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ORCIDBibTeX records: Carlile Lavor
@article{DBLP:journals/ojmo/LibertiILM23,
author = {Leo Liberti and
Gabriele Iommazzo and
Carlile Lavor and
Nelson Maculan},
title = {Cycle-based formulations in Distance Geometry},
journal = {Open J. Math. Optim.},
volume = {4},
pages = {1--16},
year = {2023},
url = {https://doi.org/10.5802/ojmo.18},
doi = {10.5802/OJMO.18},
timestamp = {Thu, 11 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ojmo/LibertiILM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/qip/HrdinaHNSALVE23,
author = {Jaroslav Hrdina and
Dietmar Hildenbrand and
Ales N{\'{a}}vrat and
Christian Steinmetz and
Rafael Alves and
Carlile Lavor and
Petr Vas{\'{\i}}k and
Ivan Eryganov},
title = {Quantum Register Algebra: the mathematical language for quantum computing},
journal = {Quantum Inf. Process.},
volume = {22},
number = {9},
pages = {328},
year = {2023},
url = {https://doi.org/10.1007/s11128-023-04086-y},
doi = {10.1007/S11128-023-04086-Y},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/qip/HrdinaHNSALVE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SouzaML23,
author = {Michael Souza and
Nilton Maia and
Carlile Lavor},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {The Ordered Covering Problem in Distance Geometry},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {255--266},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_20},
doi = {10.1007/978-981-99-7074-2\_20},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SouzaML23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eswa/LavorAF22,
author = {Carlile Lavor and
Rafael Alves and
Leandro A. F. Fernandes},
title = {Linear and geometric algebra approaches for sphere and spherical shell
intersections in Rn},
journal = {Expert Syst. Appl.},
volume = {187},
pages = {115993},
year = {2022},
url = {https://doi.org/10.1016/j.eswa.2021.115993},
doi = {10.1016/J.ESWA.2021.115993},
timestamp = {Wed, 03 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/eswa/LavorAF22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/LabiakLS22,
author = {Rodrigo Labiak and
Carlile Lavor and
Michael Souza},
title = {Distance geometry and protein loop modeling},
journal = {J. Comput. Chem.},
volume = {43},
number = {5},
pages = {349--358},
year = {2022},
url = {https://doi.org/10.1002/jcc.26796},
doi = {10.1002/JCC.26796},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/LabiakLS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/Baez-SanchezLM22,
author = {Andr{\'{e}}s D. B{\'{a}}ez{-}S{\'{a}}nchez and
Carlile Lavor and
Antonio Mucherino},
title = {Preface: special issue on optimization in distance geometry},
journal = {J. Glob. Optim.},
volume = {83},
number = {1},
pages = {1--2},
year = {2022},
url = {https://doi.org/10.1007/s10898-021-01106-y},
doi = {10.1007/S10898-021-01106-Y},
timestamp = {Thu, 28 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/Baez-SanchezLM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/DuxburyLLN22,
author = {Phillip M. Duxbury and
Carlile Lavor and
Leo Liberti and
Luiz Ledu{\'{\i}}no de Salles Neto},
title = {Unassigned distance geometry and molecular conformation problems},
journal = {J. Glob. Optim.},
volume = {83},
number = {1},
pages = {73--82},
year = {2022},
url = {https://doi.org/10.1007/s10898-021-01023-0},
doi = {10.1007/S10898-021-01023-0},
timestamp = {Wed, 18 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/DuxburyLLN22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/qip/LavorMOP22,
author = {Carlile Lavor and
Franklin L. Marquezino and
Andr{\^{e}}s Oliveira and
Renato Portugal},
title = {A quantum approach to the discretizable molecular distance geometry
problem},
journal = {Quantum Inf. Process.},
volume = {21},
number = {7},
pages = {239},
year = {2022},
url = {https://doi.org/10.1007/s11128-022-03583-w},
doi = {10.1007/S11128-022-03583-W},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/qip/LavorMOP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/GoncalvesLLS21,
author = {Douglas Soares Gon{\c{c}}alves and
Carlile Lavor and
Leo Liberti and
Michael Souza},
title = {A New Algorithm for the \({}^{\mbox{K}}\)DMDGP Subclass of Distance
Geometry Problems with Exact Distances},
journal = {Algorithmica},
volume = {83},
number = {8},
pages = {2400--2426},
year = {2021},
url = {https://doi.org/10.1007/s00453-021-00835-6},
doi = {10.1007/S00453-021-00835-6},
timestamp = {Thu, 29 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/GoncalvesLLS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/amc/LavorSCGM21,
author = {Carlile Lavor and
Michael Souza and
Luiz Mariano Carvalho and
Douglas Soares Gon{\c{c}}alves and
Antonio Mucherino},
title = {Improving the sampling process in the interval Branch-and-Prune algorithm
for the discretizable molecular distance geometry problem},
journal = {Appl. Math. Comput.},
volume = {389},
pages = {125586},
year = {2021},
url = {https://doi.org/10.1016/j.amc.2020.125586},
doi = {10.1016/J.AMC.2020.125586},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/amc/LavorSCGM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cam/LavorORS21,
author = {Carlile Lavor and
Andr{\^{e}}s Oliveira and
Wagner Rocha and
Michael Souza},
title = {On the optimality of finding {DMDGP} symmetries},
journal = {Comput. Appl. Math.},
volume = {40},
number = {3},
year = {2021},
url = {https://doi.org/10.1007/s40314-021-01479-6},
doi = {10.1007/S40314-021-01479-6},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cam/LavorORS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cvgip/LavorSA21,
author = {Carlile Lavor and
Michael Souza and
Jos{\'{e}} Luis Arag{\'{o}}n},
title = {Orthogonality of isometries in the conformal model of the 3D space},
journal = {Graph. Model.},
volume = {114},
pages = {101100},
year = {2021},
url = {https://doi.org/10.1016/j.gmod.2021.101100},
doi = {10.1016/J.GMOD.2021.101100},
timestamp = {Fri, 23 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cvgip/LavorSA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/NetoLL21,
author = {Luiz Ledu{\'{\i}}no de Salles Neto and
Carlile Lavor and
Weldon A. Lodwick},
title = {A note on the Cayley-Menger determinant and the Molecular Distance
Geometry Problem},
journal = {Inf. Sci.},
volume = {559},
pages = {1--7},
year = {2021},
url = {https://doi.org/10.1016/j.ins.2020.12.072},
doi = {10.1016/J.INS.2020.12.072},
timestamp = {Thu, 08 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isci/NetoLL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/rairo/DuxburyLN21,
author = {Phillip M. Duxbury and
Carlile Lavor and
Luiz Ledu{\'{\i}}no de Salles Neto},
title = {A conjecture on a continuous optimization model for the Golomb Ruler
Problem},
journal = {{RAIRO} Oper. Res.},
volume = {55},
number = {4},
pages = {2241--2246},
year = {2021},
url = {https://doi.org/10.1051/ro/2021103},
doi = {10.1051/RO/2021103},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/rairo/DuxburyLN21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gsi/RochaLLM21,
author = {Wagner Rocha and
Carlile Lavor and
Leo Liberti and
Th{\'{e}}r{\`{e}}se E. Malliavin},
editor = {Frank Nielsen and
Fr{\'{e}}d{\'{e}}ric Barbaresco},
title = {Pseudo-dihedral Angles in Proteins Providing a New Description of
the Ramachandran Map},
booktitle = {Geometric Science of Information - 6th International Conference, {GSI}
2023, St. Malo, France, August 30 - September 1, 2023, Proceedings,
Part {II}},
series = {Lecture Notes in Computer Science},
volume = {14072},
pages = {511--519},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-031-38299-4\_53},
doi = {10.1007/978-3-031-38299-4\_53},
timestamp = {Thu, 31 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/gsi/RochaLLM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2110-01231,
author = {Germano Abud and
Jorge Alencar and
Carlile Lavor and
Leo Liberti and
Antonio Mucherino},
title = {An impossible utopia in distance geometry},
journal = {CoRR},
volume = {abs/2110.01231},
year = {2021},
url = {https://arxiv.org/abs/2110.01231},
eprinttype = {arXiv},
eprint = {2110.01231},
timestamp = {Fri, 08 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2110-01231.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ol/MucherinoL20,
author = {Antonio Mucherino and
Carlile Lavor},
title = {Preface: Special issue on distances in optimization and graphs dedicated
to the memory of Michel Deza},
journal = {Optim. Lett.},
volume = {14},
number = {2},
pages = {269--271},
year = {2020},
url = {https://doi.org/10.1007/s11590-019-01466-1},
doi = {10.1007/S11590-019-01466-1},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ol/MucherinoL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ol/AbudALLM20,
author = {Germano Abud and
Jorge Alencar and
Carlile Lavor and
Leo Liberti and
Antonio Mucherino},
title = {The K-discretization and K-incident graphs for discretizable Distance
Geometry},
journal = {Optim. Lett.},
volume = {14},
number = {2},
pages = {469--482},
year = {2020},
url = {https://doi.org/10.1007/s11590-018-1294-2},
doi = {10.1007/S11590-018-1294-2},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ol/AbudALLM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ol/NetoLL20,
author = {Luiz Ledu{\'{\i}}no de Salles Neto and
Carlile Lavor and
Weldon A. Lodwick},
title = {A constrained interval approach to the generalized distance geometry
problem},
journal = {Optim. Lett.},
volume = {14},
number = {2},
pages = {483--492},
year = {2020},
url = {https://doi.org/10.1007/s11590-018-1301-7},
doi = {10.1007/S11590-018-1301-7},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ol/NetoLL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cgi/HildenbrandSAHL20,
author = {Dietmar Hildenbrand and
Christian Steinmetz and
Rafael Alves and
Jaroslav Hrdina and
Carlile Lavor},
editor = {Nadia Magnenat{-}Thalmann and
Constantine Stephanidis and
Enhua Wu and
Daniel Thalmann and
Bin Sheng and
Jinman Kim and
George Papagiannakis and
Marina L. Gavrilova},
title = {An Online Calculator for Qubits Based on Geometric Algebra},
booktitle = {Advances in Computer Graphics - 37th Computer Graphics International
Conference, {CGI} 2020, Geneva, Switzerland, October 20-23, 2020,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12221},
pages = {526--537},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-61864-3\_45},
doi = {10.1007/978-3-030-61864-3\_45},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cgi/HildenbrandSAHL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fedcsis/MucherinoGLLLM20,
author = {Antonio Mucherino and
Douglas Soares Gon{\c{c}}alves and
Leo Liberti and
Jung{-}Hsin Lin and
Carlile Lavor and
Nelson Maculan},
editor = {Maria Ganzha and
Leszek A. Maciaszek and
Marcin Paprzycki},
title = {MD-jeep: a New Release for Discretizable Distance Geometry Problems
with Interval Data},
booktitle = {Proceedings of the 2020 Federated Conference on Computer Science and
Information Systems, FedCSIS 2020, Sofia, Bulgaria, September 6-9,
2020},
series = {Annals of Computer Science and Information Systems},
volume = {21},
pages = {289--294},
year = {2020},
url = {https://doi.org/10.15439/2020F35},
doi = {10.15439/2020F35},
timestamp = {Tue, 17 May 2022 16:11:27 +0200},
biburl = {https://dblp.org/rec/conf/fedcsis/MucherinoGLLLM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2006-11523,
author = {Leo Liberti and
Gabriele Iommazzo and
Carlile Lavor and
Nelson Maculan},
title = {Cycle-based formulations in Distance Geometry},
journal = {CoRR},
volume = {abs/2006.11523},
year = {2020},
url = {https://arxiv.org/abs/2006.11523},
eprinttype = {arXiv},
eprint = {2006.11523},
timestamp = {Wed, 24 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2006-11523.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2009-05404,
author = {Douglas Soares Gon{\c{c}}alves and
Carlile Lavor and
Leo Liberti and
Michael Souza},
title = {A new algorithm for the \({}^{\mbox{K}}\)DMDGP subclass of Distance
Geometry Problems},
journal = {CoRR},
volume = {abs/2009.05404},
year = {2020},
url = {https://arxiv.org/abs/2009.05404},
eprinttype = {arXiv},
eprint = {2009.05404},
timestamp = {Fri, 18 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2009-05404.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:series/sbcs/MarquezinoPL19,
author = {Franklin de Lima Marquezino and
Renato Portugal and
Carlile Lavor},
title = {A Primer on Quantum Computing},
series = {Springer Briefs in Computer Science},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-19066-8},
doi = {10.1007/978-3-030-19066-8},
isbn = {978-3-030-19065-1},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/series/sbcs/MarquezinoPL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/AlencarLL19,
author = {Jorge Alencar and
Carlile Lavor and
Leo Liberti},
title = {Realizing Euclidean distance matrices by sphere intersection},
journal = {Discret. Appl. Math.},
volume = {256},
pages = {5--10},
year = {2019},
url = {https://doi.org/10.1016/j.dam.2018.06.003},
doi = {10.1016/J.DAM.2018.06.003},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/AlencarLL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/LavorLDWBMN19,
author = {Carlile Lavor and
Leo Liberti and
Bruce Randall Donald and
Bradley Worley and
Benjamin Bardiaux and
Th{\'{e}}r{\`{e}}se E. Malliavin and
Michael Nilges},
title = {Minimal {NMR} distance information for rigidity of protein graphs},
journal = {Discret. Appl. Math.},
volume = {256},
pages = {91--104},
year = {2019},
url = {https://doi.org/10.1016/j.dam.2018.03.071},
doi = {10.1016/J.DAM.2018.03.071},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/LavorLDWBMN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/LavorSCL19,
author = {Carlile Lavor and
Michael Souza and
Luiz Mariano Carvalho and
Leo Liberti},
title = {On the polynomiality of finding {KDMDGP} re-orders},
journal = {Discret. Appl. Math.},
volume = {267},
pages = {190--194},
year = {2019},
url = {https://doi.org/10.1016/j.dam.2019.07.021},
doi = {10.1016/J.DAM.2019.07.021},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/LavorSCL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MalliavinMLL19,
author = {Th{\'{e}}r{\`{e}}se E. Malliavin and
Antonio Mucherino and
Carlile Lavor and
Leo Liberti},
title = {Systematic Exploration of Protein Conformational Space Using a Distance
Geometry Approach},
journal = {J. Chem. Inf. Model.},
volume = {59},
number = {10},
pages = {4486--4503},
year = {2019},
url = {https://doi.org/10.1021/acs.jcim.9b00215},
doi = {10.1021/ACS.JCIM.9B00215},
timestamp = {Wed, 01 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/MalliavinMLL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ol/LibertiLM19,
author = {Leo Liberti and
Carlile Lavor and
Nelson Maculan},
title = {A mathematical programming formulation for the Hartree-Fock problem
on open-shell systems},
journal = {Optim. Lett.},
volume = {13},
number = {2},
pages = {429--437},
year = {2019},
url = {https://doi.org/10.1007/s11590-019-01386-0},
doi = {10.1007/S11590-019-01386-0},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ol/LibertiLM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/anor/BillingeDGLM18,
author = {Simon J. L. Billinge and
Phillip M. Duxbury and
Douglas Soares Gon{\c{c}}alves and
Carlile Lavor and
Antonio Mucherino},
title = {Recent results on assigned and unassigned distance geometry with applications
to protein molecules and nanostructures},
journal = {Ann. Oper. Res.},
volume = {271},
number = {1},
pages = {161--203},
year = {2018},
url = {https://doi.org/10.1007/s10479-018-2989-6},
doi = {10.1007/S10479-018-2989-6},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/anor/BillingeDGLM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/FidalgoGLLM18,
author = {Felipe Fidalgo and
Douglas Soares Gon{\c{c}}alves and
Carlile Lavor and
Leo Liberti and
Antonio Mucherino},
title = {A symmetry-based splitting strategy for discretizable distance geometry
problems},
journal = {J. Glob. Optim.},
volume = {71},
number = {4},
pages = {717--733},
year = {2018},
url = {https://doi.org/10.1007/s10898-018-0610-9},
doi = {10.1007/S10898-018-0610-9},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/FidalgoGLLM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/SantiagoLMK18,
author = {Cl{\'{a}}udio P. Santiago and
Carlile Lavor and
S{\'{e}}rgio Assun{\c{c}}{\~{a}}o Monteiro and
Alberto Krone{-}Martins},
title = {A new algorithm for the small-field astrometric point-pattern matching
problem},
journal = {J. Glob. Optim.},
volume = {72},
number = {1},
pages = {55--70},
year = {2018},
url = {https://doi.org/10.1007/s10898-018-0653-y},
doi = {10.1007/S10898-018-0653-Y},
timestamp = {Tue, 20 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/SantiagoLMK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/WorleyDCMBWNLL18,
author = {Bradley Worley and
Florent Delhommel and
Florence Cordier and
Th{\'{e}}r{\`{e}}se E. Malliavin and
Benjamin Bardiaux and
Nicolas Wolff and
Michael Nilges and
Carlile Lavor and
Leo Liberti},
title = {Tuning interval Branch-and-Prune for protein structure determination},
journal = {J. Glob. Optim.},
volume = {72},
number = {1},
pages = {109--127},
year = {2018},
url = {https://doi.org/10.1007/s10898-018-0635-0},
doi = {10.1007/S10898-018-0635-0},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jgo/WorleyDCMBWNLL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:books/daglib/0043754,
author = {Leo Liberti and
Carlile Lavor},
title = {Euclidean Distance Geometry - an Introduction},
series = {Springer undergraduate texts in mathematics and technology},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-60792-4},
doi = {10.1007/978-3-319-60792-4},
isbn = {978-3-319-60791-7},
timestamp = {Fri, 28 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/daglib/0043754.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:series/sbcs/LavorLLC17,
author = {Carlile Lavor and
Leo Liberti and
Weldon A. Lodwick and
Tiago Mendon{\c{c}}a da Costa},
title = {An Introduction to Distance Geometry applied to Molecular Geometry},
series = {Springer Briefs in Computer Science},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-57183-6},
doi = {10.1007/978-3-319-57183-6},
isbn = {978-3-319-57182-9},
timestamp = {Mon, 06 Nov 2017 00:00:00 +0100},
biburl = {https://dblp.org/rec/series/sbcs/LavorLLC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dcg/DAmbrosioVLLM17,
author = {Claudia D'Ambrosio and
Ky Khac Vu and
Carlile Lavor and
Leo Liberti and
Nelson Maculan},
title = {New Error Measures and Methods for Realizing Protein Graphs from Distance
Data},
journal = {Discret. Comput. Geom.},
volume = {57},
number = {2},
pages = {371--418},
year = {2017},
url = {https://doi.org/10.1007/s00454-016-9846-7},
doi = {10.1007/S00454-016-9846-7},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dcg/DAmbrosioVLLM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/CostaBLL17,
author = {Tiago Mendon{\c{c}}a da Costa and
H. Bouwmeester and
Weldon A. Lodwick and
Carlile Lavor},
title = {Calculating the possible conformations arising from uncertainty in
the molecular distance geometry problem using constraint interval
analysis},
journal = {Inf. Sci.},
volume = {415},
pages = {41--52},
year = {2017},
url = {https://doi.org/10.1016/j.ins.2017.06.015},
doi = {10.1016/J.INS.2017.06.015},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isci/CostaBLL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/itor/AgraFLMPR17,
author = {Agostinho Agra and
Rosa Figueiredo and
Carlile Lavor and
Nelson Maculan and
Ant{\'{o}}nio Pereira and
Cristina Requejo},
title = {Feasibility check for the distance geometry problem: an application
to molecular conformations},
journal = {Int. Trans. Oper. Res.},
volume = {24},
number = {5},
pages = {1023--1040},
year = {2017},
url = {https://doi.org/10.1111/itor.12283},
doi = {10.1111/ITOR.12283},
timestamp = {Wed, 21 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/itor/AgraFLMPR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/GoncalvesMLL17,
author = {Douglas Soares Gon{\c{c}}alves and
Antonio Mucherino and
Carlile Lavor and
Leo Liberti},
title = {Recent advances on the interval distance geometry problem},
journal = {J. Glob. Optim.},
volume = {69},
number = {3},
pages = {525--545},
year = {2017},
url = {https://doi.org/10.1007/s10898-016-0493-6},
doi = {10.1007/S10898-016-0493-6},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/GoncalvesMLL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SouzaLA17,
author = {Michael Souza and
Carlile Lavor and
Rafael Alves},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Modeling the Molecular Distance Geometry Problem Using Dihedral Angles},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {270--278},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_24},
doi = {10.1007/978-3-319-59575-7\_24},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SouzaLA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/4or/BillingeDGLM16,
author = {Simon J. L. Billinge and
Phillip M. Duxbury and
Douglas Soares Gon{\c{c}}alves and
Carlile Lavor and
Antonio Mucherino},
title = {Assigned and unassigned distance geometry: applications to biological
molecules and nanostructures},
journal = {4OR},
volume = {14},
number = {4},
pages = {337--376},
year = {2016},
url = {https://doi.org/10.1007/s10288-016-0314-2},
doi = {10.1007/S10288-016-0314-2},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/4or/BillingeDGLM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/endm/AmaroLOLA16,
author = {Bruno D. Amaro and
Leonardo Silva de Lima and
Carla Silva Oliveira and
Carlile Lavor and
Nair Abreu},
title = {A note on the sum of the largest signless Laplacian eigenvalues},
journal = {Electron. Notes Discret. Math.},
volume = {54},
pages = {175--180},
year = {2016},
url = {https://doi.org/10.1016/j.endm.2016.09.031},
doi = {10.1016/J.ENDM.2016.09.031},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/endm/AmaroLOLA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/itor/LavorFML16,
author = {Carlile Lavor and
Marcelo Firer and
Jos{\'{e}} Mario Mart{\'{\i}}nez and
Leo Liberti},
title = {Preface to the Special Issue on Many Faces of Distances},
journal = {Int. Trans. Oper. Res.},
volume = {23},
number = {5},
pages = {841},
year = {2016},
url = {https://doi.org/10.1111/itor.12303},
doi = {10.1111/ITOR.12303},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/itor/LavorFML16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/itor/LibertiL16,
author = {Leo Liberti and
Carlile Lavor},
title = {Six mathematical gems from the history of distance geometry},
journal = {Int. Trans. Oper. Res.},
volume = {23},
number = {5},
pages = {897--920},
year = {2016},
url = {https://doi.org/10.1111/itor.12170},
doi = {10.1111/ITOR.12170},
timestamp = {Thu, 09 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/itor/LibertiL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/oms/GoncalvesGL16,
author = {Douglas Soares Gon{\c{c}}alves and
M{\'{a}}rcia A. Gomes{-}Ruggiero and
Carlile Lavor},
title = {A projected gradient method for optimization over density matrices},
journal = {Optim. Methods Softw.},
volume = {31},
number = {2},
pages = {328--341},
year = {2016},
url = {https://doi.org/10.1080/10556788.2015.1082105},
doi = {10.1080/10556788.2015.1082105},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/oms/GoncalvesGL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cgi/AlvesSL16,
author = {Rafael Alves and
Cipriano de Souza and
Carlile Lavor},
editor = {George Papagiannakis and
Daniel Thalmann and
Panos E. Trahanias},
title = {Advances on the Geometric Algebra approach to the Discretizable Molecular
Distance Geometry Problem {(DMDGP)}},
booktitle = {Short Paper Proceedings of the 33rd Computer Graphics International,
Heraklion, Greece, June 28 - July 1, 2016},
pages = {85--88},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2949035.2949057},
doi = {10.1145/2949035.2949057},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cgi/AlvesSL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fedcsis/MucherinoGLL16,
author = {Antonio Mucherino and
Warley Gramacho and
Jung{-}Hsin Lin and
Carlile Lavor},
editor = {Maria Ganzha and
Leszek A. Maciaszek and
Marcin Paprzycki},
title = {A New Approach to the Discretization of Multidimensional Scaling},
booktitle = {Proceedings of the 2016 Federated Conference on Computer Science and
Information Systems, FedCSIS 2016, Gda{\'{n}}sk, Poland, September
11-14, 2016},
series = {Annals of Computer Science and Information Systems},
volume = {8},
pages = {591--599},
publisher = {{IEEE}},
year = {2016},
url = {https://doi.org/10.15439/2016F213},
doi = {10.15439/2016F213},
timestamp = {Tue, 23 Apr 2024 09:56:26 +0200},
biburl = {https://dblp.org/rec/conf/fedcsis/MucherinoGLL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/DAmbrosioVLLM16,
author = {Claudia D'Ambrosio and
Ky Khac Vu and
Carlile Lavor and
Leo Liberti and
Nelson Maculan},
title = {New error measures and methods for realizing protein graphs from distance
data},
journal = {CoRR},
volume = {abs/1607.00868},
year = {2016},
url = {http://arxiv.org/abs/1607.00868},
eprinttype = {arXiv},
eprint = {1607.00868},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/DAmbrosioVLLM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/LibertiL16,
author = {Leo Liberti and
Carlile Lavor},
title = {Open research areas in distance geometry},
journal = {CoRR},
volume = {abs/1610.00652},
year = {2016},
url = {http://arxiv.org/abs/1610.00652},
eprinttype = {arXiv},
eprint = {1610.00652},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/LibertiL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CassioliBBMALNL15,
author = {Andrea Cassioli and
Benjamin Bardiaux and
Guillaume Bouvier and
Antonio Mucherino and
Rafael Alves and
Leo Liberti and
Michael Nilges and
Carlile Lavor and
Th{\'{e}}r{\`{e}}se E. Malliavin},
title = {An algorithm to enumerate all possible protein conformations verifying
a set of distance constraints},
journal = {{BMC} Bioinform.},
volume = {16},
pages = {23:1--23:15},
year = {2015},
url = {https://doi.org/10.1186/s12859-015-0451-1},
doi = {10.1186/S12859-015-0451-1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CassioliBBMALNL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/MucherinoRL15,
author = {Antonio Mucherino and
Rosiane de Freitas Rodrigues and
Carlile Lavor},
title = {Preface},
journal = {Discret. Appl. Math.},
volume = {197},
pages = {1--2},
year = {2015},
url = {https://doi.org/10.1016/j.dam.2015.08.012},
doi = {10.1016/J.DAM.2015.08.012},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/MucherinoRL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/CassioliGLL15,
author = {Andrea Cassioli and
Oktay G{\"{u}}nl{\"{u}}k and
Carlile Lavor and
Leo Liberti},
title = {Discretization vertex orders in distance geometry},
journal = {Discret. Appl. Math.},
volume = {197},
pages = {27--41},
year = {2015},
url = {https://doi.org/10.1016/j.dam.2014.08.035},
doi = {10.1016/J.DAM.2014.08.035},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/CassioliGLL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/endm/AlencarBLL15,
author = {Jorge Alencar and
Tib{\'{e}}rius O. Bonates and
Carlile Lavor and
Leo Liberti},
title = {An algorithm for realizing Euclidean distance matrices},
journal = {Electron. Notes Discret. Math.},
volume = {50},
pages = {397--402},
year = {2015},
url = {https://doi.org/10.1016/j.endm.2015.07.066},
doi = {10.1016/J.ENDM.2015.07.066},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/endm/AlencarBLL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jcdcg/LibertiSL15,
author = {Leo Liberti and
Grzegorz Swirszcz and
Carlile Lavor},
editor = {Jin Akiyama and
Hiro Ito and
Toshinori Sakai and
Yushi Uno},
title = {Distance Geometry on the Sphere},
booktitle = {Discrete and Computational Geometry and Graphs - 18th Japan Conference,
{JCDCGG} 2015, Kyoto, Japan, September 14-16, 2015, Revised Selected
Papers},
series = {Lecture Notes in Computer Science},
volume = {9943},
pages = {204--215},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-48532-4\_18},
doi = {10.1007/978-3-319-48532-4\_18},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/jcdcg/LibertiSL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/LibertiMLLM14,
author = {Leo Liberti and
Beno{\^{\i}}t Masson and
Jon Lee and
Carlile Lavor and
Antonio Mucherino},
title = {On the number of realizations of certain Henneberg graphs arising
in protein conformation},
journal = {Discret. Appl. Math.},
volume = {165},
pages = {213--232},
year = {2014},
url = {https://doi.org/10.1016/j.dam.2013.01.020},
doi = {10.1016/J.DAM.2013.01.020},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/LibertiMLLM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/LaraPL14,
author = {Pedro C. S. Lara and
Renato Portugal and
Carlile Lavor},
title = {A new hybrid classical-quantum algorithm for continuous global optimization
problems},
journal = {J. Glob. Optim.},
volume = {60},
number = {2},
pages = {317--331},
year = {2014},
url = {https://doi.org/10.1007/s10898-013-0112-8},
doi = {10.1007/S10898-013-0112-8},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/LaraPL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/CostaMLCCM14,
author = {Virginia Costa and
Antonio Mucherino and
Carlile Lavor and
Andrea Cassioli and
Luiz Mariano Carvalho and
Nelson Maculan},
title = {Discretization orders for protein side chains},
journal = {J. Glob. Optim.},
volume = {60},
number = {2},
pages = {333--349},
year = {2014},
url = {https://doi.org/10.1007/s10898-013-0135-1},
doi = {10.1007/S10898-013-0135-1},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/CostaMLCCM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/qic/GoncalvesGL14,
author = {Douglas Soares Gon{\c{c}}alves and
M{\'{a}}rcia A. Gomes{-}Ruggiero and
Carlile Lavor},
title = {Global convergence of diluted iterations in maximum-likelihood quantum
tomography},
journal = {Quantum Inf. Comput.},
volume = {14},
number = {11-12},
pages = {966--980},
year = {2014},
url = {https://doi.org/10.26421/QIC14.11-12-5},
doi = {10.26421/QIC14.11-12-5},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/qic/GoncalvesGL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamrev/LibertiLMM14,
author = {Leo Liberti and
Carlile Lavor and
Nelson Maculan and
Antonio Mucherino},
title = {Euclidean Distance Geometry and Applications},
journal = {{SIAM} Rev.},
volume = {56},
number = {1},
pages = {3--69},
year = {2014},
url = {https://doi.org/10.1137/120875909},
doi = {10.1137/120875909},
timestamp = {Tue, 29 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamrev/LibertiLMM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcos/SeoKRLMK14,
author = {Jeongyeon Seo and
Jae{-}Kwan Kim and
Joonghyun Ryu and
Carlile Lavor and
Antonio Mucherino and
Deok{-}Soo Kim},
title = {BetaMDGP: Protein Structure Determination Algorithm Based on the Beta-complex},
journal = {Trans. Comput. Sci.},
volume = {22},
pages = {130--155},
year = {2014},
url = {https://doi.org/10.1007/978-3-642-54212-1\_7},
doi = {10.1007/978-3-642-54212-1\_7},
timestamp = {Mon, 28 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcos/SeoKRLMK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bigdata/AlencarBL14,
author = {Jorge Alencar and
Tib{\'{e}}rius O. Bonates and
Carlile Lavor},
title = {A Combinatorial Approach to Multidimensional Scaling},
booktitle = {2014 {IEEE} International Congress on Big Data, Anchorage, AK, USA,
June 27 - July 2, 2014},
pages = {562--569},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/BigData.Congress.2014.87},
doi = {10.1109/BIGDATA.CONGRESS.2014.87},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bigdata/AlencarBL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fedcsis/GoncalvesML14,
author = {Douglas Soares Gon{\c{c}}alves and
Antonio Mucherino and
Carlile Lavor},
editor = {Maria Ganzha and
Leszek A. Maciaszek and
Marcin Paprzycki},
title = {An adaptive branching scheme for the Branch {\&} Prune algorithm
applied to Distance Geometry},
booktitle = {Proceedings of the 2014 Federated Conference on Computer Science and
Information Systems, Warsaw, Poland, September 7-10, 2014},
series = {Annals of Computer Science and Information Systems},
volume = {2},
pages = {457--463},
year = {2014},
url = {https://doi.org/10.15439/2014F92},
doi = {10.15439/2014F92},
timestamp = {Tue, 23 Apr 2024 09:55:03 +0200},
biburl = {https://dblp.org/rec/conf/fedcsis/GoncalvesML14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SouzaLMM13,
author = {Michael Souza and
Carlile Lavor and
Albert Muritiba and
Nelson Maculan},
title = {Solving the molecular distance geometry problem with inaccurate distance
data},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-9}},
pages = {S7},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S9-S7},
doi = {10.1186/1471-2105-14-S9-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SouzaLMM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbra/SallaumeMOSLL13,
author = {Silas Sallaume and
Simone de Lima Martins and
Luiz Satoru Ochi and
Warley Gramacho Da Silva and
Carlile Lavor and
Leo Liberti},
title = {A discrete search algorithm for finding the structure of protein backbones
and side chains},
journal = {Int. J. Bioinform. Res. Appl.},
volume = {9},
number = {3},
pages = {261--270},
year = {2013},
url = {https://doi.org/10.1504/IJBRA.2013.053606},
doi = {10.1504/IJBRA.2013.053606},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijbra/SallaumeMOSLL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/LavorLM13,
author = {Carlile Lavor and
Leo Liberti and
Antonio Mucherino},
title = {The interval Branch-and-Prune algorithm for the discretizable molecular
distance geometry problem with inexact distances},
journal = {J. Glob. Optim.},
volume = {56},
number = {3},
pages = {855--871},
year = {2013},
url = {https://doi.org/10.1007/s10898-011-9799-6},
doi = {10.1007/S10898-011-9799-6},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/LavorLM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fedcsis/GoncalvesML13,
author = {Douglas Soares Gon{\c{c}}alves and
Antonio Mucherino and
Carlile Lavor},
editor = {Maria Ganzha and
Leszek A. Maciaszek and
Marcin Paprzycki},
title = {Energy-based Pruning Devices for the {BP} Algorithm applied to Distance
Geometry},
booktitle = {Proceedings of the 2013 Federated Conference on Computer Science and
Information Systems, Krak{\'{o}}w, Poland, September 8-11, 2013},
pages = {341--346},
year = {2013},
url = {https://ieeexplore.ieee.org/document/6644023/},
timestamp = {Mon, 09 Aug 2021 14:54:05 +0200},
biburl = {https://dblp.org/rec/conf/fedcsis/GoncalvesML13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gsi/LibertiLAA13,
author = {Leo Liberti and
Carlile Lavor and
Jorge Alencar and
Germano Abud},
editor = {Frank Nielsen and
Fr{\'{e}}d{\'{e}}ric Barbaresco},
title = {Counting the Number of Solutions of {KDMDGP} Instances},
booktitle = {Geometric Science of Information - First International Conference,
{GSI} 2013, Paris, France, August 28-30, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8085},
pages = {224--230},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-40020-9\_23},
doi = {10.1007/978-3-642-40020-9\_23},
timestamp = {Wed, 07 Dec 2022 23:13:13 +0100},
biburl = {https://dblp.org/rec/conf/gsi/LibertiLAA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/AlvesCMLL13,
author = {Rafael Alves and
Andrea Cassioli and
Antonio Mucherino and
Carlile Lavor and
Leo Liberti},
editor = {Ignacio Rojas and
Francisco M. Ortu{\~{n}}o Guzman},
title = {The integration of Clifford Algebra in the iBP algorithm for the {DMDGP}},
booktitle = {International Work-Conference on Bioinformatics and Biomedical Engineering,
{IWBBIO} 2013, Granada, Spain, March 18-20, 2013. Proceedings},
pages = {745--746},
publisher = {Copicentro Editorial},
year = {2013},
url = {http://iwbbio.ugr.es/papers/iwbbio\_117.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iwbbio/AlvesCMLL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/13/LibertiLM13,
author = {Leo Liberti and
Carlile Lavor and
Antonio Mucherino},
editor = {Antonio Mucherino and
Carlile Lavor and
Leo Liberti and
Nelson Maculan},
title = {The Discretizable Molecular Distance Geometry Problem seems Easier
on Proteins},
booktitle = {Distance Geometry: Theory, Methods, and Applications},
pages = {47--60},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-1-4614-5128-0\_3},
doi = {10.1007/978-1-4614-5128-0\_3},
timestamp = {Sat, 19 Oct 2019 19:02:56 +0200},
biburl = {https://dblp.org/rec/books/sp/13/LibertiLM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/13/NucciNL13,
author = {Pedro Nucci and
Loana Tito Nogueira and
Carlile Lavor},
editor = {Antonio Mucherino and
Carlile Lavor and
Leo Liberti and
Nelson Maculan},
title = {Solving the Discretizable Molecular Distance Geometry Problem by Multiple
Realization Trees},
booktitle = {Distance Geometry: Theory, Methods, and Applications},
pages = {161--176},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-1-4614-5128-0\_9},
doi = {10.1007/978-1-4614-5128-0\_9},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/13/NucciNL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:books/sp/13/MLLM2013,
editor = {Antonio Mucherino and
Carlile Lavor and
Leo Liberti and
Nelson Maculan},
title = {Distance Geometry: Theory, Methods, and Applications},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-1-4614-5128-0},
doi = {10.1007/978-1-4614-5128-0},
isbn = {978-1-4614-5127-3},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/13/MLLM2013.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/coap/LavorLMM12,
author = {Carlile Lavor and
Leo Liberti and
Nelson Maculan and
Antonio Mucherino},
title = {The discretizable molecular distance geometry problem},
journal = {Comput. Optim. Appl.},
volume = {52},
number = {1},
pages = {115--146},
year = {2012},
url = {https://doi.org/10.1007/s10589-011-9402-6},
doi = {10.1007/S10589-011-9402-6},
timestamp = {Tue, 14 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/coap/LavorLMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eor/LavorLMM12,
author = {Carlile Lavor and
Leo Liberti and
Nelson Maculan and
Antonio Mucherino},
title = {Recent advances on the Discretizable Molecular Distance Geometry Problem},
journal = {Eur. J. Oper. Res.},
volume = {219},
number = {3},
pages = {698--706},
year = {2012},
url = {https://doi.org/10.1016/j.ejor.2011.11.007},
doi = {10.1016/J.EJOR.2011.11.007},
timestamp = {Fri, 21 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/eor/LavorLMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/MucherinoLL12,
author = {Antonio Mucherino and
Carlile Lavor and
Leo Liberti},
title = {Exploiting Symmetry Properties of the Discretizable molecular Distance
Geometry Problem},
journal = {J. Bioinform. Comput. Biol.},
volume = {10},
number = {3},
year = {2012},
url = {https://doi.org/10.1142/S0219720012420097},
doi = {10.1142/S0219720012420097},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/MucherinoLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ol/LavorLJLMS12,
author = {Carlile Lavor and
Jon Lee and
Audrey Lee{-}St. John and
Leo Liberti and
Antonio Mucherino and
Maxim Sviridenko},
title = {Discretization orders for distance geometry problems},
journal = {Optim. Lett.},
volume = {6},
number = {4},
pages = {783--796},
year = {2012},
url = {https://doi.org/10.1007/s11590-011-0302-6},
doi = {10.1007/S11590-011-0302-6},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ol/LavorLJLMS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ol/MucherinoLL12,
author = {Antonio Mucherino and
Carlile Lavor and
Leo Liberti},
title = {The discretizable distance geometry problem},
journal = {Optim. Lett.},
volume = {6},
number = {8},
pages = {1671--1686},
year = {2012},
url = {https://doi.org/10.1007/s11590-011-0358-3},
doi = {10.1007/S11590-011-0358-3},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ol/MucherinoLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/qic/GoncalvesGLFR12,
author = {Douglas Soares Gon{\c{c}}alves and
M{\'{a}}rcia A. Gomes{-}Ruggiero and
Carlile Lavor and
Osvaldo Jim{\'{e}}nez Farias and
P. H. Souto Ribeiro},
title = {Local solutions of maximum likelihood estimation in quantum state
tomography},
journal = {Quantum Inf. Comput.},
volume = {12},
number = {9-10},
pages = {775--790},
year = {2012},
url = {https://doi.org/10.26421/QIC12.9-10-4},
doi = {10.26421/QIC12.9-10-4},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/qic/GoncalvesGLFR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fedcsis/CostaMLCM12,
author = {Virginia Costa and
Antonio Mucherino and
Carlile Lavor and
Luiz Mariano Carvalho and
Nelson Maculan},
editor = {Maria Ganzha and
Leszek A. Maciaszek and
Marcin Paprzycki},
title = {On suitable orders for discretizing Molecular Distance Geometry Problems
related to protein side chains},
booktitle = {Federated Conference on Computer Science and Information Systems -
FedCSIS 2012, Wroclaw, Poland, 9-12 September 2012, Proceedings},
pages = {379--384},
year = {2012},
url = {https://fedcsis.org/proceedings/2012/pliks/174.pdf},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fedcsis/CostaMLCM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/GramachoMLM12,
author = {Warley Gramacho and
Antonio Mucherino and
Carlile Lavor and
Nelson Maculan},
title = {A Parallel {BP} Algorithm for the Discretizable Distance Geometry
Problem},
booktitle = {26th {IEEE} International Parallel and Distributed Processing Symposium
Workshops {\&} PhD Forum, {IPDPS} 2012, Shanghai, China, May 21-25,
2012},
pages = {1762--1768},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/IPDPSW.2012.218},
doi = {10.1109/IPDPSW.2012.218},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/GramachoMLM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/itor/LibertiLMM11,
author = {Leo Liberti and
Carlile Lavor and
Antonio Mucherino and
Nelson Maculan},
title = {Molecular distance geometry methods: from continuous to discrete},
journal = {Int. Trans. Oper. Res.},
volume = {18},
number = {1},
pages = {33--51},
year = {2011},
url = {https://doi.org/10.1111/j.1475-3995.2009.00757.x},
doi = {10.1111/J.1475-3995.2009.00757.X},
timestamp = {Thu, 09 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/itor/LibertiLMM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/itor/LavorLM11,
author = {Carlile Lavor and
Leo Liberti and
Nelson Maculan},
title = {A note on "A branch-and-prune algorithm for the molecular distance
geometry problem"},
journal = {Int. Trans. Oper. Res.},
volume = {18},
number = {6},
pages = {751--752},
year = {2011},
url = {https://doi.org/10.1111/j.1475-3995.2011.00807.x},
doi = {10.1111/J.1475-3995.2011.00807.X},
timestamp = {Thu, 09 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/itor/LavorLM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/LavorMLM11,
author = {Carlile Lavor and
Antonio Mucherino and
Leo Liberti and
Nelson Maculan},
title = {On the computation of protein backbones by using artificial backbones
of hydrogens},
journal = {J. Glob. Optim.},
volume = {50},
number = {2},
pages = {329--344},
year = {2011},
url = {https://doi.org/10.1007/s10898-010-9584-y},
doi = {10.1007/S10898-010-9584-Y},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/LavorMLM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/orl/SouzaXLM11,
author = {Michael Souza and
Adilson Elias Xavier and
Carlile Lavor and
Nelson Maculan},
title = {Hyperbolic smoothing and penalty techniques applied to molecular structure
determination},
journal = {Oper. Res. Lett.},
volume = {39},
number = {6},
pages = {461--465},
year = {2011},
url = {https://doi.org/10.1016/j.orl.2011.07.007},
doi = {10.1016/J.ORL.2011.07.007},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/orl/SouzaXLM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/MucherinoLL11,
author = {Antonio Mucherino and
Carlile Lavor and
Leo Liberti},
title = {A symmetry-driven {BP} algorithm for the Discretizable Molecular Distance
Geometry Problem},
booktitle = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
pages = {390--395},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/BIBMW.2011.6112403},
doi = {10.1109/BIBMW.2011.6112403},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/MucherinoLL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoa/LibertiMLLM11,
author = {Leo Liberti and
Beno{\^{\i}}t Masson and
Jon Lee and
Carlile Lavor and
Antonio Mucherino},
editor = {Weifan Wang and
Xuding Zhu and
Ding{-}Zhu Du},
title = {On the Number of Solutions of the Discretizable Molecular Distance
Geometry Problem},
booktitle = {Combinatorial Optimization and Applications - 5th International Conference,
{COCOA} 2011, Zhangjiajie, China, August 4-6, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6831},
pages = {322--342},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-22616-8\_26},
doi = {10.1007/978-3-642-22616-8\_26},
timestamp = {Tue, 28 Apr 2020 17:58:14 +0200},
biburl = {https://dblp.org/rec/conf/cocoa/LibertiMLLM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/colognetwente/LibertiMLM11,
author = {Leo Liberti and
Beno{\^{\i}}t Masson and
Carlile Lavor and
Antonio Mucherino},
editor = {Ludovica Adacher and
Marta Flamini and
Gianmaria Leo and
Gaia Nicosia and
Andrea Pacifici and
Veronica Piccialli},
title = {Branch-and-Prune trees with bounded width},
booktitle = {Proceedings of the 10th Cologne-Twente Workshop on graphs and combinatorial
optimization. Extended Abstracts, Villa Mondragone, Frascati, Italy,
June 14-16, 2011},
pages = {189--193},
year = {2011},
url = {http://ctw2011.dia.uniroma3.it/ctw\_proceedings.pdf\#page=201},
timestamp = {Thu, 12 Mar 2020 11:34:41 +0100},
biburl = {https://dblp.org/rec/conf/colognetwente/LibertiMLM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wea/MucherinoLMLNM11,
author = {Antonio Mucherino and
Carlile Lavor and
Therese E. Malliavin and
Leo Liberti and
Michael Nilges and
Nelson Maculan},
editor = {Panos M. Pardalos and
Steffen Rebennack},
title = {Influence of Pruning Devices on the Solution of Molecular Distance
Geometry Problems},
booktitle = {Experimental Algorithms - 10th International Symposium, {SEA} 2011,
Kolimpari, Chania, Crete, Greece, May 5-7, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6630},
pages = {206--217},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-20662-7\_18},
doi = {10.1007/978-3-642-20662-7\_18},
timestamp = {Mon, 05 Feb 2024 20:31:36 +0100},
biburl = {https://dblp.org/rec/conf/wea/MucherinoLMLNM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1103-1264,
author = {Leo Liberti and
Carlile Lavor and
Beno{\^{\i}}t Masson and
Antonio Mucherino},
title = {Polynomial cases of the Discretizable Molecular Distance Geometry
Problem},
journal = {CoRR},
volume = {abs/1103.1264},
year = {2011},
url = {http://arxiv.org/abs/1103.1264},
eprinttype = {arXiv},
eprint = {1103.1264},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1103-1264.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aiccsa/MucherinoLLT10,
author = {Antonio Mucherino and
Carlile Lavor and
Leo Liberti and
El{-}Ghazali Talbi},
title = {A parallel version of the Branch {\&} Prune algorithm for the
Molecular Distance Geometry Problem},
booktitle = {The 8th {ACS/IEEE} International Conference on Computer Systems and
Applications, {AICCSA} 2010, Hammamet, Tunisia, May 16-19, 2010},
pages = {1--6},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/AICCSA.2010.5586983},
doi = {10.1109/AICCSA.2010.5586983},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aiccsa/MucherinoLLT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LavorLM10,
author = {Carlile Lavor and
Leo Liberti and
Antonio Mucherino},
title = {On the solution of molecular distance geometry problems with interval
data},
booktitle = {2010 {IEEE} International Conference on Bioinformatics and Biomedicine
Workshops, {BIBMW} 2010, Hong Kong, December 18, 2010},
pages = {77--82},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/BIBMW.2010.5703777},
doi = {10.1109/BIBMW.2010.5703777},
timestamp = {Wed, 16 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/LavorLM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icms/MucherinoLL10,
author = {Antonio Mucherino and
Leo Liberti and
Carlile Lavor},
editor = {Komei Fukuda and
Joris van der Hoeven and
Michael Joswig and
Nobuki Takayama},
title = {MD-jeep: An Implementation of a Branch and Prune Algorithm for Distance
Geometry Problems},
booktitle = {Mathematical Software - {ICMS} 2010, Third International Congress
on Mathematical Software, Kobe, Japan, September 13-17, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6327},
pages = {186--197},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-15582-6\_34},
doi = {10.1007/978-3-642-15582-6\_34},
timestamp = {Mon, 28 Aug 2023 21:17:32 +0200},
biburl = {https://dblp.org/rec/conf/icms/MucherinoLL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1010-1834,
author = {Leo Liberti and
Beno{\^{\i}}t Masson and
Jon Lee and
Carlile Lavor and
Antonio Mucherino},
title = {On the number of solutions of the discretizable molecular distance
geometry problem},
journal = {CoRR},
volume = {abs/1010.1834},
year = {2010},
url = {http://arxiv.org/abs/1010.1834},
eprinttype = {arXiv},
eprint = {1010.1834},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1010-1834.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/LibertiLMN09,
author = {Leo Liberti and
Carlile Lavor and
Nelson Maculan and
Marco Antonio Chaer Nascimento},
title = {Reformulation in mathematical programming: An application to quantum
chemistry},
journal = {Discret. Appl. Math.},
volume = {157},
number = {6},
pages = {1309--1318},
year = {2009},
url = {https://doi.org/10.1016/j.dam.2007.08.044},
doi = {10.1016/J.DAM.2007.08.044},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/LibertiLMN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/LibertiLMM09,
author = {Leo Liberti and
Carlile Lavor and
Nelson Maculan and
Fabrizio Marinelli},
title = {Double variable neighbourhood search with smoothing for the molecular
distance geometry problem},
journal = {J. Glob. Optim.},
volume = {43},
number = {2-3},
pages = {207--218},
year = {2009},
url = {https://doi.org/10.1007/s10898-007-9218-1},
doi = {10.1007/S10898-007-9218-1},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgo/LibertiLMM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/colognetwente/MucherinoLM09,
author = {Antonio Mucherino and
Carlile Lavor and
Nelson Maculan},
editor = {Sonia Cafieri and
Antonio Mucherino and
Giacomo Nannicini and
Fabien Tarissan and
Leo Liberti},
title = {The Molecular Distance Geometry Problem Applied to Protein Conformations},
booktitle = {Proceedings of the 8th Cologne-Twente Workshop on Graphs and Combinatorial
Optimization, {CTW} 2009, Paris, France, June 2-4 2009},
pages = {337--340},
year = {2009},
url = {http://www.lix.polytechnique.fr/ctw09/ctw09-proceedings.pdf\#page=349},
timestamp = {Thu, 12 Mar 2020 11:34:41 +0100},
biburl = {https://dblp.org/rec/conf/colognetwente/MucherinoLM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gecco/MucherinoLLM09,
author = {Antonio Mucherino and
Leo Liberti and
Carlile Lavor and
Nelson Maculan},
editor = {Franz Rothlauf},
title = {Comparisons between an exact and a metaheuristic algorithm for the
molecular distance geometry problem},
booktitle = {Genetic and Evolutionary Computation Conference, {GECCO} 2009, Proceedings,
Montreal, Qu{\'{e}}bec, Canada, July 8-12, 2009},
pages = {333--340},
publisher = {{ACM}},
year = {2009},
url = {https://doi.org/10.1145/1569901.1569948},
doi = {10.1145/1569901.1569948},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/gecco/MucherinoLLM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/imcsit/LavorMLM09,
author = {Carlile Lavor and
Antonio Mucherino and
Leo Liberti and
Nelson Maculan},
title = {Computing artificial backbones of hydrogen atoms in order to discover
protein backbones},
booktitle = {Proceedings of the International Multiconference on Computer Science
and Information Technology, {IMCSIT} 2009, Mragowo, Poland, 12-14
October 2009},
pages = {759--764},
publisher = {{IEEE}},
year = {2009},
url = {https://doi.org/10.1109/IMCSIT.2009.5352754},
doi = {10.1109/IMCSIT.2009.5352754},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/imcsit/LavorMLM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sac/LavorLMM09,
author = {Carlile Lavor and
Leo Liberti and
Antonio Mucherino and
Nelson Maculan},
editor = {Sung Y. Shin and
Sascha Ossowski},
title = {On a discretizable subclass of instances of the molecular distance
geometry problem},
booktitle = {Proceedings of the 2009 {ACM} Symposium on Applied Computing (SAC),
Honolulu, Hawaii, USA, March 9-12, 2009},
pages = {804--805},
publisher = {{ACM}},
year = {2009},
url = {https://doi.org/10.1145/1529282.1529451},
doi = {10.1145/1529282.1529451},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sac/LavorLMM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/opt/LavorLM09,
author = {Carlile Lavor and
Leo Liberti and
Nelson Maculan},
editor = {Christodoulos A. Floudas and
Panos M. Pardalos},
title = {Molecular Distance Geometry Problem},
booktitle = {Encyclopedia of Optimization, Second Edition},
pages = {2304--2311},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-0-387-74759-0\_400},
doi = {10.1007/978-0-387-74759-0\_400},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/opt/LavorLM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eor/DrazicLMM08,
author = {Milan Drazic and
Carlile Lavor and
Nelson Maculan and
Nenad Mladenovic},
title = {A continuous variable neighborhood search heuristic for finding the
three-dimensional structure of a molecule},
journal = {Eur. J. Oper. Res.},
volume = {185},
number = {3},
pages = {1265--1273},
year = {2008},
url = {https://doi.org/10.1016/j.ejor.2006.06.052},
doi = {10.1016/J.EJOR.2006.06.052},
timestamp = {Fri, 21 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/eor/DrazicLMM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/CarvalhoLP08,
author = {Ricardo dos Santos Carvalho and
Carlile Lavor and
F{\'{a}}bio Protti},
title = {Extending the geometric build-up algorithm for the molecular distance
geometry problem},
journal = {Inf. Process. Lett.},
volume = {108},
number = {4},
pages = {234--237},
year = {2008},
url = {https://doi.org/10.1016/j.ipl.2008.05.009},
doi = {10.1016/J.IPL.2008.05.009},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/CarvalhoLP08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/itor/LibertiLM08,
author = {Leo Liberti and
Carlile Lavor and
Nelson Maculan},
title = {A Branch-and-Prune algorithm for the Molecular Distance Geometry Problem},
journal = {Int. Trans. Oper. Res.},
volume = {15},
number = {1},
pages = {1--17},
year = {2008},
url = {https://doi.org/10.1111/j.1475-3995.2007.00622.x},
doi = {10.1111/J.1475-3995.2007.00622.X},
timestamp = {Thu, 09 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/itor/LibertiLM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/anor/BarbosaLR05,
author = {Helio J. C. Barbosa and
Carlile Lavor and
Fernanda M. P. Raupp},
title = {A GA-Simplex Hybrid Algorithm for Global Minimization of Molecular
Potential Energy Functions},
journal = {Ann. Oper. Res.},
volume = {138},
number = {1},
pages = {189--202},
year = {2005},
url = {https://doi.org/10.1007/s10479-005-2453-2},
doi = {10.1007/S10479-005-2453-2},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/anor/BarbosaLR05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/na/LavorM04,
author = {Carlile Lavor and
Nelson Maculan},
title = {A Function to Test Methods Applied to Global Minimization of Potential
Energy of Molecules},
journal = {Numer. Algorithms},
volume = {35},
number = {2-4},
pages = {287--300},
year = {2004},
url = {https://doi.org/10.1023/B:NUMA.0000021763.84725.b9},
doi = {10.1023/B:NUMA.0000021763.84725.B9},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/na/LavorM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sbrn/BarbosaRLLM00,
author = {Helio J. C. Barbosa and
Fernanda M. P. Raupp and
Carlile Lavor and
H. Lima and
Nelson Maculan},
editor = {Felipe M. G. Fran{\c{c}}a and
Carlos H. C. Ribeiro},
title = {A Hybrid Genetic Algorithm for Finding Stable Conformations of Small
Molecules},
booktitle = {6th Brazilian Symposium on Neural Networks {(SBRN} 2000), 22-25 November
2000, Rio de Janiero, Brazil},
pages = {90--94},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/SBRN.2000.889719},
doi = {10.1109/SBRN.2000.889719},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sbrn/BarbosaRLLM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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