BibTeX records: Norio Kobayashi

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@article{DBLP:journals/corr/abs-2402-04627,
  author       = {Julio Cesar Rangel Reyes and
                  Tarcisio Mendes de Farias and
                  Ana Claudia Sima and
                  Norio Kobayashi},
  title        = {{SPARQL} Generation: an analysis on fine-tuning OpenLLaMA for Question
                  Answering over a Life Science Knowledge Graph},
  journal      = {CoRR},
  volume       = {abs/2402.04627},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2402.04627},
  doi          = {10.48550/ARXIV.2402.04627},
  eprinttype    = {arXiv},
  eprint       = {2402.04627},
  timestamp    = {Wed, 14 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2402-04627.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/ReyesK23,
  author       = {Julio Cesar Rangel Reyes and
                  Norio Kobayashi},
  editor       = {Atsuko Yamaguchi and
                  Andrea Splendiani and
                  M. Scott Marshall and
                  Chris Baker and
                  Jerven T. Bolleman and
                  Albert Burger and
                  Leyla Jael Castro and
                  Ole Eigenbrod and
                  Sabine {\"{O}}sterle and
                  Martin Romacker and
                  Andra Waagmeester},
  title        = {Developing a semantic event search engine for biomedical events},
  booktitle    = {14th International Conference on Semantic Web Applications and Tools
                  for Health Care and Life Sciences {(SWAT4HCLS} 2023), Basel, Switzerland,
                  February 13-16, 2023},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {3415},
  pages        = {128--129},
  publisher    = {CEUR-WS.org},
  year         = {2023},
  url          = {https://ceur-ws.org/Vol-3415/paper-23.pdf},
  timestamp    = {Mon, 28 Aug 2023 17:23:07 +0200},
  biburl       = {https://dblp.org/rec/conf/swat4ls/ReyesK23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AbugessaisaRLSH21,
  author       = {Imad Abugessaisa and
                  Jordan A. Ramilowski and
                  Marina Lizio and
                  Jesicca Severin and
                  Akira Hasegawa and
                  Jayson Harshbarger and
                  Atsushi Kondo and
                  Shuhei Noguchi and
                  Chi Wai Yip and
                  Jasmine Li Ching Ooi and
                  Michihira Tagami and
                  Fumi Hori and
                  Saumya Agrawal and
                  Chung{-}Chau Hon and
                  M{\'{e}}lissa Cardon and
                  Shuya Ikeda and
                  Hiromasa Ono and
                  Hidemasa Bono and
                  Masaki Kato and
                  Kosuke Hashimoto and
                  Alessandro Bonetti and
                  Norio Kobayashi and
                  Jay W. Shin and
                  Michiel J. L. de Hoon and
                  Yoshihide Hayashizaki and
                  Piero Carninci and
                  Hideya Kawaji and
                  Takeya Kasukawa},
  title        = {{FANTOM} enters 20th year: expansion of transcriptomic atlases and
                  functional annotation of non-coding RNAs},
  journal      = {Nucleic Acids Res.},
  volume       = {49},
  number       = {Database-Issue},
  pages        = {D892--D898},
  year         = {2021},
  url          = {https://doi.org/10.1093/nar/gkaa1054},
  doi          = {10.1093/NAR/GKAA1054},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AbugessaisaRLSH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2110-10407,
  author       = {Satoshi Kume and
                  Hiroshi Masuya and
                  Yosky Kataoka and
                  Norio Kobayashi},
  title        = {Development of an Ontology for an Integrated Image Analysis Platform
                  to enable Global Sharing of Microscopy Imaging Data},
  journal      = {CoRR},
  volume       = {abs/2110.10407},
  year         = {2021},
  url          = {https://arxiv.org/abs/2110.10407},
  eprinttype    = {arXiv},
  eprint       = {2110.10407},
  timestamp    = {Thu, 28 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2110-10407.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2110-12058,
  author       = {Satoshi Kume and
                  Hiroshi Masuya and
                  Mitsuyo Maeda and
                  Mitsuo Suga and
                  Yosky Kataoka and
                  Norio Kobayashi},
  title        = {Development of Semantic Web-based Imaging Database for Biological
                  Morphome},
  journal      = {CoRR},
  volume       = {abs/2110.12058},
  year         = {2021},
  url          = {https://arxiv.org/abs/2110.12058},
  eprinttype    = {arXiv},
  eprint       = {2110.12058},
  timestamp    = {Fri, 29 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2110-12058.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MoritaSNNTTTYWM19,
  author       = {Masahiko Morita and
                  Kazuro Shimokawa and
                  Masaomi Nishimura and
                  Sakiko Nakamura and
                  Yuki Tsujimura and
                  Satoko Takemoto and
                  Takehiro Tawara and
                  Hideo Yokota and
                  Shuhei Wemler and
                  Daisuke Miyamoto and
                  Hidetoshi Ikeno and
                  Akira Sato and
                  Teiichi Furuichi and
                  Norio Kobayashi and
                  Yoshihiro Okumura and
                  Yoko Shiraishi{-}Yamaguchi and
                  Yuko Okamura{-}Oho},
  title        = {ViBrism {DB:} an interactive search and viewer platform for 2D/3D
                  anatomical images of gene expression and co-expression networks},
  journal      = {Nucleic Acids Res.},
  volume       = {47},
  number       = {Database-Issue},
  pages        = {D859--D866},
  year         = {2019},
  url          = {https://doi.org/10.1093/nar/gky951},
  doi          = {10.1093/NAR/GKY951},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MoritaSNNTTTYWM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/MooreKKOS19,
  author       = {Josh Moore and
                  Norio Kobayashi and
                  Susanne Kunis and
                  Shuichi Onami and
                  Jason R. Swedlow},
  editor       = {Ronald Cornet and
                  Andra Waagmeester},
  title        = {On Bringing Bioimaging Data into the Open (World)},
  booktitle    = {12th International Conference on Semantic Web Applications and Tools
                  for Health Care and Life Sciences},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2849},
  pages        = {44--53},
  publisher    = {CEUR-WS.org},
  year         = {2019},
  url          = {https://ceur-ws.org/Vol-2849/paper-06.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:02 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/MooreKKOS19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiMOS19,
  author       = {Norio Kobayashi and
                  Josh Moore and
                  Shuichi Onami and
                  Jason R. Swedlow},
  editor       = {Ronald Cornet and
                  Andra Waagmeester},
  title        = {{OME} Core Ontology: An OWL-based Life Science Imaging Data Model},
  booktitle    = {12th International Conference on Semantic Web Applications and Tools
                  for Health Care and Life Sciences},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2849},
  pages        = {149--150},
  publisher    = {CEUR-WS.org},
  year         = {2019},
  url          = {https://ceur-ws.org/Vol-2849/paper-25.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiMOS19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiYY19,
  author       = {Norio Kobayashi and
                  Yasunori Yamamoto and
                  Atsuko Yamaguchi},
  editor       = {Ronald Cornet and
                  Andra Waagmeester},
  title        = {UmakaData Extension: Toward Realization of a Practical {SPARQL} Endpoint
                  Discovery Service for Life Sciences},
  booktitle    = {12th International Conference on Semantic Web Applications and Tools
                  for Health Care and Life Sciences},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2849},
  pages        = {151--152},
  publisher    = {CEUR-WS.org},
  year         = {2019},
  url          = {https://ceur-ws.org/Vol-2849/paper-26.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiYY19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijswis/KobayashiKLM18,
  author       = {Norio Kobayashi and
                  Satoshi Kume and
                  Kai Lenz and
                  Hiroshi Masuya},
  title        = {{RIKEN} MetaDatabase: {A} Database Platform for Health Care and Life
                  Sciences as a Microcosm of Linked Open Data Cloud},
  journal      = {Int. J. Semantic Web Inf. Syst.},
  volume       = {14},
  number       = {1},
  pages        = {140--164},
  year         = {2018},
  url          = {https://doi.org/10.4018/IJSWIS.2018010106},
  doi          = {10.4018/IJSWIS.2018010106},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijswis/KobayashiKLM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/YamaguchiKYMK17,
  author       = {Atsuko Yamaguchi and
                  Kouji Kozaki and
                  Yasunori Yamamoto and
                  Hiroshi Masuya and
                  Norio Kobayashi},
  editor       = {Zhe Wang and
                  Anni{-}Yasmin Turhan and
                  Kewen Wang and
                  Xiaowang Zhang},
  title        = {Semantic Graph Analysis for Federated {LOD} Surfing in Life Sciences},
  booktitle    = {Semantic Technology - 7th Joint International Conference, {JIST} 2017,
                  Gold Coast, QLD, Australia, November 10-12, 2017, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {10675},
  pages        = {268--276},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-70682-5\_18},
  doi          = {10.1007/978-3-319-70682-5\_18},
  timestamp    = {Wed, 27 Jul 2022 08:20:14 +0200},
  biburl       = {https://dblp.org/rec/conf/jist/YamaguchiKYMK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/KumeMMSKK17,
  author       = {Satoshi Kume and
                  Hiroshi Masuya and
                  Mitsuyo Maeda and
                  Mitsuo Suga and
                  Yosky Kataoka and
                  Norio Kobayashi},
  editor       = {Zhe Wang and
                  Anni{-}Yasmin Turhan and
                  Kewen Wang and
                  Xiaowang Zhang},
  title        = {Development of Semantic Web-Based Imaging Database for Biological
                  Morphome},
  booktitle    = {Semantic Technology - 7th Joint International Conference, {JIST} 2017,
                  Gold Coast, QLD, Australia, November 10-12, 2017, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {10675},
  pages        = {277--285},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-70682-5\_19},
  doi          = {10.1007/978-3-319-70682-5\_19},
  timestamp    = {Tue, 07 Nov 2017 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/jist/KumeMMSKK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiKM17,
  author       = {Norio Kobayashi and
                  Satoshi Kume and
                  Hiroshi Masuya},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Andrea Splendiani and
                  M. Scott Marshall and
                  Paolo Romano and
                  Valentina Presutti},
  title        = {Metadata-driven Interdisciplinary Research Projects Using {RIKEN}
                  MetaDatabase},
  booktitle    = {Proceedings of the 10th International Conference on Semantic Web Applications
                  and Tools for Health Care and Life Sciences {(SWAT4LS} 2017), Rome,
                  Italy, December 4-7, 2017},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2042},
  publisher    = {CEUR-WS.org},
  year         = {2017},
  url          = {https://ceur-ws.org/Vol-2042/paper31.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:02 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiKM17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/YamaguchiKYMK17,
  author       = {Atsuko Yamaguchi and
                  Kouji Kozaki and
                  Yasunori Yamamoto and
                  Hiroshi Masuya and
                  Norio Kobayashi},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Andrea Splendiani and
                  M. Scott Marshall and
                  Paolo Romano and
                  Valentina Presutti},
  title        = {{LOD} Surfer {API:} Web {API} for {LOD} Surfing Using Class-Class
                  Relationships in Life Sciences},
  booktitle    = {Proceedings of the 10th International Conference on Semantic Web Applications
                  and Tools for Health Care and Life Sciences {(SWAT4LS} 2017), Rome,
                  Italy, December 4-7, 2017},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2042},
  publisher    = {CEUR-WS.org},
  year         = {2017},
  url          = {https://ceur-ws.org/Vol-2042/paper29.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/YamaguchiKYMK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/KobayashiLM16a,
  author       = {Norio Kobayashi and
                  Kai Lenz and
                  Hiroshi Masuya},
  editor       = {Kouji Kozaki and
                  Zhichun Wang and
                  Thepchai Supnithi and
                  Marut Buranarach},
  title        = {{RIKEN} MetaDatabase: {A} Database Platform as a Microcosm of Linked
                  Open Data Cloud in the Life Sciences},
  booktitle    = {Workshop and Poster Proceedings of the 6th Joint International Semantic
                  Technology Conference co-located with the 6th Joint International
                  Semantic Technology Conference {(JIST} 2016), Singapore, November
                  2-4, 2016},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1741},
  pages        = {46--49},
  publisher    = {CEUR-WS.org},
  year         = {2016},
  url          = {https://ceur-ws.org/Vol-1741/jist2016pd\_paper1.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:12 +0100},
  biburl       = {https://dblp.org/rec/conf/jist/KobayashiLM16a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/YamaguchiKLYMK16a,
  author       = {Atsuko Yamaguchi and
                  Kouji Kozaki and
                  Kai Lenz and
                  Yasunori Yamamoto and
                  Hiroshi Masuya and
                  Norio Kobayashi},
  editor       = {Kouji Kozaki and
                  Zhichun Wang and
                  Thepchai Supnithi and
                  Marut Buranarach},
  title        = {{SPARQL} Builder: Constructing {SPARQL} Query by Traversing Class-Class
                  Relationships for Life Science Databases},
  booktitle    = {Workshop and Poster Proceedings of the 6th Joint International Semantic
                  Technology Conference co-located with the 6th Joint International
                  Semantic Technology Conference {(JIST} 2016), Singapore, November
                  2-4, 2016},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1741},
  pages        = {58--61},
  publisher    = {CEUR-WS.org},
  year         = {2016},
  url          = {https://ceur-ws.org/Vol-1741/jist2016pd\_paper4.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/jist/YamaguchiKLYMK16a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/KobayashiLM16,
  author       = {Norio Kobayashi and
                  Kai Lenz and
                  Hiroshi Masuya},
  editor       = {Yuan{-}Fang Li and
                  Wei Hu and
                  Jin Song Dong and
                  Grigoris Antoniou and
                  Zhe Wang and
                  Jun Sun and
                  Yang Liu},
  title        = {{RIKEN} MetaDatabase: {A} Database Platform as a Microcosm of Linked
                  Open Data Cloud in the Life Sciences},
  booktitle    = {Semantic Technology - 6th Joint International Conference, {JIST} 2016,
                  Singapore, Singapore, November 2-4, 2016, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {10055},
  pages        = {99--115},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-50112-3\_8},
  doi          = {10.1007/978-3-319-50112-3\_8},
  timestamp    = {Tue, 14 May 2019 10:00:39 +0200},
  biburl       = {https://dblp.org/rec/conf/jist/KobayashiLM16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/YamaguchiKLYMK16,
  author       = {Atsuko Yamaguchi and
                  Kouji Kozaki and
                  Kai Lenz and
                  Yasunori Yamamoto and
                  Hiroshi Masuya and
                  Norio Kobayashi},
  editor       = {Yuan{-}Fang Li and
                  Wei Hu and
                  Jin Song Dong and
                  Grigoris Antoniou and
                  Zhe Wang and
                  Jun Sun and
                  Yang Liu},
  title        = {Semantic Data Acquisition by Traversing Class-Class Relationships
                  Over Linked Open Data},
  booktitle    = {Semantic Technology - 6th Joint International Conference, {JIST} 2016,
                  Singapore, Singapore, November 2-4, 2016, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {10055},
  pages        = {136--151},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-50112-3\_11},
  doi          = {10.1007/978-3-319-50112-3\_11},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/jist/YamaguchiKLYMK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/KumeMKK16,
  author       = {Satoshi Kume and
                  Hiroshi Masuya and
                  Yosky Kataoka and
                  Norio Kobayashi},
  editor       = {Takahiro Kawamura and
                  Heiko Paulheim},
  title        = {Development of an Ontology for an Integrated Image Analysis Platform
                  to enable Global Sharing of Microscopy Imaging Data},
  booktitle    = {Proceedings of the {ISWC} 2016 Posters {\&} Demonstrations Track
                  co-located with 15th International Semantic Web Conference {(ISWC}
                  2016), Kobe, Japan, October 19, 2016},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1690},
  publisher    = {CEUR-WS.org},
  year         = {2016},
  url          = {https://ceur-ws.org/Vol-1690/paper93.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:04 +0100},
  biburl       = {https://dblp.org/rec/conf/semweb/KumeMKK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/LenzMK16,
  author       = {Kai Lenz and
                  Hiroshi Masuya and
                  Norio Kobayashi},
  editor       = {Takahiro Kawamura and
                  Heiko Paulheim},
  title        = {{RIKEN} MetaDatabase: a Database Publication Platform for RIKENs Life-science
                  Researchers that Promotes Research Collaborations over Different Research
                  Area},
  booktitle    = {Proceedings of the {ISWC} 2016 Posters {\&} Demonstrations Track
                  co-located with 15th International Semantic Web Conference {(ISWC}
                  2016), Kobe, Japan, October 19, 2016},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1690},
  publisher    = {CEUR-WS.org},
  year         = {2016},
  url          = {https://ceur-ws.org/Vol-1690/paper34.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/semweb/LenzMK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/TakatsukiSKTOOL16,
  author       = {Terue Takatsuki and
                  Mikako Saito and
                  Sadahiro Kumagai and
                  Eiki Takayama and
                  Kazuya Ohshima and
                  Nozomu Ohshiro and
                  Kai Lenz and
                  Nobuhiko Tanaka and
                  Norio Kobayashi and
                  Hiroshi Masuya},
  editor       = {Takahiro Kawamura and
                  Heiko Paulheim},
  title        = {A {RDF} based Portal of Biological Phenotype Data produced in Japan},
  booktitle    = {Proceedings of the {ISWC} 2016 Posters {\&} Demonstrations Track
                  co-located with 15th International Semantic Web Conference {(ISWC}
                  2016), Kobe, Japan, October 19, 2016},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1690},
  publisher    = {CEUR-WS.org},
  year         = {2016},
  url          = {https://ceur-ws.org/Vol-1690/paper10.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/semweb/TakatsukiSKTOOL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/YamaguchiKLYMK16,
  author       = {Atsuko Yamaguchi and
                  Kouji Kozaki and
                  Kai Lenz and
                  Yasunori Yamamoto and
                  Hiroshi Masuya and
                  Norio Kobayashi},
  editor       = {Takahiro Kawamura and
                  Heiko Paulheim},
  title        = {Data Acquisition by Traversing Class-Class Relationships over the
                  Linked Open Data},
  booktitle    = {Proceedings of the {ISWC} 2016 Posters {\&} Demonstrations Track
                  co-located with 15th International Semantic Web Conference {(ISWC}
                  2016), Kobe, Japan, October 19, 2016},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1690},
  publisher    = {CEUR-WS.org},
  year         = {2016},
  url          = {https://ceur-ws.org/Vol-1690/paper95.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/semweb/YamaguchiKLYMK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/YamaguchiYKLMK16,
  author       = {Atsuko Yamaguchi and
                  Yasunori Yamamoto and
                  Kouji Kozaki and
                  Kai Lenz and
                  Hiroshi Masuya and
                  Norio Kobayashi},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Andrea Splendiani and
                  M. Scott Marshall and
                  Paolo Romano},
  title        = {{SPARQL} Query Construction with Monitoring Service for Endpoints},
  booktitle    = {Proceedings of the 9th International Conference Semantic Web Applications
                  and Tools for Life Sciences, Amsterdam, The Netherlands, December
                  5-8, 2016},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1795},
  publisher    = {CEUR-WS.org},
  year         = {2016},
  url          = {https://ceur-ws.org/Vol-1795/paper43.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:02 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/YamaguchiYKLMK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/YamaguchiKLWYK15,
  author       = {Atsuko Yamaguchi and
                  Kouji Kozaki and
                  Kai Lenz and
                  Hongyan Wu and
                  Yasunori Yamamoto and
                  Norio Kobayashi},
  editor       = {Guilin Qi and
                  Kouji Kozaki and
                  Jeff Z. Pan and
                  Siwei Yu},
  title        = {Efficiently Finding Paths Between Classes to Build a {SPARQL} Query
                  for Life-Science Databases},
  booktitle    = {Semantic Technology - 5th Joint International Conference, {JIST} 2015,
                  Yichang, China, November 11-13, 2015, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {9544},
  pages        = {321--330},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-31676-5\_24},
  doi          = {10.1007/978-3-319-31676-5\_24},
  timestamp    = {Mon, 07 Jun 2021 18:40:16 +0200},
  biburl       = {https://dblp.org/rec/conf/jist/YamaguchiKLWYK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/YamaguchiOKKKLN15,
  author       = {Atsuko Yamaguchi and
                  Katsuhiko Okubo and
                  Norio Kobayashi and
                  Kouji Kozaki and
                  Sadahiro Kumagai and
                  Kai Lenz and
                  Tomoe Nobusada and
                  Hongyan Wu and
                  Yasunori Yamamoto and
                  Hideki Hatanaka},
  editor       = {James Malone and
                  Robert Stevens and
                  Kerstin Forsberg and
                  Andrea Splendiani},
  title        = {RDF-Based Integration with {SPARQL} Building System for Life Science
                  Database Archive},
  booktitle    = {Proceedings of the 8th Semantic Web Applications and Tools for Life
                  Sciences International Conference, Cambridge UK, December 7-10, 2015},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1546},
  pages        = {195--196},
  publisher    = {CEUR-WS.org},
  year         = {2015},
  url          = {https://ceur-ws.org/Vol-1546/poster\_24.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:03 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/YamaguchiOKKKLN15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/MasuyaTSTOOLTMK15,
  author       = {Hiroshi Masuya and
                  Terue Takatsuki and
                  Mikako Saito and
                  Eiki Takayama and
                  Kazuya Ohshima and
                  Nozomu Ohshiro and
                  Kai Lenz and
                  Nobuhiko Tanaka and
                  Hiroshi Mori and
                  Shuichi Kawashima and
                  Norio Kobayashi},
  editor       = {James Malone and
                  Robert Stevens and
                  Kerstin Forsberg and
                  Andrea Splendiani},
  title        = {RDF-based Data Sharing of Bio-resource Related Information},
  booktitle    = {Proceedings of the 8th Semantic Web Applications and Tools for Life
                  Sciences International Conference, Cambridge UK, December 7-10, 2015},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1546},
  pages        = {210--211},
  publisher    = {CEUR-WS.org},
  year         = {2015},
  url          = {https://ceur-ws.org/Vol-1546/poster\_57.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/MasuyaTSTOOLTMK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiLM15,
  author       = {Norio Kobayashi and
                  Kai Lenz and
                  Hiroshi Masuya},
  editor       = {James Malone and
                  Robert Stevens and
                  Kerstin Forsberg and
                  Andrea Splendiani},
  title        = {{RIKEN} Meta Database: {A} Life-science Metadata Database Based on
                  the Semantic Web},
  booktitle    = {Proceedings of the 8th Semantic Web Applications and Tools for Life
                  Sciences International Conference, Cambridge UK, December 7-10, 2015},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1546},
  pages        = {222--223},
  publisher    = {CEUR-WS.org},
  year         = {2015},
  url          = {https://ceur-ws.org/Vol-1546/poster\_73.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiLM15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/YamaguchiKLWK14,
  author       = {Atsuko Yamaguchi and
                  Kouji Kozaki and
                  Kai Lenz and
                  Hongyan Wu and
                  Norio Kobayashi},
  editor       = {Dhavalkumar Thakker and
                  Daniel Schwabe and
                  Kouji Kozaki and
                  Roberto Garc{\'{\i}}a and
                  Chris Dijkshoorn and
                  Riichiro Mizoguchi},
  title        = {An Intelligent {SPARQL} Query Builder for Exploration of Various Life-science
                  Databases},
  booktitle    = {Proceedings of the 3rd International Workshop on Intelligent Exploration
                  of Semantic Data {(IESD} 2014) co-located with the 13th International
                  Semantic Web Conference {(ISWC} 2014), Riva del Garda, Italy, October
                  20, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1279},
  publisher    = {CEUR-WS.org},
  year         = {2014},
  url          = {https://ceur-ws.org/Vol-1279/iesd14\_10.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:05 +0100},
  biburl       = {https://dblp.org/rec/conf/semweb/YamaguchiKLWK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiLWKY14,
  author       = {Norio Kobayashi and
                  Kai Lenz and
                  Hongyan Wu and
                  Kouji Kozaki and
                  Atsuko Yamaguchi},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Paolo Romano and
                  M. Scott Marshall and
                  Andrea Splendiani},
  title        = {Prototype Implementation of {SPARQL} Builder for Life-science Databases
                  by Intelligent Schema Analysis on {RDF} datasets},
  booktitle    = {Proceedings of the 7th International Workshop on Semantic Web Applications
                  and Tools for Life Sciences, Berlin, Germany, December 9-11, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1320},
  publisher    = {CEUR-WS.org},
  year         = {2014},
  url          = {https://ceur-ws.org/Vol-1320/paper\_26.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:02 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiLWKY14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MakitaKYDMNMTITBKWMT13,
  author       = {Yuko Makita and
                  Norio Kobayashi and
                  Yuko Yoshida and
                  Koji Doi and
                  Yoshiki Mochizuki and
                  Koro Nishikata and
                  Akihiro Matsushima and
                  Satoshi Takahashi and
                  Manabu Ishii and
                  Terue Takatsuki and
                  Rinki Bhatia and
                  Zolzaya Khadbaatar and
                  Hajime Watabe and
                  Hiroshi Masuya and
                  Tetsuro Toyoda},
  title        = {PosMed: ranking genes and bioresources based on Semantic Web Association
                  Study},
  journal      = {Nucleic Acids Res.},
  volume       = {41},
  number       = {Webserver-Issue},
  pages        = {109--114},
  year         = {2013},
  url          = {https://doi.org/10.1093/nar/gkt474},
  doi          = {10.1093/NAR/GKT474},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MakitaKYDMNMTITBKWMT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiMIMMDNGTMT13,
  author       = {Norio Kobayashi and
                  Yuko Makita and
                  Manabu Ishii and
                  Akihiro Matsushima and
                  Yoshiki Mochizuki and
                  Koji Doi and
                  Koro Nishikata and
                  David Gifford and
                  Terue Takatsuki and
                  Hiroshi Masuya and
                  Tetsuro Toyoda},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Paolo Romano and
                  M. Scott Marshall and
                  Andrea Splendiani},
  title        = {PosMed: {A} Biomedical Entity Prioritisation Tool Based on Statistical
                  Inference over Literature and the Semantic Web},
  booktitle    = {Proceedings of the 6th International Workshop on Semantic Web Applications
                  and Tools for Life Sciences, Edinburgh, UK, December 10, 2013},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1114},
  publisher    = {CEUR-WS.org},
  year         = {2013},
  url          = {https://ceur-ws.org/Vol-1114/Poster\_Kobayashi.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:03 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiMIMMDNGTMT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aswc/MasuyaTMYMKYNTO12,
  author       = {Hiroshi Masuya and
                  Terue Takatsuki and
                  Yuko Makita and
                  Yuko Yoshida and
                  Yoshiki Mochizuki and
                  Norio Kobayashi and
                  Atsushi Yoshiki and
                  Yukio Nakamura and
                  Tetsuro Toyoda and
                  Yuichi Obata},
  editor       = {Hideaki Takeda and
                  Yuzhong Qu and
                  Riichiro Mizoguchi and
                  Yoshinobu Kitamura},
  title        = {Development of Linked Open Data for Bioresources},
  booktitle    = {Semantic Technology, Second Joint International Conference, {JIST}
                  2012, Nara, Japan, December 2-4, 2012. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7774},
  pages        = {350--355},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-37996-3\_28},
  doi          = {10.1007/978-3-642-37996-3\_28},
  timestamp    = {Sun, 02 Jun 2019 21:19:40 +0200},
  biburl       = {https://dblp.org/rec/conf/aswc/MasuyaTMYMKYNTO12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MasuyaMKNYMDTWTIMTHKFKWNYMFMOHMOT11,
  author       = {Hiroshi Masuya and
                  Yuko Makita and
                  Norio Kobayashi and
                  Koro Nishikata and
                  Yuko Yoshida and
                  Yoshiki Mochizuki and
                  Koji Doi and
                  Terue Takatsuki and
                  Kazunori Waki and
                  Nobuhiko Tanaka and
                  Manabu Ishii and
                  Akihiro Matsushima and
                  Satoshi Takahashi and
                  Atsushi Hijikata and
                  Kouji Kozaki and
                  Teiichi Furuichi and
                  Hideya Kawaji and
                  Shigeharu Wakana and
                  Yukio Nakamura and
                  Atsushi Yoshiki and
                  Takehide Murata and
                  Kaoru Fukami{-}Kobayashi and
                  S. Sujatha Mohan and
                  Osamu Ohara and
                  Yoshihide Hayashizaki and
                  Riichiro Mizoguchi and
                  Yuichi Obata and
                  Tetsuro Toyoda},
  title        = {The {RIKEN} integrated database of mammals},
  journal      = {Nucleic Acids Res.},
  volume       = {39},
  number       = {Database-Issue},
  pages        = {861--870},
  year         = {2011},
  url          = {https://doi.org/10.1093/nar/gkq1078},
  doi          = {10.1093/NAR/GKQ1078},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MasuyaMKNYMDTWTIMTHKFKWNYMFMOHMOT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KobayashiITMMT11,
  author       = {Norio Kobayashi and
                  Manabu Ishii and
                  Satoshi Takahashi and
                  Yoshiki Mochizuki and
                  Akihiro Matsushima and
                  Tetsuro Toyoda},
  title        = {Semantic-JSON: a lightweight web service interface for Semantic Web
                  contents integrating multiple life science databases},
  journal      = {Nucleic Acids Res.},
  volume       = {39},
  number       = {Web-Server-Issue},
  pages        = {533--540},
  year         = {2011},
  url          = {https://doi.org/10.1093/nar/gkr353},
  doi          = {10.1093/NAR/GKR353},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/KobayashiITMMT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MasuyaGTWOKKDKHWTM11,
  author       = {Hiroshi Masuya and
                  Georgios V. Gkoutos and
                  Nobuhiko Tanaka and
                  Kazunori Waki and
                  Yoshihiro Okuda and
                  Tatsuya Kushida and
                  Norio Kobayashi and
                  Koji Doi and
                  Kouji Kozaki and
                  Robert Hoehndorf and
                  Shigeharu Wakana and
                  Tetsuro Toyoda and
                  Riichiro Mizoguchi},
  editor       = {Olivier Bodenreider and
                  Maryann E. Martone and
                  Alan Ruttenberg},
  title        = {An Advanced Strategy for Integration of Biological Measurement Data},
  booktitle    = {Proceedings of the 2nd International Conference on Biomedical Ontology,
                  Buffalo, NY, USA, July 26-30, 2011},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {833},
  publisher    = {CEUR-WS.org},
  year         = {2011},
  url          = {https://ceur-ws.org/Vol-833/paper11.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:24 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/MasuyaGTWOKKDKHWTM11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiT11,
  author       = {Norio Kobayashi and
                  Tetsuro Toyoda},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Paolo Romano and
                  M. Scott Marshall and
                  Andrea Splendiani},
  title        = {BioSPARQL: ontology-based smart building of {SPARQL} queries for biological
                  linked open data},
  booktitle    = {Proceedings of the 4th International Workshop on Semantic Web Applications
                  and Tools for the Life Sciences, {SWAT4LS} 2011, London, United Kingdom,
                  December 07-09, 2011},
  pages        = {47--49},
  publisher    = {{ACM}},
  year         = {2011},
  url          = {https://doi.org/10.1145/2166896.2166912},
  doi          = {10.1145/2166896.2166912},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MatsushimaKMIKEUMT09,
  author       = {Akihiro Matsushima and
                  Norio Kobayashi and
                  Yoshiki Mochizuki and
                  Manabu Ishii and
                  Shuji Kawaguchi and
                  Takaho A. Endo and
                  Ryo Umetsu and
                  Yuko Makita and
                  Tetsuro Toyoda},
  title        = {OmicBrowse: a Flash-based high-performance graphics interface for
                  genomic resources},
  journal      = {Nucleic Acids Res.},
  volume       = {37},
  number       = {Web-Server-Issue},
  pages        = {57--62},
  year         = {2009},
  url          = {https://doi.org/10.1093/nar/gkp404},
  doi          = {10.1093/NAR/GKP404},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MatsushimaKMIKEUMT09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/YoshidaMHAMIMMWKT09,
  author       = {Yuko Yoshida and
                  Yuko Makita and
                  Naohiko Heida and
                  Satomi Asano and
                  Akihiro Matsushima and
                  Manabu Ishii and
                  Yoshiki Mochizuki and
                  Hiroshi Masuya and
                  Shigeharu Wakana and
                  Norio Kobayashi and
                  Tetsuro Toyoda},
  title        = {PosMed (Positional Medline): prioritizing genes with an artificial
                  neural network comprising medical documents to accelerate positional
                  cloning},
  journal      = {Nucleic Acids Res.},
  volume       = {37},
  number       = {Web-Server-Issue},
  pages        = {147--152},
  year         = {2009},
  url          = {https://doi.org/10.1093/nar/gkp384},
  doi          = {10.1093/NAR/GKP384},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/YoshidaMHAMIMMWKT09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KobayashiT08,
  author       = {Norio Kobayashi and
                  Tetsuro Toyoda},
  title        = {Statistical search on the Semantic Web},
  journal      = {Bioinform.},
  volume       = {24},
  number       = {7},
  pages        = {1002--1010},
  year         = {2008},
  url          = {https://doi.org/10.1093/bioinformatics/btn054},
  doi          = {10.1093/BIOINFORMATICS/BTN054},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KobayashiT08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiMKKYMM08,
  author       = {Norio Kobayashi and
                  Yuko Makita and
                  Eli Kaminuma and
                  Shuji Kawaguchi and
                  Yuko Yoshida and
                  Yoshiki Mochizuki and
                  Akihiro Matsushima and
                  Manabu Ishii and
                  Ryo Umetsu and
                  Satomi Asano and
                  Naohiko Heida and
                  Tetsuya Sakurai and
                  Takashi Kuromori and
                  Kazuo Shinozaki and
                  Tetsuro Toyoda},
  editor       = {Albert Burger and
                  Adrian Paschke and
                  Paolo Romano and
                  Andrea Splendiani},
  title        = {A Secure Data Repository Integrating Huge Volumes of Digital Contents
                  as a Semantic Web},
  booktitle    = {Proceedings of the Workshop on Semantic Web Applications and Tools
                  for Life Sciences {(} {SWAT4LS} {)} Edinburgh, United Kingdom, November
                  28, 2008},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {435},
  publisher    = {CEUR-WS.org},
  year         = {2008},
  url          = {https://ceur-ws.org/Vol-435/poster11.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:02 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiMKKYMM08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/KobayashiT08,
  author       = {Norio Kobayashi and
                  Tetsuro Toyoda},
  editor       = {Albert Burger and
                  Adrian Paschke and
                  Paolo Romano and
                  Andrea Splendiani},
  title        = {Penta and Hexa Statements are Suitable for Representing Omics Knowledge
                  on the Semantic Web},
  booktitle    = {Proceedings of the Workshop on Semantic Web Applications and Tools
                  for Life Sciences {(} {SWAT4LS} {)} Edinburgh, United Kingdom, November
                  28, 2008},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {435},
  publisher    = {CEUR-WS.org},
  year         = {2008},
  url          = {https://ceur-ws.org/Vol-435/poster09.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/KobayashiT08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ToyodaMPHKS07,
  author       = {Tetsuro Toyoda and
                  Yoshiki Mochizuki and
                  Keith Player and
                  Naohiko Heida and
                  Norio Kobayashi and
                  Yoshiyuki Sakaki},
  title        = {OmicBrowse: a browser of multidimensional omics annotations},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {4},
  pages        = {524--526},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btl523},
  doi          = {10.1093/BIOINFORMATICS/BTL523},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ToyodaMPHKS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aplas/KobayashiMI01,
  author       = {Norio Kobayashi and
                  Mircea Marin and
                  Tetsuo Ida},
  title        = {Collaborative Constraint Functional Logic Programming in an Open Environment},
  booktitle    = {The Second Asian Workshop on Programming Languages and Systems, APLAS'01,
                  Korea Advanced Institute of Science and Technology, Daejeon, Korea,
                  December 17-18, 2001, Proceedings},
  pages        = {49--59},
  year         = {2001},
  timestamp    = {Tue, 01 Jun 2004 13:15:57 +0200},
  biburl       = {https://dblp.org/rec/conf/aplas/KobayashiMI01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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