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ORCIDBibTeX records: Shigeto Seno
@article{DBLP:journals/biosystems/HosodaSMMOKK24,
author = {Kazufumi Hosoda and
Shigeto Seno and
Naomi Murakami and
Hideo Matsuda and
Yutaka Osada and
Rikuto Kamiura and
Michio Kondoh},
title = {Synthetic model ecosystem of 12 cryopreservable microbial species
allowing for a noninvasive approach},
journal = {Biosyst.},
volume = {235},
pages = {105087},
year = {2024},
url = {https://doi.org/10.1016/j.biosystems.2023.105087},
doi = {10.1016/J.BIOSYSTEMS.2023.105087},
timestamp = {Fri, 08 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biosystems/HosodaSMMOKK24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/entropy/HosodaSKMK23,
author = {Kazufumi Hosoda and
Shigeto Seno and
Rikuto Kamiura and
Naomi Murakami and
Michio Kondoh},
title = {Biodiversity and Constrained Information Dynamics in Ecosystems: {A}
Framework for Living Systems},
journal = {Entropy},
volume = {25},
number = {12},
pages = {1624},
year = {2023},
url = {https://doi.org/10.3390/e25121624},
doi = {10.3390/E25121624},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/entropy/HosodaSKMK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbet/NagamuraSSMM23,
author = {Toru Nagamura and
Shigeto Seno and
Hironori Shigeta and
Tomohiro Mashita and
Hideo Matsuda},
title = {Cell Tracking via Reinforcement Learning with Microscopic Image Simulator},
booktitle = {Proceedings of the 2023 13th International Conference on Biomedical
Engineering and Technology, {ICBET} 2023, Tokyo, Japan, June 15-18,
2023},
pages = {16--22},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3620679.3620682},
doi = {10.1145/3620679.3620682},
timestamp = {Sun, 31 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbet/NagamuraSSMM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbet/NishiYSHM23,
author = {Koki Nishi and
Junko Yoshida and
Shigeto Seno and
Kyoji Horie and
Hideo Matsuda},
title = {Pseudotime-based Deep Learning of Gene Regulatory Relationships from
Single-Cell Expression Data},
booktitle = {Proceedings of the 2023 13th International Conference on Biomedical
Engineering and Technology, {ICBET} 2023, Tokyo, Japan, June 15-18,
2023},
pages = {56--62},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3620679.3620688},
doi = {10.1145/3620679.3620688},
timestamp = {Sun, 31 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbet/NishiYSHM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2204-13361,
author = {Kazufumi Hosoda and
Keigo Nishida and
Shigeto Seno and
Tomohiro Mashita and
Hideki Kashioka and
Izumi Ohzawa},
title = {It's {DONE:} Direct ONE-shot learning without training optimization},
journal = {CoRR},
volume = {abs/2204.13361},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2204.13361},
doi = {10.48550/ARXIV.2204.13361},
eprinttype = {arXiv},
eprint = {2204.13361},
timestamp = {Mon, 02 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2204-13361.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2207-00815,
author = {Kazufumi Hosoda and
Shigeto Seno and
Tsutomu Murata},
title = {Simulating reaction time for Eureka effect in visual object recognition
using artificial neural network},
journal = {CoRR},
volume = {abs/2207.00815},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2207.00815},
doi = {10.48550/ARXIV.2207.00815},
eprinttype = {arXiv},
eprint = {2207.00815},
timestamp = {Wed, 06 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2207-00815.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FujimotoMRSSUIB21,
author = {Kenji Fujimoto and
Tsubasa Mizugaki and
Utkrisht Rajkumar and
Hironori Shigeta and
Shigeto Seno and
Yutaka Uchida and
Masaru Ishii and
Vineet Bafna and
Hideo Matsuda},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A CNN-based cell tracking method for multi-slice intravital imaging
data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {35:1--35:7},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469559},
doi = {10.1145/3459930.3469559},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FujimotoMRSSUIB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/SotaSSOSNM19,
author = {Yoshiaki Sota and
Shigeto Seno and
Hironori Shigeta and
Naoki Osato and
Masafumi Shimoda and
Shinzaburo Noguchi and
Hideo Matsuda},
title = {Improvement of detection performance of fusion genes from RNA-seq
data by clustering short reads},
journal = {J. Bioinform. Comput. Biol.},
volume = {17},
number = {3},
pages = {1940008:1--1940008:12},
year = {2019},
url = {https://doi.org/10.1142/S0219720019400080},
doi = {10.1142/S0219720019400080},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/SotaSSOSNM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/KapilevichSMT19,
author = {Viacheslav Kapilevich and
Shigeto Seno and
Hideo Matsuda and
Yoichi Takenaka},
title = {Chromatin 3D Reconstruction from Chromosomal Contacts Using a Genetic
Algorithm},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {16},
number = {5},
pages = {1620--1626},
year = {2019},
url = {https://doi.org/10.1109/TCBB.2018.2814995},
doi = {10.1109/TCBB.2018.2814995},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/KapilevichSMT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/ShigetaSNUKIM19,
author = {Hironori Shigeta and
Shigeto Seno and
Shino Nishizawa and
Yutaka Uchida and
Junichi Kikuta and
Masaru Ishii and
Hideo Matsuda},
title = {Analyzing Leukocyte Migration Trajectories by Deformable Image Matching},
booktitle = {19th {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2019, Athens, Greece, October 28-30, 2019},
pages = {94--98},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBE.2019.00025},
doi = {10.1109/BIBE.2019.00025},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/ShigetaSNUKIM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/OsatoSSUKIM19,
author = {Naoki Osato and
Hironori Shigeta and
Shigeto Seno and
Yutaka Uchida and
Junichi Kikuta and
Masaru Ishii and
Hideo Matsuda},
editor = {Illhoi Yoo and
Jinbo Bi and
Xiaohua Hu},
title = {Single-cell Transcriptome Analysis of Mouse Leukocytes in Inflammatory
Stimulation},
booktitle = {2019 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2019, San Diego, CA, USA, November 18-21, 2019},
pages = {1229--1231},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBM47256.2019.8983394},
doi = {10.1109/BIBM47256.2019.8983394},
timestamp = {Fri, 09 Apr 2021 17:11:15 +0200},
biburl = {https://dblp.org/rec/conf/bibm/OsatoSSUKIM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TakenakaMSM18,
author = {Yoichi Takenaka and
Kazuma Mikami and
Shigeto Seno and
Hideo Matsuda},
title = {Automated transition analysis of activated gene regulation during
diauxic nutrient shift in Escherichia coli and adipocyte differentiation
in mouse cells},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {49--59},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2072-y},
doi = {10.1186/S12859-018-2072-Y},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TakenakaMSM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/SotaSSOSNM18,
author = {Yoshiaki Sota and
Shigeto Seno and
Hironori Shigeta and
Naoki Osato and
Masafumi Shimoda and
Shinzaburo Noguchi and
Hideo Matsuda},
title = {Detection of Fusion Genes from Human Breast Cancer Cell-Line RNA-Seq
Data Using Shifted Short Read Clustering},
booktitle = {18th {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2018, Taichung, Taiwan, October 29-31, 2018},
pages = {159--162},
publisher = {{IEEE}},
year = {2018},
url = {https://doi.org/10.1109/BIBE.2018.00038},
doi = {10.1109/BIBE.2018.00038},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibe/SotaSSOSNM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/EtoHSM18,
author = {Mitsuhiro Eto and
Wataru Hirota and
Shigeto Seno and
Hideo Matsuda},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Asymmetric Integration of Single-Cell Transcriptomic Data using Latent
Dirichlet Allocation and Procrustes Analysis},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {2129--2135},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621115},
doi = {10.1109/BIBM.2018.8621115},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/EtoHSM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/ShigetaMKSTIM17,
author = {Hironori Shigeta and
Tomohiro Mashita and
Junichi Kikuta and
Shigeto Seno and
Haruo Takemura and
Masaru Ishii and
Hideo Matsuda},
title = {Bone marrow cavity segmentation using graph-cuts with wavelet-based
texture feature},
journal = {J. Bioinform. Comput. Biol.},
volume = {15},
number = {5},
pages = {1740004:1--1740004:16},
year = {2017},
url = {https://doi.org/10.1142/S0219720017400042},
doi = {10.1142/S0219720017400042},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/ShigetaMKSTIM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/SotaSTNM16,
author = {Yoshiaki Sota and
Shigeto Seno and
Yoichi Takenaka and
Shinzaburo Noguchi and
Hideo Matsuda},
title = {Comparative Analysis of Transformation Methods for Gene Expression
Profiles in Breast Cancer Datasets},
booktitle = {16th {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2016, Taichung, Taiwan, October 31 - November 2, 2016},
pages = {328--333},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBE.2016.51},
doi = {10.1109/BIBE.2016.51},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibe/SotaSTNM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpr/ShigetaMKSTMI16,
author = {Hironori Shigeta and
Tomohiro Mashita and
Junichi Kikuta and
Shigeto Seno and
Haruo Takemura and
Hideo Matsuda and
Masaru Ishii},
title = {A bone marrow cavity segmentation method using wavelet-based texture
feature},
booktitle = {23rd International Conference on Pattern Recognition, {ICPR} 2016,
Canc{\'{u}}n, Mexico, December 4-8, 2016},
pages = {2133--2138},
publisher = {{IEEE}},
year = {2016},
url = {https://doi.org/10.1109/ICPR.2016.7899951},
doi = {10.1109/ICPR.2016.7899951},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icpr/ShigetaMKSTMI16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/TakenakaSM15,
author = {Yoichi Takenaka and
Shigeto Seno and
Hideo Matsuda},
title = {Detecting shifts in gene regulatory networks during time-course experiments
at single-time-point temporal resolution},
journal = {J. Bioinform. Comput. Biol.},
volume = {13},
number = {5},
pages = {1543002:1--1543002:18},
year = {2015},
url = {https://doi.org/10.1142/S0219720015430027},
doi = {10.1142/S0219720015430027},
timestamp = {Wed, 24 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbcb/TakenakaSM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpr/ShigetaMKKSTMI14,
author = {Hironori Shigeta and
Tomohiro Mashita and
Takeshi Kaneko and
Junichi Kikuta and
Shigeto Seno and
Haruo Takemura and
Hideo Matsuda and
Masaru Ishii},
title = {A Graph Cuts Image Segmentation Method for Quantifying Barrier Permeation
in Bone Tissue},
booktitle = {1st Workshop on Pattern Recognition Techniques for Indirect Immunofluorescence
Images, I3A@ICPR 2014, Stockholm, Sweden, August 24, 2014},
pages = {16--19},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/I3A.2014.22},
doi = {10.1109/I3A.2014.22},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icpr/ShigetaMKKSTMI14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpr/MashitaUSKKSIMT14,
author = {Tomohiro Mashita and
Jun Usam and
Hironori Shigeta and
Yoshihiro Kuroda and
Junichi Kikuta and
Shigeto Seno and
Masaru Ishii and
Hideo Matsuda and
Haruo Takemura},
title = {A Segmentation Method for Bone Marrow Cavity Imaging Using Graph Cuts},
booktitle = {1st Workshop on Pattern Recognition Techniques for Indirect Immunofluorescence
Images, I3A@ICPR 2014, Stockholm, Sweden, August 24, 2014},
pages = {20--23},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/I3A.2014.21},
doi = {10.1109/I3A.2014.21},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icpr/MashitaUSKKSIMT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WatanabeSTM12,
author = {Yukito Watanabe and
Shigeto Seno and
Yoichi Takenaka and
Hideo Matsuda},
title = {An estimation method for inference of gene regulatory net-work using
Bayesian network with uniting of partial problems},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S12},
doi = {10.1186/1471-2164-13-S1-S12},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WatanabeSTM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SenoTM02,
author = {Shigeto Seno and
Reiji Teramoto and
Hideo Matsuda},
title = {P-quasi Complete Linkage Analysis for Gene-Expression Data},
booktitle = {1st {IEEE} Computer Society Bioinformatics Conference, {CSB} 2002,
Stanford, CA, USA, August 14-16, 2002},
pages = {342},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/CSB.2002.1039365},
doi = {10.1109/CSB.2002.1039365},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/SenoTM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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