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ORCIDBibTeX records: Shantenu Jha
@article{DBLP:journals/corr/abs-2403-15721,
author = {Arup Kumar Sarker and
Aymen Alsaadi and
Niranda Perera and
Mills Staylor and
Gregor von Laszewski and
Matteo Turilli and
Ozgur Ozan Kilic and
Mikhail Titov and
Andr{\'{e}} Merzky and
Shantenu Jha and
Geoffrey Fox},
title = {Design and Implementation of an Analysis Pipeline for Heterogeneous
Data},
journal = {CoRR},
volume = {abs/2403.15721},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.15721},
doi = {10.48550/ARXIV.2403.15721},
eprinttype = {arXiv},
eprint = {2403.15721},
timestamp = {Tue, 09 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-15721.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2403-18073,
author = {Ozgur Ozan Kilic and
Tianle Wang and
Matteo Turilli and
Mikhail Titov and
Andr{\'{e}} Merzky and
Line Pouchard and
Shantenu Jha},
title = {Workflow Mini-Apps: Portable, Scalable, Tunable {\&} Faithful
Representations of Scientific Workflows},
journal = {CoRR},
volume = {abs/2403.18073},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.18073},
doi = {10.48550/ARXIV.2403.18073},
eprinttype = {arXiv},
eprint = {2403.18073},
timestamp = {Wed, 10 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-18073.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhpca/DommerCKRWAROMB23,
author = {Abigail C. Dommer and
Lorenzo Casalino and
Fiona L. Kearns and
Mia Rosenfeld and
Nicholas Wauer and
Surl{-}Hee Ahn and
John Russo and
A. Sofia F. Oliveira and
Clare Morris and
Anthony T. Bogetti and
Anda Trifan and
Alexander Brace and
Terra Sztain and
Austin Clyde and
Heng Ma and
S. Chakra Chennubhotla and
Hyungro Lee and
Matteo Turilli and
Syma Khalid and
Teresa Tamayo{-}Mendoza and
Matthew Welborn and
Anders S. Christensen and
Daniel G. A. Smith and
Zhuoran Qiao and
Sai K. Sirumalla and
Michael O'Connor and
Frederick R. Manby and
Anima Anandkumar and
David J. Hardy and
James C. Phillips and
Abraham C. Stern and
Josh Romero and
David Clark and
Mitchell Dorrell and
Tom Maiden and
Lei Huang and
John D. McCalpin and
Christopher J. Woods and
Alan Gray and
Matt Williams and
Bryan Barker and
Harinda Rajapaksha and
Richard Pitts and
Tom Gibbs and
John E. Stone and
Daniel M. Zuckerman and
Adrian J. Mulholland and
Thomas F. Miller III and
Shantenu Jha and
Arvind Ramanathan and
Lillian T. Chong and
Rommie E. Amaro},
title = {{\#}COVIDisAirborne: AI-enabled multiscale computational microscopy
of delta SARS-CoV-2 in a respiratory aerosol},
journal = {Int. J. High Perform. Comput. Appl.},
volume = {37},
number = {1},
pages = {28--44},
year = {2023},
url = {https://doi.org/10.1177/10943420221128233},
doi = {10.1177/10943420221128233},
timestamp = {Thu, 28 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijhpca/DommerCKRWAROMB23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SarkarLVTVJS23,
author = {Daipayan Sarkar and
Hyungro Lee and
John W. Vant and
Matteo Turilli and
Josh Vincent Vermaas and
Shantenu Jha and
Abhishek Singharoy},
title = {Adaptive Ensemble Refinement of Protein Structures in High Resolution
Electron Microscopy Density Maps with Radical Augmented Molecular
Dynamics Flexible Fitting},
journal = {J. Chem. Inf. Model.},
volume = {63},
number = {18},
pages = {5834--5846},
year = {2023},
url = {https://doi.org/10.1021/acs.jcim.3c00350},
doi = {10.1021/ACS.JCIM.3C00350},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/SarkarLVTVJS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/patterns/WooQTJADY23,
author = {Hyun{-}Myung Woo and
Xiaoning Qian and
Li Tan and
Shantenu Jha and
Francis J. Alexander and
Edward R. Dougherty and
Byung{-}Jun Yoon},
title = {Optimal decision-making in high-throughput virtual screening pipelines},
journal = {Patterns},
volume = {4},
number = {11},
pages = {100875},
year = {2023},
url = {https://doi.org/10.1016/j.patter.2023.100875},
doi = {10.1016/J.PATTER.2023.100875},
timestamp = {Tue, 28 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/patterns/WooQTJADY23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/HateganMarandiucMCMOTWWCFSJL23,
author = {Mihael Hategan{-}Marandiuc and
Andr{\'{e}} Merzky and
Nicholson T. Collier and
Ketan Maheshwari and
Jonathan Ozik and
Matteo Turilli and
Andreas Wilke and
Justin M. Wozniak and
Kyle Chard and
Ian T. Foster and
Rafael Ferreira da Silva and
Shantenu Jha and
Daniel E. Laney},
title = {{PSI/J:} {A} Portable Interface for Submitting, Monitoring, and Managing
Jobs},
booktitle = {19th {IEEE} International Conference on e-Science, e-Science 2023,
Limassol, Cyprus, October 9-13, 2023},
pages = {1--10},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/e-Science58273.2023.10254912},
doi = {10.1109/E-SCIENCE58273.2023.10254912},
timestamp = {Fri, 29 Sep 2023 13:35:31 +0200},
biburl = {https://dblp.org/rec/conf/eScience/HateganMarandiucMCMOTWWCFSJL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/NicolaeIRDASTTWKJP23,
author = {Bogdan Nicolae and
Tanzima Z. Islam and
Robert B. Ross and
Huub J. J. Van Dam and
Kevin Assogba and
Polina Shpilker and
Mikhail Titov and
Matteo Turilli and
Tianle Wang and
Ozgur O. Kilic and
Shantenu Jha and
Line C. Pouchard},
title = {Building the {I} (Interoperability) of {FAIR} for Performance Reproducibility
of Large-Scale Composable Workflows in {RECUP}},
booktitle = {19th {IEEE} International Conference on e-Science, e-Science 2023,
Limassol, Cyprus, October 9-13, 2023},
pages = {1--7},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/e-Science58273.2023.10254808},
doi = {10.1109/E-SCIENCE58273.2023.10254808},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/NicolaeIRDASTTWKJP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/WangSKGPJ23,
author = {Tianle Wang and
Sudip K. Seal and
Ramakrishnan Kannan and
Cristina Garcia{-}Cardona and
Thomas Proffen and
Shantenu Jha},
title = {A Parallel Machine Learning Workflow for Neutron Scattering Data Analysis},
booktitle = {{IEEE} International Parallel and Distributed Processing Symposium,
{IPDPS} 2023 - Workshops, St. Petersburg, FL, USA, May 15-19, 2023},
pages = {795--798},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/IPDPSW59300.2023.00133},
doi = {10.1109/IPDPSW59300.2023.00133},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/WangSKGPJ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jsspp/PascuzziKTJ23,
author = {Vincent R. Pascuzzi and
Ozgur O. Kilic and
Matteo Turilli and
Shantenu Jha},
editor = {Dalibor Klus{\'{a}}cek and
Julita Corbal{\'{a}}n and
Gonzalo P. Rodrigo},
title = {Asynchronous Execution of Heterogeneous Tasks in ML-Driven {HPC} Workflows},
booktitle = {Job Scheduling Strategies for Parallel Processing - 26th Workshop,
{JSSPP} 2023, St. Petersburg, FL, USA, May 19, 2023, Revised Selected
Papers},
series = {Lecture Notes in Computer Science},
volume = {14283},
pages = {27--45},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-43943-8\_2},
doi = {10.1007/978-3-031-43943-8\_2},
timestamp = {Sun, 24 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/jsspp/PascuzziKTJ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/qsw/SaurabhJL23,
author = {Nishant Saurabh and
Shantenu Jha and
Andr{\'{e}} Luckow},
editor = {Shaukat Ali and
Claudio Agostino Ardagna and
Nimanthi L. Atukorala and
Johanna Barzen and
Carl K. Chang and
Rong N. Chang and
Jing Fan and
Ismael Faro and
Sebastian Feld and
Geoffrey Fox and
Zhi Jin and
Frank Leymann and
Florian Neukart and
Salvador de la Puente and
Manuel Wimmer},
title = {A Conceptual Architecture for a Quantum-HPC Middleware},
booktitle = {{IEEE} International Conference on Quantum Software, {QSW} 2023, Chicago,
IL, USA, July 2-8, 2023},
pages = {116--127},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/QSW59989.2023.00023},
doi = {10.1109/QSW59989.2023.00023},
timestamp = {Thu, 14 Sep 2023 15:14:46 +0200},
biburl = {https://dblp.org/rec/conf/qsw/SaurabhJL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/BaderBBBCCCCDDF23,
author = {Jonathan Bader and
Jim Belak and
Matthew T. Bement and
Matthew Berry and
Robert Carson and
Daniela Cassol and
Stephen Chan and
John Coleman and
Kastan Day and
Alejandro Duque and
Kjiersten Fagnan and
Jeff Froula and
Shantenu Jha and
Daniel S. Katz and
Piotr Kica and
Volodymyr V. Kindratenko and
Edward Kirton and
Ramani Kothadia and
Daniel E. Laney and
Fabian Lehmann and
Ulf Leser and
Sabina Licholai and
Maciej Malawski and
Mario Melara and
Elais Player Jackson and
Matthew Rolchigo and
Setareh Sarrafan and
Seung{-}Jin Sul and
Abdullah Syed and
Lauritz Thamsen and
Mikhail Titov and
Matteo Turilli and
Silvina Ca{\'{\i}}no{-}Lores and
Anirban Mandal},
title = {Novel Approaches Toward Scalable Composable Workflows in Hyper-Heterogeneous
Computing Environments},
booktitle = {Proceedings of the {SC} '23 Workshops of The International Conference
on High Performance Computing, Network, Storage, and Analysis, {SC-W}
2023, Denver, CO, USA, November 12-17, 2023},
pages = {2097--2108},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3624062.3626283},
doi = {10.1145/3624062.3626283},
timestamp = {Tue, 28 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/BaderBBBCCCCDDF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2304-00019,
author = {Rafael Ferreira da Silva and
Rosa M. Badia and
Venkat Bala and
Debbie Bard and
Peer{-}Timo Bremer and
Ian Buckley and
Silvina Ca{\'{\i}}no{-}Lores and
Kyle Chard and
Carole A. Goble and
Shantenu Jha and
Daniel S. Katz and
Daniel E. Laney and
Manish Parashar and
Fr{\'{e}}d{\'{e}}ric Suter and
Nick Tyler and
Thomas D. Uram and
Ilkay Altintas and
Stefan Andersson and
William Arndt and
Juan Aznar and
Jonathan Bader and
Bartosz Balis and
Chris Blanton and
Kelly Rosa Braghetto and
Aharon Brodutch and
Paul Brunk and
Henri Casanova and
Alba Cervera{-}Lierta and
Justin Chigu and
Tain{\~{a}} Coleman and
Nick Collier and
Iacopo Colonnelli and
Frederik Coppens and
Michael R. Crusoe and
Will Cunningham and
Bruno de Paula Kinoshita and
Paolo Di Tommaso and
Charles M. Doutriaux and
Matthew Downton and
Wael R. Elwasif and
Bjoern Enders and
Chris Erdmann and
Thomas Fahringer and
Ludmilla Figueiredo and
Rosa Filgueira and
Martin Foltin and
Anne Fouilloux and
Luiz Gadelha and
Andy Gallo and
Artur Garc{\'{\i}}a{-}S{\'{a}}ez and
et al.},
title = {Workflows Community Summit 2022: {A} Roadmap Revolution},
journal = {CoRR},
volume = {abs/2304.00019},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2304.00019},
doi = {10.48550/ARXIV.2304.00019},
eprinttype = {arXiv},
eprint = {2304.00019},
timestamp = {Sun, 20 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2304-00019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2307-07895,
author = {Mihael Hategan{-}Marandiuc and
Andr{\'{e}} Merzky and
Nicholson T. Collier and
Ketan Maheshwari and
Jonathan Ozik and
Matteo Turilli and
Andreas Wilke and
Justin M. Wozniak and
Kyle Chard and
Ian T. Foster and
Rafael Ferreira da Silva and
Shantenu Jha and
Daniel E. Laney},
title = {{PSI/J:} {A} Portable Interface for Submitting, Monitoring, and Managing
Jobs},
journal = {CoRR},
volume = {abs/2307.07895},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2307.07895},
doi = {10.48550/ARXIV.2307.07895},
eprinttype = {arXiv},
eprint = {2307.07895},
timestamp = {Sun, 20 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2307-07895.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2308-06608,
author = {Nishant Saurabh and
Shantenu Jha and
Andr{\'{e}} Luckow},
title = {A Conceptual Architecture for a Quantum-HPC Middleware},
journal = {CoRR},
volume = {abs/2308.06608},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2308.06608},
doi = {10.48550/ARXIV.2308.06608},
eprinttype = {arXiv},
eprint = {2308.06608},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2308-06608.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/ClydeGKMBBBBCCC22,
author = {Austin Clyde and
Stephanie Galanie and
Daniel W. Kneller and
Heng Ma and
Yadu N. Babuji and
Ben Blaiszik and
Alexander Brace and
Thomas S. Brettin and
Kyle Chard and
Ryan Chard and
Leighton Coates and
Ian T. Foster and
Darin Hauner and
Vilmos Kertesz and
Neeraj Kumar and
Hyungro Lee and
Zhuozhao Li and
Andr{\'{e}} Merzky and
Jurgen G. Schmidt and
Li Tan and
Mikhail Titov and
Anda Trifan and
Matteo Turilli and
Hubertus Van Dam and
Srinivas C. Chennubhotla and
Shantenu Jha and
Andrey Kovalevsky and
Arvind Ramanathan and
Martha S. Head and
Rick Stevens},
title = {High-Throughput Virtual Screening and Validation of a SARS-CoV-2 Main
Protease Noncovalent Inhibitor},
journal = {J. Chem. Inf. Model.},
volume = {62},
number = {1},
pages = {116--128},
year = {2022},
url = {https://doi.org/10.1021/acs.jcim.1c00851},
doi = {10.1021/ACS.JCIM.1C00851},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/ClydeGKMBBBBCCC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tpds/MerzkyTTSJ22,
author = {Andr{\'{e}} Merzky and
Matteo Turilli and
Mikhail Titov and
Aymen Al{-}Saadi and
Shantenu Jha},
title = {Design and Performance Characterization of RADICAL-Pilot on Leadership-Class
Platforms},
journal = {{IEEE} Trans. Parallel Distributed Syst.},
volume = {33},
number = {4},
pages = {818--829},
year = {2022},
url = {https://doi.org/10.1109/TPDS.2021.3105994},
doi = {10.1109/TPDS.2021.3105994},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tpds/MerzkyTTSJ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/MerzkyTJ22,
author = {Andr{\'{e}} Merzky and
Matteo Turilli and
Shantenu Jha},
title = {{RAPTOR:} Ravenous Throughput Computing},
booktitle = {22nd {IEEE} International Symposium on Cluster, Cloud and Internet
Computing, CCGrid 2022, Taormina, Italy, May 16-19, 2022},
pages = {595--604},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/CCGrid54584.2022.00069},
doi = {10.1109/CCGRID54584.2022.00069},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ccgrid/MerzkyTJ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/RameshTTJM22,
author = {Srinivasan Ramesh and
Mikhail Titov and
Matteo Turilli and
Shantenu Jha and
Allen D. Malony},
title = {The Ghost of Performance Reproducibility Past},
booktitle = {18th {IEEE} International Conference on e-Science, e-Science 2022,
Salt Lake City, UT, USA, October 11-14, 2022},
pages = {513--518},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/eScience55777.2022.00091},
doi = {10.1109/ESCIENCE55777.2022.00091},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/RameshTTJM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/BraceYMTMFRLTJ22,
author = {Alexander Brace and
Igor Yakushin and
Heng Ma and
Anda Trifan and
Todd S. Munson and
Ian T. Foster and
Arvind Ramanathan and
Hyungro Lee and
Matteo Turilli and
Shantenu Jha},
title = {Coupling streaming {AI} and {HPC} ensembles to achieve 100-1000{\texttimes}
faster biomolecular simulations},
booktitle = {2022 {IEEE} International Parallel and Distributed Processing Symposium,
{IPDPS} 2022, Lyon, France, May 30 - June 3, 2022},
pages = {806--816},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/IPDPS53621.2022.00083},
doi = {10.1109/IPDPS53621.2022.00083},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ipps/BraceYMTMFRLTJ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jsspp/TitovTMNEJ22,
author = {Mikhail Titov and
Matteo Turilli and
Andr{\'{e}} Merzky and
Thomas J. Naughton and
Wael R. Elwasif and
Shantenu Jha},
editor = {Dalibor Klus{\'{a}}cek and
Julita Corbal{\'{a}}n and
Gonzalo P. Rodrigo},
title = {RADICAL-Pilot and PMIx/PRRTE: Executing Heterogeneous Workloads at
Large Scale on Partitioned {HPC} Resources},
booktitle = {Job Scheduling Strategies for Parallel Processing - 25th International
Workshop, {JSSPP} 2022, Virtual Event, June 3, 2022, Revised Selected
Papers},
series = {Lecture Notes in Computer Science},
volume = {13592},
pages = {88--107},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-22698-4\_5},
doi = {10.1007/978-3-031-22698-4\_5},
timestamp = {Tue, 31 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/jsspp/TitovTMNEJ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/works-ws/AlsaadiWMCFJT22,
author = {Aymen Alsaadi and
Logan T. Ward and
Andr{\'{e}} Merzky and
Kyle Chard and
Ian T. Foster and
Shantenu Jha and
Matteo Turilli},
title = {RADICAL-Pilot and Parsl: Executing Heterogeneous Workflows on {HPC}
Platforms},
booktitle = {{IEEE/ACM} Workshop on Workflows in Support of Large-Scale Science,
WORKS@SC 2022, Dallas, TX, USA, November 13-18, 2022},
pages = {27--34},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/WORKS56498.2022.00009},
doi = {10.1109/WORKS56498.2022.00009},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/works-ws/AlsaadiWMCFJT22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-06962,
author = {Weiming Hu and
Guido Cervone and
Matteo Turilli and
Andr{\'{e}} Merzky and
Shantenu Jha},
title = {A Scalable Solution for Running Ensemble Simulations for Photovoltaic
Energy},
journal = {CoRR},
volume = {abs/2201.06962},
year = {2022},
url = {https://arxiv.org/abs/2201.06962},
eprinttype = {arXiv},
eprint = {2201.06962},
timestamp = {Fri, 21 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2201-06962.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-07435,
author = {Rafael Ferreira da Silva and
Kyle Chard and
Henri Casanova and
Dan Laney and
Dong H. Ahn and
Shantenu Jha and
William E. Allcock and
Gregory Bauer and
Dmitry Duplyakin and
Bjoern Enders and
Todd M. Heer and
Eric Lancon and
Sergiu Sanielevici and
Kevin Sayers},
title = {Workflows Community Summit: Tightening the Integration between Computing
Facilities and Scientific Workflows},
journal = {CoRR},
volume = {abs/2201.07435},
year = {2022},
url = {https://arxiv.org/abs/2201.07435},
eprinttype = {arXiv},
eprint = {2201.07435},
timestamp = {Fri, 21 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2201-07435.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-11069,
author = {Vincent R. Pascuzzi and
Matteo Turilli and
Shantenu Jha},
title = {Asynchronous Execution of Heterogeneous Tasks in AI-coupled {HPC}
Workflows},
journal = {CoRR},
volume = {abs/2208.11069},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.11069},
doi = {10.48550/ARXIV.2208.11069},
eprinttype = {arXiv},
eprint = {2208.11069},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-11069.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-11745,
author = {Shantenu Jha and
Vincent R. Pascuzzi and
Matteo Turilli},
title = {AI-coupled {HPC} Workflows},
journal = {CoRR},
volume = {abs/2208.11745},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.11745},
doi = {10.48550/ARXIV.2208.11745},
eprinttype = {arXiv},
eprint = {2208.11745},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-11745.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-13102,
author = {Srinivasan Ramesh and
Mikhail Titov and
Matteo Turilli and
Shantenu Jha and
Allen D. Malony},
title = {The Ghost of Performance Reproducibility Past},
journal = {CoRR},
volume = {abs/2208.13102},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.13102},
doi = {10.48550/ARXIV.2208.13102},
eprinttype = {arXiv},
eprint = {2208.13102},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-13102.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-00114,
author = {Andr{\'{e}} Merzky and
Matteo Turilli and
Shantenu Jha},
title = {{RAPTOR:} Ravenous Throughput Computing},
journal = {CoRR},
volume = {abs/2209.00114},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2209.00114},
doi = {10.48550/ARXIV.2209.00114},
eprinttype = {arXiv},
eprint = {2209.00114},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2209-00114.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2210-08973,
author = {E. A. Huerta and
Ben Blaiszik and
L. Catherine Brinson and
Kristofer E. Bouchard and
Daniel Diaz and
Caterina Doglioni and
Javier M. Duarte and
Murali Emani and
Ian T. Foster and
Geoffrey C. Fox and
Philip C. Harris and
Lukas Heinrich and
Shantenu Jha and
Daniel S. Katz and
Volodymyr V. Kindratenko and
Christine R. Kirkpatrick and
Kati Lassila{-}Perini and
Ravi K. Madduri and
Mark S. Neubauer and
Fotis E. Psomopoulos and
Avik Roy and
Oliver R{\"{u}}bel and
Zhizhen Zhao and
Ruike Zhu},
title = {{FAIR} for {AI:} An interdisciplinary, international, inclusive, and
diverse community building perspective},
journal = {CoRR},
volume = {abs/2210.08973},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2210.08973},
doi = {10.48550/ARXIV.2210.08973},
eprinttype = {arXiv},
eprint = {2210.08973},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2210-08973.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fgcs/SaadiPGLJT21,
author = {Aymen Al{-}Saadi and
Ioannis Paraskevakos and
Bento Collares Gon{\c{c}}alves and
Heather J. Lynch and
Shantenu Jha and
Matteo Turilli},
title = {Comparing workflow application designs for high resolution satellite
image analysis},
journal = {Future Gener. Comput. Syst.},
volume = {124},
pages = {315--329},
year = {2021},
url = {https://doi.org/10.1016/j.future.2021.04.023},
doi = {10.1016/J.FUTURE.2021.04.023},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fgcs/SaadiPGLJT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhpca/CasalinoDGBSATB21,
author = {Lorenzo Casalino and
Abigail C. Dommer and
Zied Gaieb and
Em{\'{\i}}lia P. Barros and
Terra Sztain and
Surl{-}Hee Ahn and
Anda Trifan and
Alexander Brace and
Anthony T. Bogetti and
Austin Clyde and
Heng Ma and
Hyungro Lee and
Matteo Turilli and
Syma Khalid and
Lillian T. Chong and
Carlos Simmerling and
David J. Hardy and
Julio D. C. Maia and
James C. Phillips and
Thorsten Kurth and
Abraham C. Stern and
Lei Huang and
John D. McCalpin and
Mahidhar Tatineni and
Tom Gibbs and
John E. Stone and
Shantenu Jha and
Arvind Ramanathan and
Rommie E. Amaro},
title = {AI-driven multiscale simulations illuminate mechanisms of SARS-CoV-2
spike dynamics},
journal = {Int. J. High Perform. Comput. Appl.},
volume = {35},
number = {5},
year = {2021},
url = {https://doi.org/10.1177/10943420211006452},
doi = {10.1177/10943420211006452},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijhpca/CasalinoDGBSATB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhpca/AlexanderABBCCC21,
author = {Francis J. Alexander and
James A. Ang and
Jenna A. Bilbrey and
Jan Balewski and
Tiernan Casey and
Ryan Chard and
Jong Choi and
Sutanay Choudhury and
Bert J. Debusschere and
Anthony M. DeGennaro and
Nikoli Dryden and
J. Austin Ellis and
Ian T. Foster and
Cristina Garcia{-}Cardona and
Sayan Ghosh and
Peter Harrington and
Yunzhi Huang and
Shantenu Jha and
Travis Johnston and
Ai Kagawa and
Ramakrishnan Kannan and
Neeraj Kumar and
Zhengchun Liu and
Naoya Maruyama and
Satoshi Matsuoka and
Erin McCarthy and
Jamaludin Mohd{-}Yusof and
Peter Nugent and
Yosuke Oyama and
Thomas Proffen and
David Pugmire and
Sivasankaran Rajamanickam and
Vinay Ramakrishniah and
Malachi Schram and
Sudip K. Seal and
Ganesh Sivaraman and
Christine Sweeney and
Li Tan and
Rajeev Thakur and
Brian Van Essen and
Logan T. Ward and
Paul M. Welch and
Michael Wolf and
Sotiris S. Xantheas and
Kevin G. Yager and
Shinjae Yoo and
Byung{-}Jun Yoon},
title = {Co-design Center for Exascale Machine Learning Technologies (ExaLearn)},
journal = {Int. J. High Perform. Comput. Appl.},
volume = {35},
number = {6},
pages = {598--616},
year = {2021},
url = {https://doi.org/10.1177/10943420211029302},
doi = {10.1177/10943420211029302},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijhpca/AlexanderABBCCC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cluster/JhaM21,
author = {Shantenu Jha and
Allen D. Malony},
title = {Dynamic and Adaptive Monitoring and Analysis for Many-task Ensemble
Computing},
booktitle = {{IEEE} International Conference on Cluster Computing, {CLUSTER} 2021,
Portland, OR, USA, September 7-10, 2021},
pages = {637--641},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/Cluster48925.2021.00095},
doi = {10.1109/CLUSTER48925.2021.00095},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cluster/JhaM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icfec/LuckowRJ21,
author = {Andr{\'{e}} Luckow and
Kartik Rattan and
Shantenu Jha},
editor = {Yogesh L. Simmhan and
Blesson Varghese and
Lena Mashayekhy and
Rajkumar Buyya and
Omer F. Rana},
title = {Exploring Task Placement for Edge-to-Cloud Applications using Emulation},
booktitle = {5th {IEEE} International Conference on Fog and Edge Computing, {ICFEC}
2021, Virtual Event, May 10-13, 2021},
pages = {79--83},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/ICFEC51620.2021.00019},
doi = {10.1109/ICFEC51620.2021.00019},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icfec/LuckowRJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpp/SaadiABBBBBCCCC21,
author = {Aymen Al Saadi and
Dario Alf{\`{e}} and
Yadu N. Babuji and
Agastya Bhati and
Ben Blaiszik and
Alexander Brace and
Thomas S. Brettin and
Kyle Chard and
Ryan Chard and
Austin Clyde and
Peter V. Coveney and
Ian T. Foster and
Tom Gibbs and
Shantenu Jha and
Kristopher Keipert and
Dieter Kranzlm{\"{u}}ller and
Thorsten Kurth and
Hyungro Lee and
Zhuozhao Li and
Heng Ma and
Gerald Mathias and
Andr{\'{e}} Merzky and
Alexander Partin and
Arvind Ramanathan and
Ashka Shah and
Abraham C. Stern and
Rick Stevens and
Li Tan and
Mikhail Titov and
Anda Trifan and
Aristeidis Tsaris and
Matteo Turilli and
Huub J. J. Van Dam and
Shunzhou Wan and
David Wifling and
Junqi Yin},
editor = {Xian{-}He Sun and
Sameer Shende and
Laxmikant V. Kal{\'{e}} and
Yong Chen},
title = {{IMPECCABLE:} Integrated Modeling PipelinE for {COVID} Cure by Assessing
Better LEads},
booktitle = {{ICPP} 2021: 50th International Conference on Parallel Processing,
Lemont, IL, USA, August 9 - 12, 2021},
pages = {40:1--40:12},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3472456.3473524},
doi = {10.1145/3472456.3473524},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icpp/SaadiABBBBBCCCC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/LuckowRJ21,
author = {Andr{\'{e}} Luckow and
Kartik Rattan and
Shantenu Jha},
title = {Pilot-Edge: Distributed Resource Management Along the Edge-to-Cloud
Continuum},
booktitle = {{IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPS} Workshops 2021, Portland, OR, USA, June 17-21,
2021},
pages = {874--878},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/IPDPSW52791.2021.00130},
doi = {10.1109/IPDPSW52791.2021.00130},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/LuckowRJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/LeeMTTTABBCCMRS21,
author = {Hyungro Lee and
Andr{\'{e}} Merzky and
Li Tan and
Mikhail Titov and
Matteo Turilli and
Dario Alf{\`{e}} and
Agastya Bhati and
Alex Brace and
Austin Clyde and
Peter V. Coveney and
Heng Ma and
Arvind Ramanathan and
Rick Stevens and
Anda Trifan and
Hubertus Van Dam and
Shunzhou Wan and
Sean R. Wilkinson and
Shantenu Jha},
editor = {Timothy Robinson},
title = {Scalable {HPC} {\&} {AI} infrastructure for {COVID-19} therapeutics},
booktitle = {{PASC} '21: Platform for Advanced Scientific Computing Conference,
Geneva, Switzerland, July 5-9, 2021},
pages = {2:1--2:13},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3468267.3470573},
doi = {10.1145/3468267.3470573},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/pasc/LeeMTTTABBCCMRS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/works-ws/Al-SaadiABCCHHJ21,
author = {Aymen Al{-}Saadi and
Dong H. Ahn and
Yadu N. Babuji and
Kyle Chard and
James Corbett and
Mihael Hategan and
Stephen Herbein and
Shantenu Jha and
Daniel E. Laney and
Andr{\'{e}} Merzky and
Todd S. Munson and
Michael Salim and
Mikhail Titov and
Matteo Turilli and
Thomas D. Uram and
Justin M. Wozniak},
title = {ExaWorks: Workflows for Exascale},
booktitle = {2021 {IEEE} Workshop on Workflows in Support of Large-Scale Science
(WORKS), St. Louis, MO, USA, November 15, 2021},
pages = {50--57},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/WORKS54523.2021.00012},
doi = {10.1109/WORKS54523.2021.00012},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/works-ws/Al-SaadiABCCHHJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/works-ws/SilvaCCABBCCNEF21,
author = {Rafael Ferreira da Silva and
Henri Casanova and
Kyle Chard and
Ilkay Altintas and
Rosa M. Badia and
Bartosz Balis and
Tain{\~{a}} Coleman and
Frederik Coppens and
Frank Di Natale and
Bjoern Enders and
Thomas Fahringer and
Rosa Filgueira and
Grigori Fursin and
Daniel Garijo and
Carole A. Goble and
Dorran Howell and
Shantenu Jha and
Daniel S. Katz and
Daniel E. Laney and
Ulf Leser and
Maciej Malawski and
Kshitij Mehta and
Lo{\"{\i}}c Pottier and
Jonathan Ozik and
J. Luc Peterson and
Lavanya Ramakrishnan and
Stian Soiland{-}Reyes and
Douglas Thain and
Matthew Wolf},
title = {A Community Roadmap for Scientific Workflows Research and Development},
booktitle = {2021 {IEEE} Workshop on Workflows in Support of Large-Scale Science
(WORKS), St. Louis, MO, USA, November 15, 2021},
pages = {81--90},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/WORKS54523.2021.00016},
doi = {10.1109/WORKS54523.2021.00016},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/works-ws/SilvaCCABBCCNEF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2103-00091,
author = {Andr{\'{e}} Merzky and
Matteo Turilli and
Mikhail Titov and
Aymen Al{-}Saadi and
Shantenu Jha},
title = {Design and Performance Characterization of RADICAL-Pilot on Leadership-class
Platforms},
journal = {CoRR},
volume = {abs/2103.00091},
year = {2021},
url = {https://arxiv.org/abs/2103.00091},
eprinttype = {arXiv},
eprint = {2103.00091},
timestamp = {Wed, 05 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2103-00091.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2103-02843,
author = {Agastya P. Bhati and
Shunzhou Wan and
Dario Alf{\`{e}} and
Austin R. Clyde and
Mathis Bode and
Li Tan and
Mikhail Titov and
Andr{\'{e}} Merzky and
Matteo Turilli and
Shantenu Jha and
Roger R. Highfield and
Walter Rocchia and
Nicola Scafuri and
Sauro Succi and
Dieter Kranzlm{\"{u}}ller and
Gerald Mathias and
David Wifling and
Yann Donon and
Alberto Di Meglio and
Sofia Vallecorsa and
Heng Ma and
Anda Trifan and
Arvind Ramanathan and
Tom Brettin and
Alexander Partin and
Fangfang Xia and
Xiaotan Duan and
Rick Stevens and
Peter V. Coveney},
title = {Pandemic Drugs at Pandemic Speed: Accelerating {COVID-19} Drug Discovery
with Hybrid Machine Learning- and Physics-based Simulations on High
Performance Computers},
journal = {CoRR},
volume = {abs/2103.02843},
year = {2021},
url = {https://arxiv.org/abs/2103.02843},
eprinttype = {arXiv},
eprint = {2103.02843},
timestamp = {Mon, 15 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2103-02843.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2103-09181,
author = {Rafael Ferreira da Silva and
Henri Casanova and
Kyle Chard and
Dan Laney and
Dong H. Ahn and
Shantenu Jha and
Carole A. Goble and
Lavanya Ramakrishnan and
J. Luc Peterson and
Bjoern Enders and
Douglas Thain and
Ilkay Altintas and
Yadu N. Babuji and
Rosa M. Badia and
Vivien Bonazzi and
Tain{\~{a}} Coleman and
Michael R. Crusoe and
Ewa Deelman and
Frank Di Natale and
Paolo Di Tommaso and
Thomas Fahringer and
Rosa Filgueira and
Grigori Fursin and
Alex Ganose and
Bj{\"{o}}rn A. Gr{\"{u}}ning and
Daniel S. Katz and
Olga A. Kuchar and
Ana Kupresanin and
Bertram Lud{\"{a}}scher and
Ketan Maheshwari and
Marta Mattoso and
Kshitij Mehta and
Todd S. Munson and
Jonathan Ozik and
Tom Peterka and
Loic Pottier and
Tim Randles and
Stian Soiland{-}Reyes and
Benjam{\'{\i}}n Tovar and
Matteo Turilli and
Thomas D. Uram and
Karan Vahi and
Michael Wilde and
Matthew Wolf and
Justin M. Wozniak},
title = {Workflows Community Summit: Bringing the Scientific Workflows Community
Together},
journal = {CoRR},
volume = {abs/2103.09181},
year = {2021},
url = {https://arxiv.org/abs/2103.09181},
eprinttype = {arXiv},
eprint = {2103.09181},
timestamp = {Tue, 03 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2103-09181.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2104-03368,
author = {Andr{\'{e}} Luckow and
Kartik Rattan and
Shantenu Jha},
title = {Exploring Task Placement for Edge-to-Cloud Applications using Emulation},
journal = {CoRR},
volume = {abs/2104.03368},
year = {2021},
url = {https://arxiv.org/abs/2104.03368},
eprinttype = {arXiv},
eprint = {2104.03368},
timestamp = {Tue, 13 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2104-03368.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2104-03374,
author = {Andr{\'{e}} Luckow and
Kartik Rattan and
Shantenu Jha},
title = {Pilot-Edge: Distributed Resource Management Along the Edge-to-Cloud
Continuum},
journal = {CoRR},
volume = {abs/2104.03374},
year = {2021},
url = {https://arxiv.org/abs/2104.03374},
eprinttype = {arXiv},
eprint = {2104.03374},
timestamp = {Tue, 13 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2104-03374.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2104-04797,
author = {Alexander Brace and
Hyungro Lee and
Heng Ma and
Anda Trifan and
Matteo Turilli and
Igor Yakushin and
Todd S. Munson and
Ian T. Foster and
Shantenu Jha and
Arvind Ramanathan},
title = {Achieving 100X faster simulations of complex biological phenomena
by coupling {ML} to {HPC} ensembles},
journal = {CoRR},
volume = {abs/2104.04797},
year = {2021},
url = {https://arxiv.org/abs/2104.04797},
eprinttype = {arXiv},
eprint = {2104.04797},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2104-04797.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2105-13185,
author = {Aymen Alsaadi and
Andr{\'{e}} Merzky and
Kyle Chard and
Shantenu Jha and
Matteo Turilli},
title = {RADICAL-Pilot and Parsl: Executing Heterogeneous Workflows on {HPC}
Platforms},
journal = {CoRR},
volume = {abs/2105.13185},
year = {2021},
url = {https://arxiv.org/abs/2105.13185},
eprinttype = {arXiv},
eprint = {2105.13185},
timestamp = {Wed, 05 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2105-13185.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-05177,
author = {Rafael Ferreira da Silva and
Henri Casanova and
Kyle Chard and
Tain{\~{a}} Coleman and
Dan Laney and
Dong H. Ahn and
Shantenu Jha and
Dorran Howell and
Stian Soiland{-}Reyes and
Ilkay Altintas and
Douglas Thain and
Rosa Filgueira and
Yadu N. Babuji and
Rosa M. Badia and
Bartosz Balis and
Silvina Ca{\'{\i}}no{-}Lores and
Scott Callaghan and
Frederik Coppens and
Michael R. Crusoe and
Kaushik De and
Frank Di Natale and
Tu Mai Anh Do and
Bjoern Enders and
Thomas Fahringer and
Anne Fouilloux and
Grigori Fursin and
Alban Gaignard and
Alex Ganose and
Daniel Garijo and
Sandra Gesing and
Carole A. Goble and
Adil Hasan and
Sebastiaan Huber and
Daniel S. Katz and
Ulf Leser and
Douglas Lowe and
Bertram Lud{\"{a}}scher and
Ketan Maheshwari and
Maciej Malawski and
Rajiv Mayani and
Kshitij Mehta and
Andr{\'{e}} Merzky and
Todd S. Munson and
Jonathan Ozik and
Lo{\"{\i}}c Pottier and
Sashko Ristov and
Mehdi Roozmeh and
Renan Souza and
Fr{\'{e}}d{\'{e}}ric Suter and
Benjam{\'{\i}}n Tovar and
Matteo Turilli and
Karan Vahi and
Alvaro Vidal{-}Torreira and
Wendy R. Whitcup and
Michael Wilde and
Alan R. Williams and
Matthew Wolf and
Justin M. Wozniak},
title = {Workflows Community Summit: Advancing the State-of-the-art of Scientific
Workflows Management Systems Research and Development},
journal = {CoRR},
volume = {abs/2106.05177},
year = {2021},
url = {https://arxiv.org/abs/2106.05177},
eprinttype = {arXiv},
eprint = {2106.05177},
timestamp = {Sun, 17 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2106-05177.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-07036,
author = {Austin Clyde and
Thomas S. Brettin and
Alexander Partin and
Hyun Seung Yoo and
Yadu N. Babuji and
Ben Blaiszik and
Andr{\'{e}} Merzky and
Matteo Turilli and
Shantenu Jha and
Arvind Ramanathan and
Rick Stevens},
title = {Protein-Ligand Docking Surrogate Models: {A} SARS-CoV-2 Benchmark
for Deep Learning Accelerated Virtual Screening},
journal = {CoRR},
volume = {abs/2106.07036},
year = {2021},
url = {https://arxiv.org/abs/2106.07036},
eprinttype = {arXiv},
eprint = {2106.07036},
timestamp = {Wed, 16 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2106-07036.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2108-13521,
author = {Aymen Al{-}Saadi and
Dong H. Ahn and
Yadu N. Babuji and
Kyle Chard and
James Corbett and
Mihael Hategan and
Stephen Herbein and
Shantenu Jha and
Daniel E. Laney and
Andr{\'{e}} Merzky and
Todd S. Munson and
Michael Salim and
Mikhail Titov and
Matteo Turilli and
Justin M. Wozniak},
title = {ExaWorks: Workflows for Exascale},
journal = {CoRR},
volume = {abs/2108.13521},
year = {2021},
url = {https://arxiv.org/abs/2108.13521},
eprinttype = {arXiv},
eprint = {2108.13521},
timestamp = {Sun, 20 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2108-13521.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2109-11683,
author = {Hyun{-}Myung Woo and
Xiaoning Qian and
Li Tan and
Shantenu Jha and
Francis J. Alexander and
Edward R. Dougherty and
Byung{-}Jun Yoon},
title = {Optimal Decision Making in High-Throughput Virtual Screening Pipelines},
journal = {CoRR},
volume = {abs/2109.11683},
year = {2021},
url = {https://arxiv.org/abs/2109.11683},
eprinttype = {arXiv},
eprint = {2109.11683},
timestamp = {Mon, 27 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2109-11683.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2110-02168,
author = {Rafael Ferreira da Silva and
Henri Casanova and
Kyle Chard and
Ilkay Altintas and
Rosa M. Badia and
Bartosz Balis and
Tain{\~{a}} Coleman and
Frederik Coppens and
Frank Di Natale and
Bjoern Enders and
Thomas Fahringer and
Rosa Filgueira and
Grigori Fursin and
Daniel Garijo and
Carole A. Goble and
Dorran Howell and
Shantenu Jha and
Daniel S. Katz and
Daniel E. Laney and
Ulf Leser and
Maciej Malawski and
Kshitij Mehta and
Lo{\"{\i}}c Pottier and
Jonathan Ozik and
J. Luc Peterson and
Lavanya Ramakrishnan and
Stian Soiland{-}Reyes and
Douglas Thain and
Matthew Wolf},
title = {A Community Roadmap for Scientific Workflows Research and Development},
journal = {CoRR},
volume = {abs/2110.02168},
year = {2021},
url = {https://arxiv.org/abs/2110.02168},
eprinttype = {arXiv},
eprint = {2110.02168},
timestamp = {Sun, 20 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2110-02168.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/KhoshlessanPFJB20,
author = {Mahzad Khoshlessan and
Ioannis Paraskevakos and
Geoffrey C. Fox and
Shantenu Jha and
Oliver Beckstein},
title = {Parallel performance of molecular dynamics trajectory analysis},
journal = {Concurr. Comput. Pract. Exp.},
volume = {32},
number = {19},
year = {2020},
url = {https://doi.org/10.1002/cpe.5789},
doi = {10.1002/CPE.5789},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/KhoshlessanPFJB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sncs/Balasubramanian20,
author = {Vivek Balasubramanian and
Travis Jensen and
Matteo Turilli and
Peter M. Kasson and
Michael R. Shirts and
Shantenu Jha},
title = {Adaptive Ensemble Biomolecular Applications at Scale},
journal = {{SN} Comput. Sci.},
volume = {1},
number = {2},
pages = {104},
year = {2020},
url = {https://doi.org/10.1007/s42979-020-0081-1},
doi = {10.1007/S42979-020-0081-1},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/sncs/Balasubramanian20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/LuckowJ20,
author = {Andr{\'{e}} Luckow and
Shantenu Jha},
title = {Methods and Experiences for Developing Abstractions for Data-intensive,
Scientific Applications},
booktitle = {2020 {IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPSW} 2020, New Orleans, LA, USA, May 18-22, 2020},
pages = {636--645},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/IPDPSW50202.2020.00106},
doi = {10.1109/IPDPSW50202.2020.00106},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/LuckowJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/xsede/SpitzbartLTJ20,
author = {Bradley D. Spitzbart and
Heather J. Lynch and
Matteo Turilli and
Shantenu Jha},
editor = {Gwen A. Jacobs and
Craig A. Stewart},
title = {{ICEBERG:} Imagery Cyber-infrastructure and Extensible Building blocks
to Enhance Research in the Geosciences. {(A} Research Programmer's
Perspective)},
booktitle = {{PEARC} '20: Practice and Experience in Advanced Research Computing,
Portland, OR, USA, July 27-31, 2020},
pages = {299--303},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3311790.3396640},
doi = {10.1145/3311790.3396640},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/xsede/SpitzbartLTJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-09009,
author = {Andr{\'{e}} Luckow and
Shantenu Jha},
title = {Methods and Experiences for Developing Abstractions for Data-intensive,
Scientific Applications},
journal = {CoRR},
volume = {abs/2002.09009},
year = {2020},
url = {https://arxiv.org/abs/2002.09009},
eprinttype = {arXiv},
eprint = {2002.09009},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2002-09009.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2006-02431,
author = {Yadu N. Babuji and
Ben Blaiszik and
Tom Brettin and
Kyle Chard and
Ryan Chard and
Austin Clyde and
Ian T. Foster and
Zhi Hong and
Shantenu Jha and
Zhuozhao Li and
Xuefeng Liu and
Arvind Ramanathan and
Yi Ren and
Nicholaus Saint and
Marcus Schwarting and
Rick Stevens and
Hubertus Van Dam and
Rick Wagner},
title = {Targeting SARS-CoV-2 with {AI-} and HPC-enabled Lead Generation: {A}
First Data Release},
journal = {CoRR},
volume = {abs/2006.02431},
year = {2020},
url = {https://arxiv.org/abs/2006.02431},
eprinttype = {arXiv},
eprint = {2006.02431},
timestamp = {Wed, 21 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2006-02431.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2010-06574,
author = {Aymen Al Saadi and
Dario Alf{\`{e}} and
Yadu N. Babuji and
Agastya Bhati and
Ben Blaiszik and
Thomas S. Brettin and
Kyle Chard and
Ryan Chard and
Peter V. Coveney and
Anda Trifan and
Alex Brace and
Austin Clyde and
Ian T. Foster and
Tom Gibbs and
Shantenu Jha and
Kristopher Keipert and
Thorsten Kurth and
Dieter Kranzlm{\"{u}}ller and
Hyungro Lee and
Zhuozhao Li and
Heng Ma and
Andr{\'{e}} Merzky and
Gerald Mathias and
Alexander Partin and
Junqi Yin and
Arvind Ramanathan and
Ashka Shah and
Abraham C. Stern and
Rick Stevens and
Li Tan and
Mikhail Titov and
Aristeidis Tsaris and
Matteo Turilli and
Huub J. J. Van Dam and
Shunzhou Wan and
David Wifling},
title = {{IMPECCABLE:} Integrated Modeling PipelinE for {COVID} Cure by Assessing
Better LEads},
journal = {CoRR},
volume = {abs/2010.06574},
year = {2020},
url = {https://arxiv.org/abs/2010.06574},
eprinttype = {arXiv},
eprint = {2010.06574},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2010-06574.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2010-10517,
author = {Hyungro Lee and
Andr{\'{e}} Merzky and
Li Tan and
Mikhail Titov and
Matteo Turilli and
Dario Alf{\`{e}} and
Agastya Bhati and
Alex Brace and
Austin Clyde and
Peter V. Coveney and
Heng Ma and
Arvind Ramanathan and
Rick Stevens and
Anda Trifan and
Hubertus Van Dam and
Shunzhou Wan and
Sean R. Wilkinson and
Shantenu Jha},
title = {Scalable {HPC} and {AI} Infrastructure for {COVID-19} Therapeutics},
journal = {CoRR},
volume = {abs/2010.10517},
year = {2020},
url = {https://arxiv.org/abs/2010.10517},
eprinttype = {arXiv},
eprint = {2010.10517},
timestamp = {Thu, 22 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2010-10517.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2010-14756,
author = {Aymen Al{-}Saadi and
Ioannis Paraskevakos and
Bento Collares Gon{\c{c}}alves and
Heather J. Lynch and
Shantenu Jha and
Matteo Turilli},
title = {Comparing Workflow Application Designs for High Resolution Satellite
Image Analysis},
journal = {CoRR},
volume = {abs/2010.14756},
year = {2020},
url = {https://arxiv.org/abs/2010.14756},
eprinttype = {arXiv},
eprint = {2010.14756},
timestamp = {Wed, 05 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2010-14756.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/csbs/HuertaHJNK19,
author = {E. A. Huerta and
Roland Haas and
Shantenu Jha and
Mark S. Neubauer and
Daniel S. Katz},
title = {Supporting High-Performance and High-Throughput Computing for Experimental
Science},
journal = {Comput. Softw. Big Sci.},
volume = {3},
number = {1},
year = {2019},
url = {https://doi.org/10.1007/s41781-019-0022-7},
doi = {10.1007/S41781-019-0022-7},
timestamp = {Wed, 24 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/csbs/HuertaHJNK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/JhaLNR19,
author = {Shantenu Jha and
Scott A. Lathrop and
Jarek Nabrzyski and
Lavanya Ramakrishnan},
title = {Incorporating Scientific Workflows in Computing Research Processes},
journal = {Comput. Sci. Eng.},
volume = {21},
number = {4},
pages = {4--6},
year = {2019},
url = {https://doi.org/10.1109/MCSE.2019.2917987},
doi = {10.1109/MCSE.2019.2917987},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cse/JhaLNR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/TurilliBMPJ19,
author = {Matteo Turilli and
Vivek Balasubramanian and
Andr{\'{e}} Merzky and
Ioannis Paraskevakos and
Shantenu Jha},
title = {Middleware Building Blocks for Workflow Systems},
journal = {Comput. Sci. Eng.},
volume = {21},
number = {4},
pages = {62--75},
year = {2019},
url = {https://doi.org/10.1109/MCSE.2019.2920048},
doi = {10.1109/MCSE.2019.2920048},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cse/TurilliBMPJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhpca/PouchardBEJRSTD19,
author = {Line Pouchard and
Sterling Baldwin and
Todd Elsethagen and
Shantenu Jha and
Bibi Raju and
Eric G. Stephan and
Li Tang and
Kerstin Kleese van Dam},
title = {Computational reproducibility of scientific workflows at extreme scales},
journal = {Int. J. High Perform. Comput. Appl.},
volume = {33},
number = {5},
year = {2019},
url = {https://doi.org/10.1177/1094342019839124},
doi = {10.1177/1094342019839124},
timestamp = {Sun, 17 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijhpca/PouchardBEJRSTD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bigdataconf/LuckowJ19,
author = {Andr{\'{e}} Luckow and
Shantenu Jha},
editor = {Chaitanya K. Baru and
Jun Huan and
Latifur Khan and
Xiaohua Hu and
Ronay Ak and
Yuanyuan Tian and
Roger S. Barga and
Carlo Zaniolo and
Kisung Lee and
Yanfang (Fanny) Ye},
title = {Performance Characterization and Modeling of Serverless and {HPC}
Streaming Applications},
booktitle = {2019 {IEEE} International Conference on Big Data {(IEEE} BigData),
Los Angeles, CA, USA, December 9-12, 2019},
pages = {5688--5696},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BigData47090.2019.9006530},
doi = {10.1109/BIGDATA47090.2019.9006530},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bigdataconf/LuckowJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/ParaskevakosTGL19,
author = {Ioannis Paraskevakos and
Matteo Turilli and
Bento Collares Gon{\c{c}}alves and
Heather J. Lynch and
Shantenu Jha},
title = {Workflow Design Analysis for High Resolution Satellite Image Analysis},
booktitle = {15th International Conference on eScience, eScience 2019, San Diego,
CA, USA, September 24-27, 2019},
pages = {47--56},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/eScience.2019.00013},
doi = {10.1109/ESCIENCE.2019.00013},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/ParaskevakosTGL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/JhaF19,
author = {Shantenu Jha and
Geoffrey C. Fox},
title = {Understanding {ML} Driven {HPC:} Applications and Infrastructure},
booktitle = {15th International Conference on eScience, eScience 2019, San Diego,
CA, USA, September 24-27, 2019},
pages = {421--427},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/eScience.2019.00054},
doi = {10.1109/ESCIENCE.2019.00054},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/JhaF19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/FoxJ19,
author = {Geoffrey C. Fox and
Shantenu Jha},
title = {Learning Everywhere: {A} Taxonomy for the Integration of Machine Learning
and Simulations},
booktitle = {15th International Conference on eScience, eScience 2019, San Diego,
CA, USA, September 24-27, 2019},
pages = {439--448},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/eScience.2019.00057},
doi = {10.1109/ESCIENCE.2019.00057},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/FoxJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/FoxGKJKQSSMACBJ19,
author = {Geoffrey C. Fox and
James A. Glazier and
J. C. S. Kadupitiya and
Vikram Jadhao and
Minje Kim and
Judy Qiu and
James P. Sluka and
Endre T. Somogyi and
Madhav V. Marathe and
Abhijin Adiga and
Jiangzhuo Chen and
Oliver Beckstein and
Shantenu Jha},
title = {Learning Everywhere: Pervasive Machine Learning for Effective High-Performance
Computation},
booktitle = {{IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPSW} 2019, Rio de Janeiro, Brazil, May 20-24, 2019},
pages = {422--429},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/IPDPSW.2019.00081},
doi = {10.1109/IPDPSW.2019.00081},
timestamp = {Fri, 22 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/FoxGKJKQSSMACBJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/parco/MaBLTYJR19,
author = {Heng Ma and
Debsindhu Bhowmik and
Hyungro Lee and
Matteo Turilli and
Michael T. Young and
Shantenu Jha and
Arvind Ramanathan},
editor = {Ian T. Foster and
Gerhard R. Joubert and
Ludek Kucera and
Wolfgang E. Nagel and
Frans J. Peters},
title = {Deep Generative Model Driven Protein Folding Simulations},
booktitle = {Parallel Computing: Technology Trends, Proceedings of the International
Conference on Parallel Computing, {PARCO} 2019, Prague, Czech Republic,
September 10-13, 2019},
series = {Advances in Parallel Computing},
volume = {36},
pages = {45--55},
publisher = {{IOS} Press},
year = {2019},
url = {https://doi.org/10.3233/APC200023},
doi = {10.3233/APC200023},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/parco/MaBLTYJR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/LeeTJBMR19,
author = {Hyungro Lee and
Matteo Turilli and
Shantenu Jha and
Debsindhu Bhowmik and
Heng Ma and
Arvind Ramanathan},
title = {DeepDriveMD: Deep-Learning Driven Adaptive Molecular Simulations for
Protein Folding},
booktitle = {Third {IEEE/ACM} Workshop on Deep Learning on Supercomputers, DLS@SC
2019, Denver, CO, USA, November 17, 2019},
pages = {12--19},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/DLS49591.2019.00007},
doi = {10.1109/DLS49591.2019.00007},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/LeeTJBMR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/TurilliMNEJ19,
author = {Matteo Turilli and
Andr{\'{e}} Merzky and
Thomas J. Naughton and
Wael R. Elwasif and
Shantenu Jha},
title = {Characterizing the Performance of Executing Many-tasks on Summit},
booktitle = {{IEEE/ACM} Third Annual Workshop on Emerging Parallel and Distributed
Runtime Systems and Middleware, IPDRM@SC 2019, Denver, CO, USA, November
22, 2019},
pages = {18--25},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/IPDRM49579.2019.00007},
doi = {10.1109/IPDRM49579.2019.00007},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/TurilliMNEJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1902-10810,
author = {Geoffrey C. Fox and
James A. Glazier and
J. C. S. Kadupitiya and
Vikram Jadhao and
Minje Kim and
Judy Qiu and
James P. Sluka and
Endre T. Somogyi and
Madhav V. Marathe and
Abhijin Adiga and
Jiangzhuo Chen and
Oliver Beckstein and
Shantenu Jha},
title = {Learning Everywhere: Pervasive Machine Learning for Effective High-Performance
Computation},
journal = {CoRR},
volume = {abs/1902.10810},
year = {2019},
url = {http://arxiv.org/abs/1902.10810},
eprinttype = {arXiv},
eprint = {1902.10810},
timestamp = {Thu, 07 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1902-10810.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1903-10057,
author = {Matteo Turilli and
Vivek Balasubramanian and
Andr{\'{e}} Merzky and
Ioannis Paraskevakos and
Shantenu Jha},
title = {Middleware Building Blocks for Workflow Systems},
journal = {CoRR},
volume = {abs/1903.10057},
year = {2019},
url = {http://arxiv.org/abs/1903.10057},
eprinttype = {arXiv},
eprint = {1903.10057},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1903-10057.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1904-03085,
author = {Vivek Balasubramanian and
Shantenu Jha and
Andr{\'{e}} Merzky and
Matteo Turilli},
title = {RADICAL-Cybertools: Middleware Building Blocks for Scalable Science},
journal = {CoRR},
volume = {abs/1904.03085},
year = {2019},
url = {http://arxiv.org/abs/1904.03085},
eprinttype = {arXiv},
eprint = {1904.03085},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1904-03085.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-09766,
author = {Ioannis Paraskevakos and
Matteo Turilli and
Bento Collares Gon{\c{c}}alves and
Heather J. Lynch and
Shantenu Jha},
title = {Workflow Design Analysis for High Resolution Satellite Image Analysis},
journal = {CoRR},
volume = {abs/1905.09766},
year = {2019},
url = {http://arxiv.org/abs/1905.09766},
eprinttype = {arXiv},
eprint = {1905.09766},
timestamp = {Fri, 23 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1905-09766.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-11863,
author = {Levi N. Naden and
Sam Ellis and
Shantenu Jha},
title = {MolSSI and BioExcel Workflow Workshop 2018 Report},
journal = {CoRR},
volume = {abs/1905.11863},
year = {2019},
url = {http://arxiv.org/abs/1905.11863},
eprinttype = {arXiv},
eprint = {1905.11863},
timestamp = {Mon, 03 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1905-11863.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1907-00097,
author = {Mahzad Khoshlessan and
Ioannis Paraskevakos and
Geoffrey C. Fox and
Shantenu Jha and
Oliver Beckstein},
title = {Parallel Performance of Molecular Dynamics Trajectory Analysis},
journal = {CoRR},
volume = {abs/1907.00097},
year = {2019},
url = {http://arxiv.org/abs/1907.00097},
eprinttype = {arXiv},
eprint = {1907.00097},
timestamp = {Mon, 08 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1907-00097.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1909-02363,
author = {Geoffrey C. Fox and
Shantenu Jha},
title = {Understanding {ML} driven {HPC:} Applications and Infrastructure},
journal = {CoRR},
volume = {abs/1909.02363},
year = {2019},
url = {http://arxiv.org/abs/1909.02363},
eprinttype = {arXiv},
eprint = {1909.02363},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1909-02363.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1909-03057,
author = {Matteo Turilli and
Andr{\'{e}} Merzky and
Thomas J. Naughton and
Wael R. Elwasif and
Shantenu Jha},
title = {Characterizing the Performance of Executing Many-tasks on Summit},
journal = {CoRR},
volume = {abs/1909.03057},
year = {2019},
url = {http://arxiv.org/abs/1909.03057},
eprinttype = {arXiv},
eprint = {1909.03057},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1909-03057.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1909-06055,
author = {Andr{\'{e}} Luckow and
Shantenu Jha},
title = {Performance Characterization and Modeling of Serverless and {HPC}
Streaming Applications},
journal = {CoRR},
volume = {abs/1909.06055},
year = {2019},
url = {http://arxiv.org/abs/1909.06055},
eprinttype = {arXiv},
eprint = {1909.06055},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1909-06055.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1909-07817,
author = {Hyungro Lee and
Heng Ma and
Matteo Turilli and
Debsindhu Bhowmik and
Shantenu Jha and
Arvind Ramanathan},
title = {DeepDriveMD: Deep-Learning Driven Adaptive Molecular Simulations for
Protein Folding},
journal = {CoRR},
volume = {abs/1909.07817},
year = {2019},
url = {http://arxiv.org/abs/1909.07817},
eprinttype = {arXiv},
eprint = {1909.07817},
timestamp = {Mon, 23 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1909-07817.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1909-13340,
author = {Geoffrey C. Fox and
Shantenu Jha},
title = {Learning Everywhere: {A} Taxonomy for the Integration of Machine Learning
and Simulations},
journal = {CoRR},
volume = {abs/1909.13340},
year = {2019},
url = {http://arxiv.org/abs/1909.13340},
eprinttype = {arXiv},
eprint = {1909.13340},
timestamp = {Wed, 02 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1909-13340.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DakkaTWZBWCJ18,
author = {Jumana Dakka and
Matteo Turilli and
David W. Wright and
Stefan J. Zasada and
Vivek Balasubramanian and
Shunzhou Wan and
Peter V. Coveney and
Shantenu Jha},
title = {High-throughput binding affinity calculations at extreme scales},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {18},
pages = {33--45},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2506-6},
doi = {10.1186/S12859-018-2506-6},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DakkaTWZBWCJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cce/SampatBBPCKJRI18,
author = {Chaitanya Sampat and
Franklin E. Bettencourt and
Yukteshwar Baranwal and
Ioannis Paraskevakos and
Anik Chaturbedi and
Subhodh Karkala and
Shantenu Jha and
Rohit Ramachandran and
Marianthi Ierapetritou},
title = {A parallel unidirectional coupled {DEM-PBM} model for the efficient
simulation of computationally intensive particulate process systems},
journal = {Comput. Chem. Eng.},
volume = {119},
pages = {128--142},
year = {2018},
url = {https://doi.org/10.1016/j.compchemeng.2018.08.006},
doi = {10.1016/J.COMPCHEMENG.2018.08.006},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cce/SampatBBPCKJRI18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/csur/TurilliSJ18,
author = {Matteo Turilli and
Mark Santcroos and
Shantenu Jha},
title = {A Comprehensive Perspective on Pilot-Job Systems},
journal = {{ACM} Comput. Surv.},
volume = {51},
number = {2},
pages = {43:1--43:32},
year = {2018},
url = {https://doi.org/10.1145/3177851},
doi = {10.1145/3177851},
timestamp = {Sat, 08 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/csur/TurilliSJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocs/MerzkyHTJ18,
author = {Andr{\'{e}} Merzky and
Ming Tai Ha and
Matteo Turilli and
Shantenu Jha},
title = {Synapse: Synthetic application profiler and emulator},
journal = {J. Comput. Sci.},
volume = {27},
pages = {329--344},
year = {2018},
url = {https://doi.org/10.1016/j.jocs.2018.06.012},
doi = {10.1016/J.JOCS.2018.06.012},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jocs/MerzkyHTJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/TurilliMBJ18,
author = {Matteo Turilli and
Andr{\'{e}} Merzky and
Vivek Balasubramanian and
Shantenu Jha},
editor = {Esam El{-}Araby and
Dhabaleswar K. Panda and
Sandra Gesing and
Amy W. Apon and
Volodymyr V. Kindratenko and
Massimo Cafaro and
Alfredo Cuzzocrea},
title = {Building Blocks for Workflow System Middleware},
booktitle = {18th {IEEE/ACM} International Symposium on Cluster, Cloud and Grid
Computing, {CCGRID} 2018, Washington, DC, USA, May 1-4, 2018},
pages = {348--349},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/CCGRID.2018.00051},
doi = {10.1109/CCGRID.2018.00051},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ccgrid/TurilliMBJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/DakkaFBTWWZCJ18,
author = {Jumana Dakka and
Kristof Farkas{-}Pall and
Vivek Balasubramanian and
Matteo Turilli and
Shunzhou Wan and
David W. Wright and
Stefan J. Zasada and
Peter V. Coveney and
Shantenu Jha},
editor = {Esam El{-}Araby and
Dhabaleswar K. Panda and
Sandra Gesing and
Amy W. Apon and
Volodymyr V. Kindratenko and
Massimo Cafaro and
Alfredo Cuzzocrea},
title = {Enabling Trade-offs Between Accuracy and Computational Cost: Adaptive
Algorithms to Reduce Time to Clinical Insight},
booktitle = {18th {IEEE/ACM} International Symposium on Cluster, Cloud and Grid
Computing, {CCGRID} 2018, Washington, DC, USA, May 1-4, 2018},
pages = {572--577},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/CCGRID.2018.00005},
doi = {10.1109/CCGRID.2018.00005},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ccgrid/DakkaFBTWWZCJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/ChantzialexiouL18,
author = {Georgios Chantzialexiou and
Andr{\'{e}} Luckow and
Shantenu Jha},
title = {Pilot-Streaming: {A} Stream Processing Framework for High-Performance
Computing},
booktitle = {14th {IEEE} International Conference on e-Science, e-Science 2018,
Amsterdam, The Netherlands, October 29 - November 1, 2018},
pages = {177--188},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/eScience.2018.00033},
doi = {10.1109/ESCIENCE.2018.00033},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/ChantzialexiouL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/DakkaFTWCJ18,
author = {Jumana Dakka and
Kristof Farkas{-}Pall and
Matteo Turilli and
David W. Wright and
Peter V. Coveney and
Shantenu Jha},
title = {Concurrent and Adaptive Extreme Scale Binding Free Energy Calculations},
booktitle = {14th {IEEE} International Conference on e-Science, e-Science 2018,
Amsterdam, The Netherlands, October 29 - November 1, 2018},
pages = {189--200},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/eScience.2018.00034},
doi = {10.1109/ESCIENCE.2018.00034},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/eScience/DakkaFTWCJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/PoydaTKWODOJ18,
author = {Alexey A. Poyda and
Mikhail Titov and
Alexei Klimentov and
Jack C. Wells and
Sarp H. Oral and
Kaushik De and
Danila Oleynik and
Shantenu Jha},
title = {Modeling Impact of Execution Strategies on Resource Utilization},
booktitle = {14th {IEEE} International Conference on e-Science, e-Science 2018,
Amsterdam, The Netherlands, October 29 - November 1, 2018},
pages = {340},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/eScience.2018.00085},
doi = {10.1109/ESCIENCE.2018.00085},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/PoydaTKWODOJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/AnanthrajDJKOOM18,
author = {V. Ananthraj and
Kaushik De and
Shantenu Jha and
Alexei Klimentov and
Danila Oleynik and
Sarp H. Oral and
Andr{\'{e}} Merzky and
Ruslan Mashinistov and
Sergey Panitkin and
P. Svirin and
Matteo Turilli and
Jack C. Wells and
Sean R. Wilkinson},
title = {Towards Exascale Computing for High Energy Physics: The {ATLAS} Experience
at {ORNL}},
booktitle = {14th {IEEE} International Conference on e-Science, e-Science 2018,
Amsterdam, The Netherlands, October 29 - November 1, 2018},
pages = {341--342},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/eScience.2018.00086},
doi = {10.1109/ESCIENCE.2018.00086},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/eScience/AnanthrajDJKOOM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpp/ParaskevakosLKC18,
author = {Ioannis Paraskevakos and
Andr{\'{e}} Luckow and
Mahzad Khoshlessan and
George Chantzialexiou and
Thomas E. Cheatham and
Oliver Beckstein and
Geoffrey C. Fox and
Shantenu Jha},
title = {Task-parallel Analysis of Molecular Dynamics Trajectories},
booktitle = {Proceedings of the 47th International Conference on Parallel Processing,
{ICPP} 2018, Eugene, OR, USA, August 13-16, 2018},
pages = {49:1--49:10},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3225058.3225128},
doi = {10.1145/3225058.3225128},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icpp/ParaskevakosLKC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/Balasubramanian18,
author = {Vivek Balasubramanian and
Matteo Turilli and
Weiming Hu and
Matthieu Lefebvre and
Wenjie Lei and
Ryan T. Modrak and
Guido Cervone and
Jeroen Tromp and
Shantenu Jha},
title = {Harnessing the Power of Many: Extensible Toolkit for Scalable Ensemble
Applications},
booktitle = {2018 {IEEE} International Parallel and Distributed Processing Symposium,
{IPDPS} 2018, Vancouver, BC, Canada, May 21-25, 2018},
pages = {536--545},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/IPDPS.2018.00063},
doi = {10.1109/IPDPS.2018.00063},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ipps/Balasubramanian18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jsspp/MerzkyTMSJ18,
author = {Andr{\'{e}} Merzky and
Matteo Turilli and
Manuel Maldonado and
Mark Santcroos and
Shantenu Jha},
editor = {Dalibor Klus{\'{a}}cek and
Walfredo Cirne and
Narayan Desai},
title = {Using Pilot Systems to Execute Many Task Workloads on Supercomputers},
booktitle = {Job Scheduling Strategies for Parallel Processing - 22nd International
Workshop, {JSSPP} 2018, Vancouver, BC, Canada, May 25, 2018, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {11332},
pages = {61--82},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-10632-4\_4},
doi = {10.1007/978-3-030-10632-4\_4},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/jsspp/MerzkyTMSJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-01174,
author = {Jumana Dakka and
Kristof Farkas{-}Pall and
Vivek Balasubramanian and
Matteo Turilli and
David W. Wright and
Shunzhou Wan and
Stefan J. Zasada and
Peter V. Coveney and
Shantenu Jha},
title = {Rapid, concurrent and adaptive extreme scale binding free energy calculation},
journal = {CoRR},
volume = {abs/1801.01174},
year = {2018},
url = {http://arxiv.org/abs/1801.01174},
eprinttype = {arXiv},
eprint = {1801.01174},
timestamp = {Mon, 07 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1801-01174.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-01843,
author = {Andr{\'{e}} Merzky and
Matteo Turilli and
Manuel Maldonado and
Shantenu Jha},
title = {Design and Performance Characterization of RADICAL-Pilot on Titan},
journal = {CoRR},
volume = {abs/1801.01843},
year = {2018},
url = {http://arxiv.org/abs/1801.01843},
eprinttype = {arXiv},
eprint = {1801.01843},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1801-01843.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-02651,
author = {Ming Tai Ha and
Matteo Turilli and
Andr{\'{e}} Merzky and
Shantenu Jha},
title = {Towards General Distributed Resource Selection},
journal = {CoRR},
volume = {abs/1801.02651},
year = {2018},
url = {http://arxiv.org/abs/1801.02651},
eprinttype = {arXiv},
eprint = {1801.02651},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1801-02651.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-07630,
author = {Ioannis Paraskevakos and
Andr{\'{e}} Luckow and
George Chantzialexiou and
Mahzad Khoshlessan and
Oliver Beckstein and
Geoffrey C. Fox and
Shantenu Jha},
title = {Task-parallel Analysis of Molecular Dynamics Trajectories},
journal = {CoRR},
volume = {abs/1801.07630},
year = {2018},
url = {http://arxiv.org/abs/1801.07630},
eprinttype = {arXiv},
eprint = {1801.07630},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1801-07630.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-08648,
author = {Andr{\'{e}} Luckow and
George Chantzialexiou and
Shantenu Jha},
title = {Pilot-Streaming: {A} Stream Processing Framework for High-Performance
Computing},
journal = {CoRR},
volume = {abs/1801.08648},
year = {2018},
url = {http://arxiv.org/abs/1801.08648},
eprinttype = {arXiv},
eprint = {1801.08648},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1801-08648.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1804-04736,
author = {Vivek Balasubramanian and
Travis Jensen and
Matteo Turilli and
Peter M. Kasson and
Michael R. Shirts and
Shantenu Jha},
title = {Implementing Adaptive Ensemble Biomolecular Applications at Scale},
journal = {CoRR},
volume = {abs/1804.04736},
year = {2018},
url = {http://arxiv.org/abs/1804.04736},
eprinttype = {arXiv},
eprint = {1804.04736},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1804-04736.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1805-00967,
author = {Line Pouchard and
Sterling Baldwin and
Todd Elsethagen and
Carlos Gamboa and
Shantenu Jha and
Bibi Raju and
Eric G. Stephan and
Li Tang and
Kerstin Kleese van Dam},
title = {Use Cases of Computational Reproducibility for Scientific Workflows
at Exascale},
journal = {CoRR},
volume = {abs/1805.00967},
year = {2018},
url = {http://arxiv.org/abs/1805.00967},
eprinttype = {arXiv},
eprint = {1805.00967},
timestamp = {Sun, 17 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1805-00967.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1808-00684,
author = {Andr{\'{e}} Merzky and
Ming Tai Ha and
Matteo Turilli and
Shantenu Jha},
title = {Synapse: Synthetic Application Profiler and Emulator},
journal = {CoRR},
volume = {abs/1808.00684},
year = {2018},
url = {http://arxiv.org/abs/1808.00684},
eprinttype = {arXiv},
eprint = {1808.00684},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1808-00684.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1810-03056,
author = {E. A. Huerta and
Roland Haas and
Shantenu Jha and
Mark S. Neubauer and
Daniel S. Katz},
title = {Supporting High-Performance and High-Throughput Computing for Experimental
Science},
journal = {CoRR},
volume = {abs/1810.03056},
year = {2018},
url = {http://arxiv.org/abs/1810.03056},
eprinttype = {arXiv},
eprint = {1810.03056},
timestamp = {Wed, 09 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1810-03056.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/MaassenWMBKBDMV17,
author = {Jason Maassen and
Ben van Werkhoven and
Maarten A. J. van Meersbergen and
Henri E. Bal and
Michael Kliphuis and
Sandra E. Brunnabend and
Henk A. Dijkstra and
Gerben van Malenstein and
Migiel de Vos and
Sylvia Kuijpers and
Sander Boele and
Jules Wolfrat and
Nick Hill and
David Wallom and
Christian Grimm and
Dieter Kranzlm{\"{u}}ller and
Dinesh Ganpathi and
Shantenu Jha and
Yaakoub El Khamra and
Frank O. Bryan and
Benjamin Kirtman and
Frank J. Seinstra},
title = {On the complexities of utilizing large-scale lightpath-connected distributed
cyberinfrastructure},
journal = {Concurr. Comput. Pract. Exp.},
volume = {29},
number = {2},
year = {2017},
url = {https://doi.org/10.1002/cpe.3853},
doi = {10.1002/CPE.3853},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/MaassenWMBKBDMV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/JhaKLHRS17,
author = {Shantenu Jha and
Daniel S. Katz and
Andr{\'{e}} Luckow and
Neil P. Chue Hong and
Omer F. Rana and
Yogesh Simmhan},
title = {Introducing distributed dynamic data-intensive {(D3)} science: Understanding
applications and infrastructure},
journal = {Concurr. Comput. Pract. Exp.},
volume = {29},
number = {8},
year = {2017},
url = {https://doi.org/10.1002/cpe.4032},
doi = {10.1002/CPE.4032},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/JhaKLHRS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/IEEEcloud/FoxJ17,
author = {Geoffrey C. Fox and
Shantenu Jha},
editor = {Geoffrey C. Fox},
title = {Conceptualizing a Computing Platform for Science Beyond 2020: To Cloudify
HPC, or HPCify Clouds?},
booktitle = {2017 {IEEE} 10th International Conference on Cloud Computing (CLOUD),
Honolulu, HI, USA, June 25-30, 2017},
pages = {808--810},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/CLOUD.2017.120},
doi = {10.1109/CLOUD.2017.120},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/IEEEcloud/FoxJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/TurilliBMHWKJ17,
author = {Matteo Turilli and
Yadu Nand Babuji and
Andr{\'{e}} Merzky and
Ming Tai Ha and
Michael Wilde and
Daniel S. Katz and
Shantenu Jha},
title = {Evaluating Distributed Execution of Workloads},
booktitle = {13th {IEEE} International Conference on e-Science, e-Science 2017,
Auckland, New Zealand, October 24-27, 2017},
pages = {276--285},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/eScience.2017.41},
doi = {10.1109/ESCIENCE.2017.41},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/TurilliBMHWKJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/OleynikPTAODKWJ17,
author = {Danila Oleynik and
Sergey Panitkin and
Matteo Turilli and
Alessio Angius and
Sarp H. Oral and
Kaushik De and
Alexei Klimentov and
Jack C. Wells and
Shantenu Jha},
title = {High-Throughput Computing on High-Performance Platforms: {A} Case
Study},
booktitle = {13th {IEEE} International Conference on e-Science, e-Science 2017,
Auckland, New Zealand, October 24-27, 2017},
pages = {295--304},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/eScience.2017.43},
doi = {10.1109/ESCIENCE.2017.43},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/OleynikPTAODKWJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/WyngaardLNPJ17,
author = {Jane Wyngaard and
Heather J. Lynch and
Jaroslaw Nabrzyski and
Allen Pope and
Shantenu Jha},
title = {Hacking at the Divide Between Polar Science and {HPC:} Using Hackathons
as Training Tools},
booktitle = {2017 {IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPS} Workshops 2017, Orlando / Buena Vista, FL, USA,
May 29 - June 2, 2017},
pages = {352--359},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/IPDPSW.2017.177},
doi = {10.1109/IPDPSW.2017.177},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/WyngaardLNPJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/scipy/KhoshlessanPJB17,
author = {Mahzad Khoshlessan and
Ioannis Paraskevakos and
Shantenu Jha and
Oliver Beckstein},
editor = {Katy Huff and
David Lippa and
Dillon Niederhut and
M Pacer},
title = {Parallel Analysis in MDAnalysis using the Dask Parallel Computing
Library},
booktitle = {Proceedings of the 16th Python in Science Conference 2017, SciPy 2017,
Austin, Texas, July 10 - July 16, 2017},
pages = {64--72},
publisher = {scipy.org},
year = {2017},
url = {https://doi.org/10.25080/shinma-7f4c6e7-00a},
doi = {10.25080/SHINMA-7F4C6E7-00A},
timestamp = {Thu, 16 Feb 2023 16:52:47 +0100},
biburl = {https://dblp.org/rec/conf/scipy/KhoshlessanPJB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/AngiusOPTDKOWJ17,
author = {Alessio Angius and
Danila Oleynik and
Sergey Panitkin and
Matteo Turilli and
Kaushik De and
Alexei Klimentov and
Sarp H. Oral and
Jack C. Wells and
Shantenu Jha},
title = {Converging High-Throughput and High-Performance Computing: {A} Case
Study},
journal = {CoRR},
volume = {abs/1704.00978},
year = {2017},
url = {http://arxiv.org/abs/1704.00978},
eprinttype = {arXiv},
eprint = {1704.00978},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/AngiusOPTDKOWJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1710-06774,
author = {Jay Jay Billings and
Shantenu Jha},
title = {Toward Common Components for Open Workflow Systems},
journal = {CoRR},
volume = {abs/1710.06774},
year = {2017},
url = {http://arxiv.org/abs/1710.06774},
eprinttype = {arXiv},
eprint = {1710.06774},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1710-06774.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1710-08491,
author = {Vivek Balasubramanian and
Matteo Turilli and
Weiming Hu and
Matthieu Lefebvre and
Wenjie Lei and
Guido Cervone and
Jeroen Tromp and
Shantenu Jha},
title = {Harnessing the Power of Many: Extensible Toolkit for Scalable Ensemble
Applications},
journal = {CoRR},
volume = {abs/1710.08491},
year = {2017},
url = {http://arxiv.org/abs/1710.08491},
eprinttype = {arXiv},
eprint = {1710.08491},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1710-08491.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1712-00512,
author = {Jumana Dakka and
Pouya Bashivan and
Mina Gheiratmand and
Irina Rish and
Shantenu Jha and
Russell Greiner},
title = {Learning Neural Markers of Schizophrenia Disorder Using Recurrent
Neural Networks},
journal = {CoRR},
volume = {abs/1712.00512},
year = {2017},
url = {http://arxiv.org/abs/1712.00512},
eprinttype = {arXiv},
eprint = {1712.00512},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1712-00512.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1712-09168,
author = {Jumana Dakka and
Matteo Turilli and
David W. Wright and
Stefan J. Zasada and
Vivek Balasubramanian and
Shunzhou Wan and
Peter V. Coveney and
Shantenu Jha},
title = {High-throughput Binding Affinity Calculations at Extreme Scales},
journal = {CoRR},
volume = {abs/1712.09168},
year = {2017},
url = {http://arxiv.org/abs/1712.09168},
eprinttype = {arXiv},
eprint = {1712.09168},
timestamp = {Mon, 07 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1712-09168.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fgcs/KatzMZJ16,
author = {Daniel S. Katz and
Andr{\'{e}} Merzky and
Zhao Zhang and
Shantenu Jha},
title = {Application skeletons: Construction and use in eScience},
journal = {Future Gener. Comput. Syst.},
volume = {59},
pages = {114--124},
year = {2016},
url = {https://doi.org/10.1016/j.future.2015.10.001},
doi = {10.1016/J.FUTURE.2015.10.001},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fgcs/KatzMZJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ZhangKMTJB16,
author = {Zhao Zhang and
Daniel S. Katz and
Andr{\'{e}} Merzky and
Matteo Turilli and
Shantenu Jha and
Yadu Nand Babuji},
title = {Application Skeleton: Generating Synthetic Applications for Infrastructure
Research},
journal = {J. Open Source Softw.},
volume = {1},
number = {1},
pages = {17},
year = {2016},
url = {https://doi.org/10.21105/joss.00017},
doi = {10.21105/JOSS.00017},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/ZhangKMTJB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/Balasubramanian16,
author = {Vivekanandan Balasubramanian and
Iain Bethune and
Ardita Shkurti and
Elena Breitmoser and
Eugen Hruska and
Cecilia Clementi and
Charles A. Laughton and
Shantenu Jha},
title = {ExTASY: Scalable and flexible coupling of {MD} simulations and advanced
sampling techniques},
booktitle = {12th {IEEE} International Conference on e-Science, e-Science 2016,
Baltimore, MD, USA, October 23-27, 2016},
pages = {361--370},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/eScience.2016.7870921},
doi = {10.1109/ESCIENCE.2016.7870921},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/Balasubramanian16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpp/Balasubramanian16,
author = {Vivekanandan Balasubramanian and
Antons Treikalis and
Ole Weidner and
Shantenu Jha},
title = {Ensemble Toolkit: Scalable and Flexible Execution of Ensembles of
Tasks},
booktitle = {45th International Conference on Parallel Processing, {ICPP} 2016,
Philadelphia, PA, USA, August 16-19, 2016},
pages = {458--463},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/ICPP.2016.59},
doi = {10.1109/ICPP.2016.59},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icpp/Balasubramanian16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpp/TreikalisMCLYJ16,
author = {Antons Treikalis and
Andr{\'{e}} Merzky and
Haoyuan Chen and
Tai{-}Sung Lee and
Darrin M. York and
Shantenu Jha},
title = {RepEx: {A} Flexible Framework for Scalable Replica Exchange Molecular
Dynamics Simulations},
booktitle = {45th International Conference on Parallel Processing, {ICPP} 2016,
Philadelphia, PA, USA, August 16-19, 2016},
pages = {628--637},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/ICPP.2016.78},
doi = {10.1109/ICPP.2016.78},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icpp/TreikalisMCLYJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/ShamsKMHJWK16,
author = {Shayan Shams and
Nayong Kim and
Xiandong Meng and
Ming Tai Ha and
Shantenu Jha and
Zhong Wang and
Joohyun Kim},
title = {A Scalable Pipeline for Transcriptome Profiling Tasks with On-Demand
Computing Clouds},
booktitle = {2016 {IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPS} Workshops 2016, Chicago, IL, USA, May 23-27, 2016},
pages = {443--452},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/IPDPSW.2016.129},
doi = {10.1109/IPDPSW.2016.129},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ipps/ShamsKMHJWK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/TurilliLZMWWKJ16,
author = {Matteo Turilli and
Feng Liu and
Zhao Zhang and
Andr{\'{e}} Merzky and
Michael Wilde and
Jon B. Weissman and
Daniel S. Katz and
Shantenu Jha},
title = {Integrating Abstractions to Enhance the Execution of Distributed Applications},
booktitle = {2016 {IEEE} International Parallel and Distributed Processing Symposium,
{IPDPS} 2016, Chicago, IL, USA, May 23-27, 2016},
pages = {953--962},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/IPDPS.2016.64},
doi = {10.1109/IPDPS.2016.64},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/TurilliLZMWWKJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/MerzkyJ16,
author = {Andr{\'{e}} Merzky and
Shantenu Jha},
title = {Synapse: Synthetic Application Profiler and Emulator},
booktitle = {2016 {IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPS} Workshops 2016, Chicago, IL, USA, May 23-27, 2016},
pages = {1259--1268},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/IPDPSW.2016.168},
doi = {10.1109/IPDPSW.2016.168},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/MerzkyJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/LuckowPCJ16,
author = {Andr{\'{e}} Luckow and
Ioannis Paraskevakos and
George Chantzialexiou and
Shantenu Jha},
title = {Hadoop on {HPC:} Integrating Hadoop and Pilot-Based Dynamic Resource
Management},
booktitle = {2016 {IEEE} International Parallel and Distributed Processing Symposium
Workshops, {IPDPS} Workshops 2016, Chicago, IL, USA, May 23-27, 2016},
pages = {1607--1616},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/IPDPSW.2016.166},
doi = {10.1109/IPDPSW.2016.166},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/LuckowPCJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/TreikalisMCLYJ16,
author = {Antons Treikalis and
Andr{\'{e}} Merzky and
Haoyuan Chen and
Tai{-}Sung Lee and
Darrin M. York and
Shantenu Jha},
title = {RepEx: {A} Flexible Framework for Scalable Replica Exchange Molecular
Dynamics Simulations},
journal = {CoRR},
volume = {abs/1601.05439},
year = {2016},
url = {http://arxiv.org/abs/1601.05439},
eprinttype = {arXiv},
eprint = {1601.05439},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/TreikalisMCLYJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/LuckowPCJ16,
author = {Andr{\'{e}} Luckow and
Ioannis Paraskevakos and
George Chantzialexiou and
Shantenu Jha},
title = {Hadoop on {HPC:} Integrating Hadoop and Pilot-based Dynamic Resource
Management},
journal = {CoRR},
volume = {abs/1602.00345},
year = {2016},
url = {http://arxiv.org/abs/1602.00345},
eprinttype = {arXiv},
eprint = {1602.00345},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/LuckowPCJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/Balasubramanian16,
author = {Vivekanandan Balasubramanian and
Antons Treikalis and
Ole Weidner and
Shantenu Jha},
title = {EnsembleMD Toolkit: Scalable and Flexible Execution of Ensembles of
Molecular Simulations},
journal = {CoRR},
volume = {abs/1602.00678},
year = {2016},
url = {http://arxiv.org/abs/1602.00678},
eprinttype = {arXiv},
eprint = {1602.00678},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/Balasubramanian16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/TurilliBMHWKJ16,
author = {Matteo Turilli and
Yadu Nand Babuji and
Andr{\'{e}} Merzky and
Ming Tai Ha and
Michael Wilde and
Daniel S. Katz and
Shantenu Jha},
title = {Analysis of Distributed Execution of Workloads},
journal = {CoRR},
volume = {abs/1605.09513},
year = {2016},
url = {http://arxiv.org/abs/1605.09513},
eprinttype = {arXiv},
eprint = {1605.09513},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/TurilliBMHWKJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/Balasubramanian16g,
author = {Vivekanandan Balasubramanian and
Iain Bethune and
Ardita Shkurti and
Elena Breitmoser and
Eugen Hruska and
Cecilia Clementi and
Charles A. Laughton and
Shantenu Jha},
title = {ExTASY: Scalable and Flexible Coupling of {MD} Simulations and Advanced
Sampling Techniques},
journal = {CoRR},
volume = {abs/1606.00093},
year = {2016},
url = {http://arxiv.org/abs/1606.00093},
eprinttype = {arXiv},
eprint = {1606.00093},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/Balasubramanian16g.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/JhaT16,
author = {Shantenu Jha and
Matteo Turilli},
title = {A Building Blocks Approach towards Domain Specific Workflow Systems?},
journal = {CoRR},
volume = {abs/1609.03484},
year = {2016},
url = {http://arxiv.org/abs/1609.03484},
eprinttype = {arXiv},
eprint = {1609.03484},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/JhaT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/JhaKLRSH16,
author = {Shantenu Jha and
Daniel S. Katz and
Andr{\'{e}} Luckow and
Omer F. Rana and
Yogesh Simmhan and
Neil P. Chue Hong},
title = {Introducing Distributed Dynamic Data-intensive {(D3)} Science: Understanding
Applications and Infrastructure},
journal = {CoRR},
volume = {abs/1609.03647},
year = {2016},
url = {http://arxiv.org/abs/1609.03647},
eprinttype = {arXiv},
eprint = {1609.03647},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/JhaKLRSH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jpdc/LuckowSZJ15,
author = {Andr{\'{e}} Luckow and
Mark Santcroos and
Ashley Zebrowski and
Shantenu Jha},
title = {Pilot-Data: An abstraction for distributed data},
journal = {J. Parallel Distributed Comput.},
volume = {79-80},
pages = {16--30},
year = {2015},
url = {https://doi.org/10.1016/j.jpdc.2014.09.009},
doi = {10.1016/J.JPDC.2014.09.009},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jpdc/LuckowSZJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/FoxQKJL15,
author = {Geoffrey C. Fox and
Judy Qiu and
Supun Kamburugamuve and
Shantenu Jha and
Andr{\'{e}} Luckow},
title = {{HPC-ABDS} High Performance Computing Enhanced Apache Big Data Stack},
booktitle = {15th {IEEE/ACM} International Symposium on Cluster, Cloud and Grid
Computing, CCGrid 2015, Shenzhen, China, May 4-7, 2015},
pages = {1057--1066},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/CCGrid.2015.122},
doi = {10.1109/CCGRID.2015.122},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccgrid/FoxQKJL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wbdb/FoxQJEK15,
author = {Geoffrey C. Fox and
Judy Qiu and
Shantenu Jha and
Saliya Ekanayake and
Supun Kamburugamuve},
editor = {Tilmann Rabl and
Raghunath Nambiar and
Chaitanya K. Baru and
Milind A. Bhandarkar and
Meikel Poess and
Saumyadipta Pyne},
title = {Big Data, Simulations and {HPC} Convergence},
booktitle = {Big Data Benchmarking - 6th International Workshop, {WBDB} 2015, Toronto,
ON, Canada, June 16-17, 2015 and 7th International Workshop, {WBDB}
2015, New Delhi, India, December 14-15, 2015, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {10044},
pages = {3--17},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-49748-8\_1},
doi = {10.1007/978-3-319-49748-8\_1},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wbdb/FoxQJEK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/hpdc/2015scream,
editor = {Shantenu Jha and
Daniel S. Katz and
Jon B. Weissman},
title = {Proceedings of the 1st Workshop on The Science of Cyberinfrastructure
- Research, Experience, Applications and Models, SCREAM@HPDC 2015,
Portland, Oregon, USA, June 16, 2015},
publisher = {{ACM}},
year = {2015},
url = {https://doi.org/10.1145/2753524},
doi = {10.1145/2753524},
isbn = {978-1-4503-3566-9},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpdc/2015scream.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/LuckowMJ15,
author = {Andr{\'{e}} Luckow and
Pradeep Kumar Mantha and
Shantenu Jha},
title = {Pilot-Abstraction: {A} Valid Abstraction for Data-Intensive Applications
on HPC, Hadoop and Cloud Infrastructures?},
journal = {CoRR},
volume = {abs/1501.05041},
year = {2015},
url = {http://arxiv.org/abs/1501.05041},
eprinttype = {arXiv},
eprint = {1501.05041},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/LuckowMJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/TurilliLZMWWKJ15,
author = {Matteo Turilli and
Feng Liu and
Zhao Zhang and
Andr{\'{e}} Merzky and
Michael Wilde and
Jon B. Weissman and
Daniel S. Katz and
Shantenu Jha},
title = {Integrating Abstractions to Enhance the Execution of Distributed Applications},
journal = {CoRR},
volume = {abs/1504.04720},
year = {2015},
url = {http://arxiv.org/abs/1504.04720},
eprinttype = {arXiv},
eprint = {1504.04720},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/TurilliLZMWWKJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/MerzkyJ15,
author = {Andr{\'{e}} Merzky and
Shantenu Jha},
title = {Synapse: Bridging the Gap Towards Predictable Workload Placement},
journal = {CoRR},
volume = {abs/1506.00272},
year = {2015},
url = {http://arxiv.org/abs/1506.00272},
eprinttype = {arXiv},
eprint = {1506.00272},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/MerzkyJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/TurilliSJ15,
author = {Matteo Turilli and
Mark Santcroos and
Shantenu Jha},
title = {A Comprehensive Perspective on the Pilot-Job Abstraction},
journal = {CoRR},
volume = {abs/1508.04180},
year = {2015},
url = {http://arxiv.org/abs/1508.04180},
eprinttype = {arXiv},
eprint = {1508.04180},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/TurilliSJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/MerzkySTJ15,
author = {Andr{\'{e}} Merzky and
Mark Santcroos and
Matteo Turilli and
Shantenu Jha},
title = {RADICAL-Pilot: Scalable Execution of Heterogeneous and Dynamic Workloads
on Supercomputers},
journal = {CoRR},
volume = {abs/1512.08194},
year = {2015},
url = {http://arxiv.org/abs/1512.08194},
eprinttype = {arXiv},
eprint = {1512.08194},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/MerzkySTJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/KimMJ14,
author = {Joohyun Kim and
Sharath Maddineni and
Shantenu Jha},
title = {Advancing next-generation sequencing data analytics with scalable
distributed infrastructure},
journal = {Concurr. Comput. Pract. Exp.},
volume = {26},
number = {4},
pages = {894--906},
year = {2014},
url = {https://doi.org/10.1002/cpe.3013},
doi = {10.1002/CPE.3013},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/KimMJ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/MartinJC14,
author = {Hugh S. C. Martin and
Shantenu Jha and
Peter V. Coveney},
title = {Comparative analysis of nucleotide translocation through protein nanopores
using steered molecular dynamics and an adaptive biasing force},
journal = {J. Comput. Chem.},
volume = {35},
number = {9},
pages = {692--702},
year = {2014},
url = {https://doi.org/10.1002/jcc.23525},
doi = {10.1002/JCC.23525},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcc/MartinJC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bigdata/JhaQLMF14,
author = {Shantenu Jha and
Judy Qiu and
Andr{\'{e}} Luckow and
Pradeep Kumar Mantha and
Geoffrey C. Fox},
title = {A Tale of Two Data-Intensive Paradigms: Applications, Abstractions,
and Architectures},
booktitle = {2014 {IEEE} International Congress on Big Data, Anchorage, AK, USA,
June 27 - July 2, 2014},
pages = {645--652},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/BigData.Congress.2014.137},
doi = {10.1109/BIGDATA.CONGRESS.2014.137},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bigdata/JhaQLMF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpc/FoxJQEL14,
author = {Geoffrey C. Fox and
Shantenu Jha and
Judy Qiu and
Saliya Ekanayake and
Andr{\'{e}} Luckow},
editor = {Lucio Grandinetti and
Gerhard R. Joubert and
Marcel Kunze and
Valerio Pascucci},
title = {Towards a Comprehensive Set of Big Data Benchmarks},
booktitle = {Big Data and High Performance Computing - Selected Papers from the
High Performance Computing Workshop, Cetraro, Italy, July 7-11, 2014},
series = {Advances in Parallel Computing},
volume = {26},
pages = {47--66},
publisher = {{IOS} Press},
year = {2014},
url = {https://doi.org/10.3233/978-1-61499-583-8-47},
doi = {10.3233/978-1-61499-583-8-47},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpc/FoxJQEL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ihtc/GesingNJ14,
author = {Sandra Gesing and
Jarek Nabrzyski and
Shantenu Jha},
title = {Gateways to high-perfomance and distributed computing resources for
global health challenges},
booktitle = {2014 {IEEE} Canada International Humanitarian Technology Conference,
{IHTC} 2014, Montreal, QC, Canada, June 1-4, 2014},
pages = {1--5},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/IHTC.2014.7147530},
doi = {10.1109/IHTC.2014.7147530},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ihtc/GesingNJ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/JhaQLMF14,
author = {Shantenu Jha and
Judy Qiu and
Andr{\'{e}} Luckow and
Pradeep Kumar Mantha and
Geoffrey Charles Fox},
title = {A Tale of Two Data-Intensive Paradigms: Applications, Abstractions,
and Architectures},
journal = {CoRR},
volume = {abs/1403.1528},
year = {2014},
url = {http://arxiv.org/abs/1403.1528},
eprinttype = {arXiv},
eprint = {1403.1528},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/JhaQLMF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/JhaCKPRW13,
author = {Shantenu Jha and
Murray Cole and
Daniel S. Katz and
Manish Parashar and
Omer F. Rana and
Jon B. Weissman},
title = {Distributed computing practice for large-scale science and engineering
applications},
journal = {Concurr. Comput. Pract. Exp.},
volume = {25},
number = {11},
pages = {1559--1585},
year = {2013},
url = {https://doi.org/10.1002/cpe.2897},
doi = {10.1002/CPE.2897},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/JhaCKPRW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HuangKJA13,
author = {Wei Huang and
Joohyun Kim and
Shantenu Jha and
Fareed Aboul{-}Ela},
title = {The Impact of a Ligand Binding on Strand Migration in the {SAM-I}
Riboswitch},
journal = {PLoS Comput. Biol.},
volume = {9},
number = {5},
year = {2013},
url = {https://doi.org/10.1371/journal.pcbi.1003069},
doi = {10.1371/JOURNAL.PCBI.1003069},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/HuangKJA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/SantcroosSSOLJ13,
author = {Mark Santcroos and
Barbera D. C. van Schaik and
Shayan Shahand and
S{\'{\i}}lvia Delgado Olabarriaga and
Andr{\'{e}} Luckow and
Shantenu Jha},
title = {Exploring Dynamic Enactment of Scientific Workflows Using Pilot-Abstractions},
booktitle = {13th {IEEE/ACM} International Symposium on Cluster, Cloud, and Grid
Computing, CCGrid 2013, Delft, Netherlands, May 13-16, 2013},
pages = {311--318},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/CCGrid.2013.17},
doi = {10.1109/CCGRID.2013.17},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccgrid/SantcroosSSOLJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/xsede/SmithKRBMJ13,
author = {Jack A. Smith and
Yaakoub El Khamra and
Melissa Romanus and
Thomas C. Bishop and
Pradeep Kumar Mantha and
Shantenu Jha},
editor = {Nancy Wilkins{-}Diehr},
title = {Scalable online comparative genomics of mononucleosomes: a BigJob},
booktitle = {Extreme Science and Engineering Discovery Environment: Gateway to
Discovery, XSEDE13, San Diego, CA, {USA} - July 22 - 25, 2013},
pages = {23:1--23:8},
publisher = {{ACM}},
year = {2013},
url = {https://doi.org/10.1145/2484762.2484819},
doi = {10.1145/2484762.2484819},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/xsede/SmithKRBMJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/xsede/RadakLHRWDGDYLJ13,
author = {Brian K. Radak and
Tai{-}Sung Lee and
Peng He and
Melissa Romanus and
Ole Weidner and
Wei Dai and
Emilio Gallicchio and
Nan{-}Jie Deng and
Darrin M. York and
Ronald M. Levy and
Shantenu Jha},
editor = {Nancy Wilkins{-}Diehr},
title = {A framework for flexible and scalable replica-exchange on production
distributed {CI}},
booktitle = {Extreme Science and Engineering Discovery Environment: Gateway to
Discovery, XSEDE13, San Diego, CA, {USA} - July 22 - 25, 2013},
pages = {26:1--26:8},
publisher = {{ACM}},
year = {2013},
url = {https://doi.org/10.1145/2484762.2484830},
doi = {10.1145/2484762.2484830},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/xsede/RadakLHRWDGDYLJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1301-6228,
author = {Andr{\'{e}} Luckow and
Mark Santcroos and
Ole Weidner and
Ashley Zebrowski and
Shantenu Jha},
title = {Pilot-Data: An Abstraction for Distributed Data},
journal = {CoRR},
volume = {abs/1301.6228},
year = {2013},
url = {http://arxiv.org/abs/1301.6228},
eprinttype = {arXiv},
eprint = {1301.6228},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1301-6228.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/grid/MaddineniKKJ12,
author = {Sharath Maddineni and
Joohyun Kim and
Yaakoub El Khamra and
Shantenu Jha},
title = {Distributed Application Runtime Environment {(DARE):} {A} Standards-based
Middleware Framework for Science-Gateways},
journal = {J. Grid Comput.},
volume = {10},
number = {4},
pages = {647--664},
year = {2012},
url = {https://doi.org/10.1007/s10723-012-9244-1},
doi = {10.1007/S10723-012-9244-1},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/grid/MaddineniKKJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/LuckowSMWMJ12,
author = {Andr{\'{e}} Luckow and
Mark Santcroos and
Andr{\'{e}} Merzky and
Ole Weidner and
Pradeep Kumar Mantha and
Shantenu Jha},
title = {P{\({_\ast}\)}: {A} model of pilot-abstractions},
booktitle = {8th {IEEE} International Conference on E-Science, e-Science 2012,
Chicago, IL, USA, October 8-12, 2012},
pages = {1--10},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/eScience.2012.6404423},
doi = {10.1109/ESCIENCE.2012.6404423},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/LuckowSMWMJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/SantcroosOKJ12,
author = {Mark Santcroos and
S{\'{\i}}lvia Delgado Olabarriaga and
Daniel S. Katz and
Shantenu Jha},
title = {Pilot abstractions for compute, data, and network},
booktitle = {8th {IEEE} International Conference on E-Science, e-Science 2012,
Chicago, IL, USA, October 8-12, 2012},
pages = {1--2},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/eScience.2012.6404459},
doi = {10.1109/ESCIENCE.2012.6404459},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/SantcroosOKJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpdc/LuckowSWMMJ12,
author = {Andr{\'{e}} Luckow and
Mark Santcroos and
Ole Weidner and
Andr{\'{e}} Merzky and
Sharath Maddineni and
Shantenu Jha},
editor = {Dick H. J. Epema and
Thilo Kielmann and
Matei Ripeanu},
title = {Towards a common model for pilot-jobs},
booktitle = {The 21st International Symposium on High-Performance Parallel and
Distributed Computing, HPDC'12, Delft, Netherlands - June 18 - 22,
2012},
pages = {123--124},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2287076.2287094},
doi = {10.1145/2287076.2287094},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpdc/LuckowSWMMJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/xsede/MukherjeeTFBJ12,
author = {Rajib Mukherjee and
Abhinav Thota and
Hideki Fujioka and
Thomas C. Bishop and
Shantenu Jha},
editor = {Craig Stewart},
title = {Running many molecular dynamics simulations on many supercomputers},
booktitle = {Proceedings of the 1st Conference of the Extreme Science and Engineering
Discovery Environment - Bridging from the eXtreme to the campus and
beyond, {XSEDE} '12, Chicago, Illinois, USA, July 16-20, 2012},
pages = {2:1--2:9},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2335755.2335787},
doi = {10.1145/2335755.2335787},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/xsede/MukherjeeTFBJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/xsede/RomanusMMBGMKJ12,
author = {Melissa Romanus and
Pradeep Kumar Mantha and
Matt McKenzie and
Thomas C. Bishop and
Emilio Gallicchio and
Andr{\'{e}} Merzky and
Yaakoub El Khamra and
Shantenu Jha},
editor = {Craig Stewart},
title = {The anatomy of successful {ECSS} projects: lessons of supporting high-throughput
high-performance ensembles on {XSEDE}},
booktitle = {Proceedings of the 1st Conference of the Extreme Science and Engineering
Discovery Environment - Bridging from the eXtreme to the campus and
beyond, {XSEDE} '12, Chicago, Illinois, USA, July 16-20, 2012},
pages = {46:1--46:9},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2335755.2335843},
doi = {10.1145/2335755.2335843},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/xsede/RomanusMMBGMKJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/xsede/MitchellQCJHOFF12,
author = {Jerome E. Mitchell and
Judy Qiu and
Massimo Canonio and
Shantenu Jha and
Linda B. Hayden and
Barbara Ann O'Leary and
Renato Figueiredo and
Geoffrey C. Fox},
editor = {Craig Stewart},
title = {FutureGrid education: using case studies to develop a curriculum for
communicating parallel and distributed computing concepts},
booktitle = {Proceedings of the 1st Conference of the Extreme Science and Engineering
Discovery Environment - Bridging from the eXtreme to the campus and
beyond, {XSEDE} '12, Chicago, Illinois, USA, July 16-20, 2012},
pages = {61:1--61:5},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2335755.2335859},
doi = {10.1145/2335755.2335859},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/xsede/MitchellQCJHOFF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1207-6644,
author = {Andr{\'{e}} Luckow and
Mark Santcroos and
Ole Weidner and
Andr{\'{e}} Merzky and
Pradeep Kumar Mantha and
Shantenu Jha},
title = {P*: {A} Model of Pilot-Abstractions},
journal = {CoRR},
volume = {abs/1207.6644},
year = {2012},
url = {http://arxiv.org/abs/1207.6644},
eprinttype = {arXiv},
eprint = {1207.6644},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1207-6644.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1208-2649,
author = {Daniel S. Katz and
Shantenu Jha and
Manish Parashar and
Omer F. Rana and
Jon B. Weissman},
title = {Survey and Analysis of Production Distributed Computing Infrastructures},
journal = {CoRR},
volume = {abs/1208.2649},
year = {2012},
url = {http://arxiv.org/abs/1208.2649},
eprinttype = {arXiv},
eprint = {1208.2649},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1208-2649.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/KimHMAJ11,
author = {Joohyun Kim and
Wei Huang and
Sharath Maddineni and
Fareed Aboul{-}Ela and
Shantenu Jha},
title = {Energy landscape analysis for regulatory {RNA} finding using scalable
distributed cyberinfrastructure},
journal = {Concurr. Comput. Pract. Exp.},
volume = {23},
number = {17},
pages = {2292--2304},
year = {2011},
url = {https://doi.org/10.1002/cpe.1796},
doi = {10.1002/CPE.1796},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/KimHMAJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fgcs/SehgalEMJ11,
author = {Saurabh Sehgal and
Mikl{\'{o}}s Erd{\'{e}}lyi and
Andr{\'{e}} Merzky and
Shantenu Jha},
title = {Understanding application-level interoperability: Scaling-out MapReduce
over high-performance grids and clouds},
journal = {Future Gener. Comput. Syst.},
volume = {27},
number = {5},
pages = {590--599},
year = {2011},
url = {https://doi.org/10.1016/j.future.2010.11.001},
doi = {10.1016/J.FUTURE.2010.11.001},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fgcs/SehgalEMJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sp/KimKRJP11,
author = {Hyunjoo Kim and
Yaakoub El Khamra and
Ivan Rodero and
Shantenu Jha and
Manish Parashar},
title = {Autonomic management of application workflows on hybrid computing
infrastructure},
journal = {Sci. Program.},
volume = {19},
number = {2-3},
pages = {75--89},
year = {2011},
url = {https://doi.org/10.3233/SPR-2011-0319},
doi = {10.3233/SPR-2011-0319},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/sp/KimKRJP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tg/Kenway0HMPWCJ11,
author = {Owain Kenway and
David W. Wright and
Helmut Heller and
Andr{\'{e}} Merzky and
Gavin J. Pringle and
Jules Wolfrat and
Peter V. Coveney and
Shantenu Jha},
editor = {John Towns and
Shawn Brown and
Daniel S. Katz},
title = {Towards high-throughput, high-performance computational estimation
of binding affinities for patient specific {HIV-1} protease sequences},
booktitle = {Proceedings of the 2011 TeraGrid Conference - Extreme Digital Discovery,
{TG} '11, Salt Lake City, Utah, USA, July 18-21, 2011},
pages = {4:1--4:8},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2016741.2016746},
doi = {10.1145/2016741.2016746},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/tg/Kenway0HMPWCJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tg/KimMJ11,
author = {Joohyun Kim and
Sharath Maddineni and
Shantenu Jha},
editor = {John Towns and
Shawn Brown and
Daniel S. Katz},
title = {Building gateways for life-science applications using the dynamic
application runtime environment {(DARE)} framework},
booktitle = {Proceedings of the 2011 TeraGrid Conference - Extreme Digital Discovery,
{TG} '11, Salt Lake City, Utah, USA, July 18-21, 2011},
pages = {38:1--38:8},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2016741.2016782},
doi = {10.1145/2016741.2016782},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/tg/KimMJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tg/0001ABHJS11,
author = {Frank L{\"{o}}ffler and
Gabrielle Allen and
Werner Benger and
Andrei Hutanu and
Shantenu Jha and
Erik Schnetter},
editor = {John Towns and
Shawn Brown and
Daniel S. Katz},
title = {Using the TeraGrid to teach scientific computing},
booktitle = {Proceedings of the 2011 TeraGrid Conference - Extreme Digital Discovery,
{TG} '11, Salt Lake City, Utah, USA, July 18-21, 2011},
pages = {55:1--55:7},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2016741.2016800},
doi = {10.1145/2016741.2016800},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/tg/0001ABHJS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/procedia/AllenBHJLS11,
author = {Gabrielle Allen and
Werner Benger and
Andrei Hutanu and
Shantenu Jha and
Frank L{\"{o}}ffler and
Erik Schnetter},
editor = {Mitsuhisa Sato and
Satoshi Matsuoka and
Peter M. A. Sloot and
G. Dick van Albada and
Jack J. Dongarra},
title = {A practical and comprehensive graduate course preparing students for
research involving scientific computing},
booktitle = {Proceedings of the International Conference on Computational Science,
{ICCS} 2011, Nanyang Technological University, Singapore, 1-3 June,
2011},
series = {Procedia Computer Science},
volume = {4},
pages = {1927--1936},
publisher = {Elsevier},
year = {2011},
url = {https://doi.org/10.1016/j.procs.2011.04.210},
doi = {10.1016/J.PROCS.2011.04.210},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/procedia/AllenBHJLS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/grid/2011,
editor = {Shantenu Jha and
Nils gentschen Felde and
Rajkumar Buyya and
Gilles Fedak},
title = {12th {IEEE/ACM} International Conference on Grid Computing, {GRID}
2011, Lyon, France, September 21-23, 2011},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://ieeexplore.ieee.org/xpl/conhome/6075048/proceeding},
isbn = {978-1-4577-1904-2},
timestamp = {Wed, 16 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/grid/2011.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/BalajiFLAMWSLTFKJSCR10,
author = {Pavan Balaji and
Wu{-}chun Feng and
Heshan Lin and
Jeremy S. Archuleta and
Satoshi Matsuoka and
Andrew S. Warren and
Jo{\~{a}}o Carlos Setubal and
Ewing L. Lusk and
Rajeev Thakur and
Ian T. Foster and
Daniel S. Katz and
Shantenu Jha and
K. Shinpaugh and
Susan Coghlan and
Daniel A. Reed},
title = {Global-scale distributed {I/O} with ParaMEDIC},
journal = {Concurr. Comput. Pract. Exp.},
volume = {22},
number = {16},
pages = {2266--2281},
year = {2010},
url = {https://doi.org/10.1002/cpe.1590},
doi = {10.1002/CPE.1590},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/BalajiFLAMWSLTFKJSCR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fgcs/CoveneyGJMMPSSSTZ10,
author = {Peter V. Coveney and
Giovanni Giupponi and
Shantenu Jha and
Steven Manos and
Jon MacLaren and
Stephen Pickles and
R. S. Saksena and
Thomas Soddemann and
James L. Suter and
Mary{-}Ann Thyveetil and
Stefan J. Zasada},
title = {Large scale computational science on federated international grids:
The role of switched optical networks},
journal = {Future Gener. Comput. Syst.},
volume = {26},
number = {1},
pages = {99--110},
year = {2010},
url = {https://doi.org/10.1016/j.future.2008.09.013},
doi = {10.1016/J.FUTURE.2008.09.013},
timestamp = {Thu, 20 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fgcs/CoveneyGJMMPSSSTZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/LuckowLJ10,
author = {Andr{\'{e}} Luckow and
Lukasz Lacinski and
Shantenu Jha},
title = {{SAGA} BigJob: An Extensible and Interoperable Pilot-Job Abstraction
for Distributed Applications and Systems},
booktitle = {10th {IEEE/ACM} International Conference on Cluster, Cloud and Grid
Computing, CCGrid 2010, 17-20 May 2010, Melbourne, Victoria, Australia},
pages = {135--144},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/CCGRID.2010.91},
doi = {10.1109/CCGRID.2010.91},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccgrid/LuckowLJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/KoKKTJ10,
author = {Soon{-}Heum Ko and
Nayong Kim and
Joohyun Kim and
Abhinav Thota and
Shantenu Jha},
title = {Efficient Runtime Environment for Coupled Multi-physics Simulations:
Dynamic Resource Allocation and Load-Balancing},
booktitle = {10th {IEEE/ACM} International Conference on Cluster, Cloud and Grid
Computing, CCGrid 2010, 17-20 May 2010, Melbourne, Victoria, Australia},
pages = {349--358},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/CCGRID.2010.107},
doi = {10.1109/CCGRID.2010.107},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccgrid/KoKKTJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cloudcom/KhamraKJP10,
author = {Yaakoub El Khamra and
Hyunjoo Kim and
Shantenu Jha and
Manish Parashar},
title = {Exploring the Performance Fluctuations of {HPC} Workloads on Clouds},
booktitle = {Cloud Computing, Second International Conference, CloudCom 2010, November
30 - December 3, 2010, Indianapolis, Indiana, USA, Proceedings},
pages = {383--387},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/CloudCom.2010.84},
doi = {10.1109/CLOUDCOM.2010.84},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cloudcom/KhamraKJP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cloudcom/LuckowJ10,
author = {Andr{\'{e}} Luckow and
Shantenu Jha},
title = {Abstractions for Loosely-Coupled and Ensemble-Based Simulations on
Azure},
booktitle = {Cloud Computing, Second International Conference, CloudCom 2010, November
30 - December 3, 2010, Indianapolis, Indiana, USA, Proceedings},
pages = {550--556},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/CloudCom.2010.85},
doi = {10.1109/CLOUDCOM.2010.85},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cloudcom/LuckowJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpdc/KimKJP10,
author = {Hyunjoo Kim and
Yaakoub El Khamra and
Shantenu Jha and
Manish Parashar},
editor = {Salim Hariri and
Kate Keahey},
title = {Exploring application and infrastructure adaptation on hybrid grid-cloud
infrastructure},
booktitle = {Proceedings of the 19th {ACM} International Symposium on High Performance
Distributed Computing, {HPDC} 2010, Chicago, Illinois, USA, June 21-25,
2010},
pages = {402--412},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1851476.1851536},
doi = {10.1145/1851476.1851536},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpdc/KimKJP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpdc/KimHMAJ10,
author = {Joohyun Kim and
Wei Huang and
Sharath Maddineni and
Fareed Aboul{-}Ela and
Shantenu Jha},
editor = {Salim Hariri and
Kate Keahey},
title = {Exploring the {RNA} folding energy landscape using scalable distributed
cyberinfrastructure},
booktitle = {Proceedings of the 19th {ACM} International Symposium on High Performance
Distributed Computing, {HPDC} 2010, Chicago, Illinois, USA, June 21-25,
2010},
pages = {477--488},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1851476.1851546},
doi = {10.1145/1851476.1851546},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpdc/KimHMAJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/siggraph/BeckJUBM10,
author = {Stephen David Beck and
Shantenu Jha and
Brygg Ullmer and
Chris Branton and
Sharath Maddineni},
editor = {Cindy Grimm},
title = {{GRENDL:} grid enabled distribution and control for Laptop Orchestras},
booktitle = {International Conference on Computer Graphics and Interactive Techniques,
{SIGGRAPH} 2010, Los Angeles, California, USA, July 26-30, 2010, Poster
Proceedings},
pages = {84:1},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1836845.1836936},
doi = {10.1145/1836845.1836936},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/siggraph/BeckJUBM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tg/KhamraJW10,
author = {Yaakoub El Khamra and
Shantenu Jha and
Christopher D. White},
editor = {Richard Moore and
Daniel S. Katz and
Shawn Brown},
title = {Modelling data-driven CO\({}_{\mbox{2}}\) sequestration using distributed
{HPC} cyberinfrastructure},
booktitle = {Proceedings of the 2010 TeraGrid Conference, {TG} '10, Pittsburgh,
Pennsylvania, USA, August 2-5, 2010},
pages = {6:1--6:8},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1838574.1838580},
doi = {10.1145/1838574.1838580},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/tg/KhamraJW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/JhaMF09,
author = {Shantenu Jha and
Andr{\'{e}} Merzky and
Geoffrey C. Fox},
title = {Using clouds to provide grids with higher levels of abstraction and
explicit support for usage modes},
journal = {Concurr. Comput. Pract. Exp.},
volume = {21},
number = {8},
pages = {1087--1108},
year = {2009},
url = {https://doi.org/10.1002/cpe.1406},
doi = {10.1002/CPE.1406},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/concurrency/JhaMF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/MiceliMJKM09,
author = {Chris Miceli and
Michael Miceli and
Shantenu Jha and
Hartmut Kaiser and
Andr{\'{e}} Merzky},
editor = {Franck Cappello and
Cho{-}Li Wang and
Rajkumar Buyya},
title = {Programming Abstractions for Data Intensive Computing on Clouds and
Grids},
booktitle = {9th {IEEE/ACM} International Symposium on Cluster Computing and the
Grid, CCGrid 2009, Shanghai, China, 18-21 May 2009},
pages = {478--483},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/CCGRID.2009.87},
doi = {10.1109/CCGRID.2009.87},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ccgrid/MiceliMJKM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cluster/YunLAKKJR09,
author = {Zhifeng Yun and
Zhou Lei and
Gabrielle Allen and
Daniel S. Katz and
Tevfik Kosar and
Shantenu Jha and
Jagannathan Ramanujam},
title = {An innovative application execution toolkit for multicluster grids},
booktitle = {Proceedings of the 2009 {IEEE} International Conference on Cluster
Computing, August 31 - September 4, 2009, New Orleans, Louisiana,
{USA}},
pages = {1--4},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/CLUSTR.2009.5289121},
doi = {10.1109/CLUSTR.2009.5289121},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cluster/YunLAKKJR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/MerzkySJK09,
author = {Andr{\'{e}} Merzky and
Katerina Stamou and
Shantenu Jha and
Daniel S. Katz},
title = {A Fresh Perspective on Developing and Executing DAG-Based Distributed
Applications: {A} Case-Study of SAGA-Based Montage},
booktitle = {Fifth International Conference on e-Science, e-Science 2009, 9-11
December 2009, Oxford, {UK}},
pages = {231--238},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/e-Science.2009.40},
doi = {10.1109/E-SCIENCE.2009.40},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/MerzkySJK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/KimKJP09,
author = {Hyunjoo Kim and
Yaakoub El Khamra and
Shantenu Jha and
Manish Parashar},
title = {An Autonomic Approach to Integrated {HPC} Grid and Cloud Usage},
booktitle = {Fifth International Conference on e-Science, e-Science 2009, 9-11
December 2009, Oxford, {UK}},
pages = {366--373},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/e-Science.2009.58},
doi = {10.1109/E-SCIENCE.2009.58},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/KimKJP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/europar/TaliaMHJ09,
author = {Domenico Talia and
Jason Maassen and
Fabrice Huet and
Shantenu Jha},
editor = {Henk J. Sips and
Dick H. J. Epema and
Hai{-}Xiang Lin},
title = {Introduction},
booktitle = {Euro-Par 2009 Parallel Processing, 15th International Euro-Par Conference,
Delft, The Netherlands, August 25-28, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5704},
pages = {629},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-03869-3\_59},
doi = {10.1007/978-3-642-03869-3\_59},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/europar/TaliaMHJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gpc/MerzkySJ09,
author = {Andr{\'{e}} Merzky and
Katerina Stamou and
Shantenu Jha},
title = {Application Level Interoperability between Clouds and Grids},
booktitle = {Workshops at the Grid and Pervasive Computing Conference, {GPC} 2009,
Geneva, Switzerland, May 4-8, 2009},
pages = {143--150},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/GPC.2009.17},
doi = {10.1109/GPC.2009.17},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gpc/MerzkySJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/grid/JhaKPRW09,
author = {Shantenu Jha and
Daniel S. Katz and
Manish Parashar and
Omer F. Rana and
Jon B. Weissman},
title = {Critical perspectives on large-scale distributed applications and
production Grids},
booktitle = {Proceedings of the 2009 10th {IEEE/ACM} International Conference on
Grid Computing, October 13-15, 2009, Banff, Alberta, Canada},
pages = {1--8},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/GRID.2009.5353064},
doi = {10.1109/GRID.2009.5353064},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/grid/JhaKPRW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/JhaKK09,
author = {Shantenu Jha and
Yaakoub El Khamra and
Joohyun Kim},
editor = {Gabrielle Allen and
Jaroslaw Nabrzyski and
Edward Seidel and
G. Dick van Albada and
Jack J. Dongarra and
Peter M. A. Sloot},
title = {Developing Scientific Applications with Loosely-Coupled Sub-tasks},
booktitle = {Computational Science - {ICCS} 2009, 9th International Conference,
Baton Rouge, LA, USA, May 25-27, 2009, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {5544},
pages = {641--650},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01970-8\_63},
doi = {10.1007/978-3-642-01970-8\_63},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccS/JhaKK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wicsa/JhaPR09,
author = {Shantenu Jha and
Manish Parashar and
Omer F. Rana},
editor = {Danny Weyns and
Sam Malek and
Rog{\'{e}}rio de Lemos and
Jesper Andersson},
title = {Self-adaptive Architectures for Autonomic Computational Science},
booktitle = {Self-Organizing Architectures, First International Workshop, {SOAR}
2009, Cambridge, UK, September 14, 2009, Revised Selected and Invited
Papers},
series = {Lecture Notes in Computer Science},
volume = {6090},
pages = {177--197},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-14412-7\_9},
doi = {10.1007/978-3-642-14412-7\_9},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wicsa/JhaPR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/clade/2009,
editor = {Thomas Rauber and
Gudula R{\"{u}}nger and
Emmanuel Jeannot and
Shantenu Jha},
title = {Proceedings of the 7th international workshop on Challenges of large
applications in distributed environments, CLADE@HPDC 2009, Garching
near Munich, Germany, June 10, 2009},
publisher = {{ACM}},
year = {2009},
url = {https://doi.org/10.1145/1552315},
doi = {10.1145/1552315},
isbn = {978-1-60558-588-8},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/clade/2009.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/europar/2008w,
editor = {Eduardo C{\'{e}}sar and
Michael Alexander and
Achim Streit and
Jesper Larsson Tr{\"{a}}ff and
Christophe C{\'{e}}rin and
Andreas Kn{\"{u}}pfer and
Dieter Kranzlm{\"{u}}ller and
Shantenu Jha},
title = {Euro-Par 2008 Workshops - Parallel Processing, {VHPC} 2008, {UNICORE}
2008, {HPPC} 2008, {SGS} 2008, {PROPER} 2008, {ROIA} 2008, and {DPA}
2008, Las Palmas de Gran Canaria, Spain, August 25-26, 2008, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {5415},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-00955-6},
doi = {10.1007/978-3-642-00955-6},
isbn = {978-3-642-00954-9},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/europar/2008w.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/LuckowJKMS08,
author = {Andr{\'{e}} Luckow and
Shantenu Jha and
Joohyun Kim and
Andr{\'{e}} Merzky and
Bettina Schnor},
title = {Distributed Replica-Exchange Simulations on Production Environments
Using {SAGA} and Migol},
booktitle = {Fourth International Conference on e-Science, e-Science 2008, 7-12
December 2008, Indianapolis, IN, {USA}},
pages = {253--260},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/eScience.2008.20},
doi = {10.1109/ESCIENCE.2008.20},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/LuckowJKMS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/europar/JhaKPRC08,
author = {Shantenu Jha and
Daniel S. Katz and
Manish Parashar and
Omer F. Rana and
Murray Cole},
editor = {Eduardo C{\'{e}}sar and
Michael Alexander and
Achim Streit and
Jesper Larsson Tr{\"{a}}ff and
Christophe C{\'{e}}rin and
Andreas Kn{\"{u}}pfer and
Dieter Kranzlm{\"{u}}ller and
Shantenu Jha},
title = {Abstractions for Distributed Systems {(DPA} 2008)},
booktitle = {Euro-Par 2008 Workshops - Parallel Processing, {VHPC} 2008, {UNICORE}
2008, {HPPC} 2008, {SGS} 2008, {PROPER} 2008, {ROIA} 2008, and {DPA}
2008, Las Palmas de Gran Canaria, Spain, August 25-26, 2008, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {5415},
pages = {401},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-642-00955-6\_45},
doi = {10.1007/978-3-642-00955-6\_45},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/europar/JhaKPRC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mg/ChakrabortyJ08,
author = {Promita Chakraborty and
Shantenu Jha},
editor = {Daniel S. Katz and
Craig A. Lee},
title = {Design and performance analysis of a distributed {HPC} molecular dynamics
code on distributed resources},
booktitle = {Proceedings of the 15th {ACM} Mardi Gras conference: From lightweight
mash-ups to lambda grids: Understanding the spectrum of distributed
computing requirements, applications, tools, infrastructures, interoperability,
and the incremental adoption of key capabilities, Baton Rouge, Louisiana,
USA, January 29 - February 3, 2008},
series = {{ACM} International Conference Proceeding Series},
volume = {xxx},
pages = {21},
publisher = {{ACM}},
year = {2008},
url = {https://doi.org/10.1145/1341811.1341835},
doi = {10.1145/1341811.1341835},
timestamp = {Sun, 19 Nov 2023 10:24:07 +0100},
biburl = {https://dblp.org/rec/conf/mg/ChakrabortyJ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cluster/BoghosianCDFJKK07,
author = {Bruce M. Boghosian and
Peter V. Coveney and
Suchuan Dong and
Lucas Finn and
Shantenu Jha and
George E. Karniadakis and
Nicholas T. Karonis},
title = {NEKTAR, {SPICE} and Vortonics: using federated grids for large scale
scientific applications},
journal = {Clust. Comput.},
volume = {10},
number = {3},
pages = {351--364},
year = {2007},
url = {https://doi.org/10.1007/s10586-007-0029-4},
doi = {10.1007/S10586-007-0029-4},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cluster/BoghosianCDFJKK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/JhaKKW07,
author = {Shantenu Jha and
Hartmut Kaiser and
Yaakoub El Khamra and
Ole Weidner},
title = {Design and Implementation of Network Performance Aware Applications
Using {SAGA} and Cactus},
booktitle = {Third International Conference on e-Science and Grid Computing, e-Science
2007, 10-13 December 2007, Bangalore, India},
pages = {143--150},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/E-SCIENCE.2007.28},
doi = {10.1109/E-SCIENCE.2007.28},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/eScience/JhaKKW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/JhaKMW07,
author = {Shantenu Jha and
Hartmut Kaiser and
Andr{\'{e}} Merzky and
Ole Weidner},
title = {Grid Interoperability at the Application Level Using {SAGA}},
booktitle = {Third International Conference on e-Science and Grid Computing, e-Science
2007, 10-13 December 2007, Bangalore, India},
pages = {584--591},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/E-SCIENCE.2007.39},
doi = {10.1109/E-SCIENCE.2007.39},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/eScience/JhaKMW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clade/BoghosianCDFJKK06,
author = {Bruce M. Boghosian and
Peter V. Coveney and
Suchuan Dong and
Lucas Finn and
Shantenu Jha and
George E. Karniadakis and
Nicholas T. Karonis},
title = {NEKTAR, {SPICE} and Vortonics: using federated grids for large scale
scientific applications},
booktitle = {2006 {IEEE} Challenges of Large Applications in Distributed Environments,
CLADE@HPDC 2006, Paris, France, June 19, 2006},
pages = {34--42},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/CLADE.2006.1652052},
doi = {10.1109/CLADE.2006.1652052},
timestamp = {Wed, 16 Oct 2019 14:14:54 +0200},
biburl = {https://dblp.org/rec/conf/clade/BoghosianCDFJKK06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/HarveyJTC06,
author = {Matt J. Harvey and
Shantenu Jha and
Mary{-}Ann Thyveetil and
Peter V. Coveney},
title = {Using Lambda Networks to Enhance Performance of Interactive Large
Simulations},
booktitle = {Second International Conference on e-Science and Grid Technologies
(e-Science 2006), 4-6 December 2006, Amsterdam, The Netherlands},
pages = {40},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/E-SCIENCE.2006.261124},
doi = {10.1109/E-SCIENCE.2006.261124},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/HarveyJTC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/ChinHJC05,
author = {Jonathan Chin and
Matthew J. Harvey and
Shantenu Jha and
Peter V. Coveney},
title = {Scientific grid computing: the first generation},
journal = {Comput. Sci. Eng.},
volume = {7},
number = {5},
pages = {24--32},
year = {2005},
url = {https://doi.org/10.1109/MCSE.2005.100},
doi = {10.1109/MCSE.2005.100},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cse/ChinHJC05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/JhaCL05,
author = {Shantenu Jha and
Peter V. Coveney and
Charles A. Laughton},
title = {Force field validation for nucleic acid simulations: Comparing energies
and dynamics of a {DNA} dodecamer},
journal = {J. Comput. Chem.},
volume = {26},
number = {15},
pages = {1617--1627},
year = {2005},
url = {https://doi.org/10.1002/jcc.20300},
doi = {10.1002/JCC.20300},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcc/JhaCL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/JhaCH05,
author = {Shantenu Jha and
Peter V. Coveney and
Matt J. Harvey},
title = {{SPICE:} Simulated Pore Interactive Computing Environment},
booktitle = {Proceedings of the {ACM/IEEE} {SC2005} Conference on High Performance
Networking and Computing, November 12-18, 2005, Seattle, WA, USA,
CD-Rom},
pages = {70},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/SC.2005.65},
doi = {10.1109/SC.2005.65},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/JhaCH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/ChinCJ04,
author = {Jonathan Chin and
Peter V. Coveney and
Shantenu Jha},
title = {The Current State of the Grid},
journal = {Comput. Sci. Eng.},
volume = {6},
number = {5},
pages = {75--77},
year = {2004},
url = {https://doi.org/10.1109/mcse.2004.43},
doi = {10.1109/MCSE.2004.43},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cse/ChinCJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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