BibTeX records: John E. Karro

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Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

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@article{DBLP:journals/bioinformatics/SchaefferFLK16,
  author       = {Carly E. Schaeffer and
                  Nathaniel D. Figueroa and
                  Xiaolin Liu and
                  John E. Karro},
  title        = {phRAIDER: Pattern-Hunter based Rapid Ab Initio Detection of Elementary
                  Repeats},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {12},
  pages        = {209--215},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btw258},
  doi          = {10.1093/BIOINFORMATICS/BTW258},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/SchaefferFLK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/SreeskandarajanFKL14,
  author       = {Sutharzan Sreeskandarajan and
                  Michelle M. Flowers and
                  John E. Karro and
                  Chun Liang},
  title        = {A MATLAB-based tool for accurate detection of perfect overlapping
                  and nested inverted repeats in {DNA} sequences},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {6},
  pages        = {887--888},
  year         = {2014},
  url          = {https://doi.org/10.1093/bioinformatics/btt651},
  doi          = {10.1093/BIOINFORMATICS/BTT651},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/SreeskandarajanFKL14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/wob/FigueroaLWK13,
  author       = {Nathaniel D. Figueroa and
                  Xiaolin Liu and
                  Jiajun Wang and
                  John E. Karro},
  editor       = {Jo{\~{a}}o C. Setubal and
                  Nalvo F. Almeida},
  title        = {{RAIDER:} Rapid Ab Initio Detection of Elementary Repeats},
  booktitle    = {Advances in Bioinformatics and Computational Biology - 8th Brazilian
                  Symposium on Bioinformatics, {BSB} 2013, Recife, Brazil, November
                  3-7, 2013, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {8213},
  pages        = {170--180},
  publisher    = {Springer},
  year         = {2013},
  url          = {https://doi.org/10.1007/978-3-319-02624-4\_16},
  doi          = {10.1007/978-3-319-02624-4\_16},
  timestamp    = {Tue, 14 May 2019 10:00:50 +0200},
  biburl       = {https://dblp.org/rec/conf/wob/FigueroaLWK13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/iccabs/MortonALK12,
  author       = {James T. Morton and
                  Patricia Abrudan and
                  Chun Liang and
                  John E. Karro},
  editor       = {Sorin Istrail and
                  Ion I. Mandoiu and
                  Mihai Pop and
                  Sanguthevar Rajasekaran and
                  John L. Spouge},
  title        = {Poster: Sequence classification of homopolymer emissions {(SCOPE)}},
  booktitle    = {{IEEE} 2nd International Conference on Computational Advances in Bio
                  and Medical Sciences, {ICCABS} 2012, Las Vegas, NV, USA, February
                  23-25, 2012},
  pages        = {1},
  publisher    = {{IEEE} Computer Society},
  year         = {2012},
  url          = {https://doi.org/10.1109/ICCABS.2012.6182655},
  doi          = {10.1109/ICCABS.2012.6182655},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/iccabs/MortonALK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/iccabs/ZhangROMKLK12,
  author       = {Yuan Zhang and
                  Dhananjai Madhava Rao and
                  Mufit Ozden and
                  Jens Mueller and
                  Praveen Raj Kumar and
                  Chun Liang and
                  John E. Karro},
  editor       = {Sorin Istrail and
                  Ion I. Mandoiu and
                  Mihai Pop and
                  Sanguthevar Rajasekaran and
                  John L. Spouge},
  title        = {Poster: De novo expression fragment assembly from Spanning Trees {(EAST)}},
  booktitle    = {{IEEE} 2nd International Conference on Computational Advances in Bio
                  and Medical Sciences, {ICCABS} 2012, Las Vegas, NV, USA, February
                  23-25, 2012},
  pages        = {1},
  publisher    = {{IEEE} Computer Society},
  year         = {2012},
  url          = {https://doi.org/10.1109/ICCABS.2012.6182662},
  doi          = {10.1109/ICCABS.2012.6182662},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/iccabs/ZhangROMKLK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/iccabs/ZhangRMOLK11,
  author       = {Yuan Zhang and
                  Dhananjai Madhava Rao and
                  Jens Mueller and
                  Mufit Ozden and
                  Chun Liang and
                  John E. Karro},
  editor       = {Ion I. Mandoiu and
                  Satoru Miyano and
                  Teresa M. Przytycka and
                  Sanguthevar Rajasekaran},
  title        = {Workshop: Transcript assembly through a d\({}^{\mbox{2}}\)-based {MST}
                  approach},
  booktitle    = {{IEEE} 1st International Conference on Computational Advances in Bio
                  and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
                  2011},
  pages        = {279},
  publisher    = {{IEEE} Computer Society},
  year         = {2011},
  url          = {https://doi.org/10.1109/ICCABS.2011.5729933},
  doi          = {10.1109/ICCABS.2011.5729933},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/iccabs/ZhangRMOLK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/RaoMOZLK10,
  author       = {Dhananjai Madhava Rao and
                  J. C. Moler and
                  Mufit Ozden and
                  Y. Zhang and
                  C. Liang and
                  John E. Karro},
  title        = {{PEACE:} Parallel Environment for Assembly and Clustering of Gene
                  Expression},
  journal      = {Nucleic Acids Res.},
  volume       = {38},
  number       = {Web-Server-Issue},
  pages        = {737--742},
  year         = {2010},
  url          = {https://doi.org/10.1093/nar/gkq470},
  doi          = {10.1093/NAR/GKQ470},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/RaoMOZLK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/PeiferKG08,
  author       = {Martin Peifer and
                  John E. Karro and
                  H. H. von Gr{\"{u}}nberg},
  title        = {Is there an acceleration of the \emph{CpG} transition rate during
                  the mammalian radiation?},
  journal      = {Bioinform.},
  volume       = {24},
  number       = {19},
  pages        = {2157--2164},
  year         = {2008},
  url          = {https://doi.org/10.1093/bioinformatics/btn391},
  doi          = {10.1093/BIOINFORMATICS/BTN391},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/PeiferKG08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/KarroYZZCCHG07,
  author       = {John E. Karro and
                  Yangpan Yan and
                  Deyou Zheng and
                  Zhaolei Zhang and
                  Nicholas Carriero and
                  Philip Cayting and
                  Paul M. Harrison and
                  Mark Gerstein},
  title        = {Pseudogene.org: a comprehensive database and comparison platform for
                  pseudogene annotation},
  journal      = {Nucleic Acids Res.},
  volume       = {35},
  number       = {Database-Issue},
  pages        = {55--60},
  year         = {2007},
  url          = {https://doi.org/10.1093/nar/gkl851},
  doi          = {10.1093/NAR/GKL851},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/KarroYZZCCHG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/ZhangCZKHG06,
  author       = {Zhaolei Zhang and
                  Nicholas Carriero and
                  Deyou Zheng and
                  John E. Karro and
                  Paul M. Harrison and
                  Mark Gerstein},
  title        = {PseudoPipe: an automated pseudogene identification pipeline},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {12},
  pages        = {1437--1439},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl116},
  doi          = {10.1093/BIOINFORMATICS/BTL116},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ZhangCZKHG06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

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