
  doi       = {10.1109/ICNN.1997.616220},
  timestamp = {Fri, 16 Aug 2019 17:38:27 +0200},
  biburl    = {https://dblp.org/rec/conf/icnn/TakenakaFN97.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
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