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BibTeX records: Jan Hasenauer
@article{DBLP:journals/bioinformatics/YuzeirBGHSY23, author = {Altay Yuzeir and David Alejandro Bejarano and Stephan Grein and Jan Hasenauer and Andreas Schlitzer and Jiangyan Yu}, title = {IntestLine: a shiny-based application to map the rolled intestinal tissue onto a line}, journal = {Bioinform.}, volume = {39}, number = {4}, year = {2023}, url = {https://doi.org/10.1093/bioinformatics/btad140}, doi = {10.1093/BIOINFORMATICS/BTAD140}, timestamp = {Fri, 15 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/YuzeirBGHSY23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/HuthAGCTH23, author = {Manuel Huth and Jonas Arruda and Roy Gusinow and Lorenzo Contento and Evelina Tacconelli and Jan Hasenauer}, title = {Accessibility of covariance information creates vulnerability in Federated Learning frameworks}, journal = {Bioinform.}, volume = {39}, number = {9}, year = {2023}, url = {https://doi.org/10.1093/bioinformatics/btad531}, doi = {10.1093/BIOINFORMATICS/BTAD531}, timestamp = {Fri, 15 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/HuthAGCTH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/AlamoudiSMSBGBH23, author = {Emad Alamoudi and Yannik Sch{\"{a}}lte and Robert M{\"{u}}ller and J{\"{o}}rn Starru{\ss} and Nils Bundgaard and Frederik Graw and Lutz Brusch and Jan Hasenauer}, title = {FitMultiCell: simulating and parameterizing computational models of multi-scale and multi-cellular processes}, journal = {Bioinform.}, volume = {39}, number = {11}, year = {2023}, url = {https://doi.org/10.1093/bioinformatics/btad674}, doi = {10.1093/BIOINFORMATICS/BTAD674}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/AlamoudiSMSBGBH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/SchalteFJVPSLWRMSSGDDWH23, author = {Yannik Sch{\"{a}}lte and Fabian Fr{\"{o}}hlich and Paul J. Jost and Jakob Vanhoefer and Dilan Pathirana and Paul Stapor and Polina A. Lakrisenko and Dantong Wang and Elba Raim{\'{u}}ndez{-}{\'{A}}lvarez and Simon Merkt and Leonard Schmiester and Philipp St{\"{a}}dter and Stephan Grein and Erika Dudkin and Domagoj Doresic and Daniel Weindl and Jan Hasenauer}, title = {pyPESTO: a modular and scalable tool for parameter estimation for dynamic models}, journal = {Bioinform.}, volume = {39}, number = {11}, year = {2023}, url = {https://doi.org/10.1093/bioinformatics/btad711}, doi = {10.1093/BIOINFORMATICS/BTAD711}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/SchalteFJVPSLWRMSSGDDWH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/VaisbandSGGGZH23, author = {Marc Vaisband and Maria Schubert and Franz Josef Gassner and Roland Geisberger and Richard Greil and Nadja Zaborsky and Jan Hasenauer}, title = {Validation of genetic variants from {NGS} data using deep convolutional neural networks}, journal = {{BMC} Bioinform.}, volume = {24}, number = {1}, pages = {158}, year = {2023}, url = {https://doi.org/10.1186/s12859-023-05255-7}, doi = {10.1186/S12859-023-05255-7}, timestamp = {Mon, 24 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/VaisbandSGGGZH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LakrisenkoSGPPFLWH23, author = {Polina A. Lakrisenko and Paul Stapor and Stephan Grein and Lukasz Paszkowski and Dilan Pathirana and Fabian Fr{\"{o}}hlich and Glenn Terje Lines and Daniel Weindl and Jan Hasenauer}, title = {Efficient computation of adjoint sensitivities at steady-state in {ODE} models of biochemical reaction networks}, journal = {PLoS Comput. Biol.}, volume = {19}, number = {1}, year = {2023}, url = {https://doi.org/10.1371/journal.pcbi.1010783}, doi = {10.1371/JOURNAL.PCBI.1010783}, timestamp = {Sat, 29 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LakrisenkoSGPPFLWH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tcbb/VillaverdeRHB23, author = {Alejandro F. Villaverde and Elba Raim{\'{u}}ndez{-}{\'{A}}lvarez and Jan Hasenauer and Julio R. Banga}, title = {Assessment of Prediction Uncertainty Quantification Methods in Systems Biology}, journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.}, volume = {20}, number = {3}, pages = {1725--1736}, year = {2023}, url = {https://doi.org/10.1109/TCBB.2022.3213914}, doi = {10.1109/TCBB.2022.3213914}, timestamp = {Thu, 27 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tcbb/VillaverdeRHB23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/ContentoSWH23, author = {Lorenzo Contento and Paul Stapor and Daniel Weindl and Jan Hasenauer}, editor = {Jun Pang and Joachim Niehren}, title = {A More Expressive Spline Representation for {SBML} Models Improves Code Generation Performance in {AMICI}}, booktitle = {Computational Methods in Systems Biology - 21st International Conference, {CMSB} 2023, Luxembourg City, Luxembourg, September 13-15, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14137}, pages = {36--43}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-3-031-42697-1\_3}, doi = {10.1007/978-3-031-42697-1\_3}, timestamp = {Sun, 24 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/ContentoSWH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/VillaverdePFHB22, author = {Alejandro F. Villaverde and Dilan Pathirana and Fabian Fr{\"{o}}hlich and Jan Hasenauer and Julio R. Banga}, title = {A protocol for dynamic model calibration}, journal = {Briefings Bioinform.}, volume = {23}, number = {1}, year = {2022}, url = {https://doi.org/10.1093/bib/bbab387}, doi = {10.1093/BIB/BBAB387}, timestamp = {Sat, 13 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/VillaverdePFHB22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jossw/SchalteKAH22, author = {Yannik Sch{\"{a}}lte and Emmanuel Klinger and Emad Alamoudi and Jan Hasenauer}, title = {pyABC: Efficient and robust easy-to-use approximate Bayesian computation}, journal = {J. Open Source Softw.}, volume = {7}, number = {74}, pages = {4304}, year = {2022}, url = {https://doi.org/10.21105/joss.04304}, doi = {10.21105/JOSS.04304}, timestamp = {Mon, 25 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jossw/SchalteKAH22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ShaikhSVMWAAAAB22, author = {Bilal Shaikh and Lucian P. Smith and Dan Vasilescu and Gnaneswara Marupilla and Michael Wilson and Eran Agmon and Henry Agnew and Steven S. Andrews and Azraf Anwar and Moritz E. Beber and Frank T. Bergmann and David Brooks and Lutz Brusch and Laurence Calzone and Kiri Choi and Joshua Cooper and John Detloff and Brian Drawert and Michel Dumontier and G. Bard Ermentrout and James R. Faeder and Andrew P. Freiburger and Fabian Fr{\"{o}}hlich and Akira Funahashi and Alan Garny and John H. Gennari and Padraig Gleeson and Anne Goelzer and Zachary B. Haiman and Jan Hasenauer and Joseph L. Hellerstein and Henning Hermjakob and Stefan Hoops and Jon C. Ison and Diego Jahn and Henry V. Jakubowski and Ryann Jordan and Mat{\'{u}}s Kalas and Matthias K{\"{o}}nig and Wolfram Liebermeister and Rahuman S. Malik{-}Sheriff and Synchon Mandal and Robert A. McDougal and J. Kyle Medley and Pedro Mendes and Robert M{\"{u}}ller and Chris J. Myers and Aur{\'{e}}lien Naldi and Tung V. N. Nguyen and David P. Nickerson and Brett G. Olivier and Drashti Patoliya and Lo{\"{\i}}c Paulev{\'{e}} and Linda R. Petzold and Ankita Priya and Anand K. Rampadarath and Johann M. Rohwer and Ali S. Saglam and Dilawar Singh and Ankur Sinha and Jacky L. Snoep and Hugh Sorby and Ryan K. Spangler and J{\"{o}}rn Starru{\ss} and Payton J. Thomas and David D. van Niekerk and Daniel Weindl and Fengkai Zhang and Anna Zhukova and Arthur P. Goldberg and James C. Schaff and Michael L. Blinov and Herbert M. Sauro and Ion I. Moraru and Jonathan R. Karr}, title = {BioSimulators: a central registry of simulation engines and services for recommending specific tools}, journal = {Nucleic Acids Res.}, volume = {50}, number = {{W1}}, pages = {108--114}, year = {2022}, url = {https://doi.org/10.1093/nar/gkac331}, doi = {10.1093/NAR/GKAC331}, timestamp = {Tue, 24 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ShaikhSVMWAAAAB22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/HokszaGOHS21, author = {David Hoksza and Piotr Gawron and Marek Ostaszewski and Jan Hasenauer and Reinhard Schneider}, title = {Closing the gap between formats for storing layout information in systems biology}, journal = {Briefings Bioinform.}, volume = {22}, number = {1}, pages = {608}, year = {2021}, url = {https://doi.org/10.1093/bib/bbaa030}, doi = {10.1093/BIB/BBAA030}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bib/HokszaGOHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/FrohlichWSPPLSH21, author = {Fabian Fr{\"{o}}hlich and Daniel Weindl and Yannik Sch{\"{a}}lte and Dilan Pathirana and Lukasz Paszkowski and Glenn Terje Lines and Paul Stapor and Jan Hasenauer}, title = {{AMICI:} high-performance sensitivity analysis for large ordinary differential equation models}, journal = {Bioinform.}, volume = {37}, number = {20}, pages = {3676--3677}, year = {2021}, url = {https://doi.org/10.1093/bioinformatics/btab227}, doi = {10.1093/BIOINFORMATICS/BTAB227}, timestamp = {Tue, 12 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/FrohlichWSPPLSH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/DragerHBBCCHKNM21, author = {Andreas Dr{\"{a}}ger and Tom{\'{a}}s Helikar and Matteo Barberis and Marc R. Birtwistle and Laurence Calzone and Claudine Chaouiya and Jan Hasenauer and Jonathan R. Karr and Anna Niarakis and Mar{\'{\i}}a Rodr{\'{\i}}guez Mart{\'{\i}}nez and Julio Saez{-}Rodriguez and Juilee Thakar}, title = {SysMod: the {ISCB} community for data-driven computational modelling and multi-scale analysis of biological systems}, journal = {Bioinform.}, volume = {37}, number = {21}, pages = {3702--3706}, year = {2021}, url = {https://doi.org/10.1093/bioinformatics/btab229}, doi = {10.1093/BIOINFORMATICS/BTAB229}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/DragerHBBCCHKNM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/SchmiesterWH21, author = {Leonard Schmiester and Daniel Weindl and Jan Hasenauer}, title = {Efficient gradient-based parameter estimation for dynamic models using qualitative data}, journal = {Bioinform.}, volume = {37}, number = {23}, pages = {4493--4500}, year = {2021}, url = {https://doi.org/10.1093/bioinformatics/btab512}, doi = {10.1093/BIOINFORMATICS/BTAB512}, timestamp = {Tue, 12 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/SchmiesterWH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jossw/VanhoeferMPSH21, author = {Jakob Vanhoefer and Marta R. A. Matos and Dilan Pathirana and Yannik Sch{\"{a}}lte and Jan Hasenauer}, title = {yaml2sbml: Human-readable and -writable specification of {ODE} models and their conversion to {SBML}}, journal = {J. Open Source Softw.}, volume = {6}, number = {61}, pages = {3215}, year = {2021}, url = {https://doi.org/10.21105/joss.03215}, doi = {10.21105/JOSS.03215}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jossw/VanhoeferMPSH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/SchmiesterSBCDE21, author = {Leonard Schmiester and Yannik Sch{\"{a}}lte and Frank T. Bergmann and Tacio Camba and Erika Dudkin and Janine Egert and Fabian Fr{\"{o}}hlich and Lara Fuhrmann and Adrian L. Hauber and Svenja Kemmer and Polina A. Lakrisenko and Carolin Loos and Simon Merkt and Wolfgang M{\"{u}}ller and Dilan Pathirana and Elba Raim{\'{u}}ndez{-}{\'{A}}lvarez and Lukas Refisch and Marcus Rosenblatt and Paul Stapor and Philipp St{\"{a}}dter and Dantong Wang and Franz{-}Georg Wieland and Julio R. Banga and Jens Timmer and Alejandro F. Villaverde and Sven Sahle and Clemens Kreutz and Jan Hasenauer and Daniel Weindl}, title = {PEtab - Interoperable specification of parameter estimation problems in systems biology}, journal = {PLoS Comput. Biol.}, volume = {17}, number = {1}, year = {2021}, url = {https://doi.org/10.1371/journal.pcbi.1008646}, doi = {10.1371/JOURNAL.PCBI.1008646}, timestamp = {Wed, 07 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/SchmiesterSBCDE21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/HokszaGOHS20, author = {David Hoksza and Piotr Gawron and Marek Ostaszewski and Jan Hasenauer and Reinhard Schneider}, title = {Closing the gap between formats for storing layout information in systems biology}, journal = {Briefings Bioinform.}, volume = {21}, number = {4}, pages = {1249--1260}, year = {2020}, url = {https://doi.org/10.1093/bib/bbz067}, doi = {10.1093/BIB/BBZ067}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bib/HokszaGOHS20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/SchmiesterSFHW20, author = {Leonard Schmiester and Yannik Sch{\"{a}}lte and Fabian Fr{\"{o}}hlich and Jan Hasenauer and Daniel Weindl}, title = {Efficient parameterization of large-scale dynamic models based on relative measurements}, journal = {Bioinform.}, volume = {36}, number = {2}, pages = {594--602}, year = {2020}, url = {https://doi.org/10.1093/bioinformatics/btz581}, doi = {10.1093/BIOINFORMATICS/BTZ581}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/SchmiesterSFHW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/SchalteH20, author = {Yannik Sch{\"{a}}lte and Jan Hasenauer}, title = {Efficient exact inference for dynamical systems with noisy measurements using sequential approximate Bayesian computation}, journal = {Bioinform.}, volume = {36}, number = {Supplement-1}, pages = {i551--i559}, year = {2020}, url = {https://doi.org/10.1093/bioinformatics/btaa397}, doi = {10.1093/BIOINFORMATICS/BTAA397}, timestamp = {Fri, 25 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/SchalteH20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/Raimundez-Alvarez20, author = {Elba Raim{\'{u}}ndez{-}{\'{A}}lvarez and Simone Keller and Gwen Zwingenberger and Karolin Ebert and Sabine Hug and Fabian J. Theis and Dieter Maier and Birgit Luber and Jan Hasenauer}, title = {Model-based analysis of response and resistance factors of cetuximab treatment in gastric cancer cell lines}, journal = {PLoS Comput. Biol.}, volume = {16}, number = {3}, year = {2020}, url = {https://doi.org/10.1371/journal.pcbi.1007147}, doi = {10.1371/JOURNAL.PCBI.1007147}, timestamp = {Thu, 10 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/Raimundez-Alvarez20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/OstaszewskiGKMZ19, author = {Marek Ostaszewski and Stephan Gebel and Inna Kuperstein and Alexander Mazein and Andrei Yu. Zinovyev and Ugur Dogrusoz and Jan Hasenauer and Ronan M. T. Fleming and Nicolas Le Nov{\`{e}}re and Piotr Gawron and Thomas S. Ligon and Anna Niarakis and David P. Nickerson and Daniel Weindl and Rudi Balling and Emmanuel Barillot and Charles Auffray and Reinhard Schneider}, title = {Community-driven roadmap for integrated disease maps}, journal = {Briefings Bioinform.}, volume = {20}, number = {2}, pages = {659--670}, year = {2019}, url = {https://doi.org/10.1093/bib/bby024}, doi = {10.1093/BIB/BBY024}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bib/OstaszewskiGKMZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/VillaverdeFWHB19, author = {Alejandro Fern{\'{a}}ndez Villaverde and Fabian Fr{\"{o}}hlich and Daniel Weindl and Jan Hasenauer and Julio R. Banga}, title = {Benchmarking optimization methods for parameter estimation in large kinetic models}, journal = {Bioinform.}, volume = {35}, number = {5}, pages = {830--838}, year = {2019}, url = {https://doi.org/10.1093/bioinformatics/bty736}, doi = {10.1093/BIOINFORMATICS/BTY736}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/VillaverdeFWHB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/HassLRTHK19, author = {Helge Hass and Carolin Loos and Elba Raim{\'{u}}ndez{-}{\'{A}}lvarez and Jens Timmer and Jan Hasenauer and Clemens Kreutz}, title = {Benchmark problems for dynamic modeling of intracellular processes}, journal = {Bioinform.}, volume = {35}, number = {17}, pages = {3073--3082}, year = {2019}, url = {https://doi.org/10.1093/bioinformatics/btz020}, doi = {10.1093/BIOINFORMATICS/BTZ020}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/HassLRTHK19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/StaporWBHLFKHFH18, author = {Paul Stapor and Daniel Weindl and Benjamin Ballnus and Sabine Hug and Carolin Loos and Anna Fiedler and Sabrina Krause and Sabrina Hross and Fabian Fr{\"{o}}hlich and Jan Hasenauer}, title = {{PESTO:} Parameter EStimation TOolbox}, journal = {Bioinform.}, volume = {34}, number = {4}, pages = {705--707}, year = {2018}, url = {https://doi.org/10.1093/bioinformatics/btx676}, doi = {10.1093/BIOINFORMATICS/BTX676}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/StaporWBHLFKHFH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/LigonFCBBH18, author = {Thomas S. Ligon and Fabian Fr{\"{o}}hlich and Oana Chis and Julio R. Banga and Eva Balsa{-}Canto and Jan Hasenauer}, title = {GenSSI 2.0: multi-experiment structural identifiability analysis of {SBML} models}, journal = {Bioinform.}, volume = {34}, number = {8}, pages = {1421--1423}, year = {2018}, url = {https://doi.org/10.1093/bioinformatics/btx735}, doi = {10.1093/BIOINFORMATICS/BTX735}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/LigonFCBBH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/StaporFH18, author = {Paul Stapor and Fabian Fr{\"{o}}hlich and Jan Hasenauer}, title = {Optimization and profile calculation of {ODE} models using second order adjoint sensitivity analysis}, journal = {Bioinform.}, volume = {34}, number = {13}, pages = {i151--i159}, year = {2018}, url = {https://doi.org/10.1093/bioinformatics/bty230}, doi = {10.1093/BIOINFORMATICS/BTY230}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/StaporFH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BallnusSTH18, author = {Benjamin Ballnus and Steffen Schaper and Fabian J. Theis and Jan Hasenauer}, title = {Bayesian parameter estimation for biochemical reaction networks using region-based adaptive parallel tempering}, journal = {Bioinform.}, volume = {34}, number = {13}, pages = {i494--i501}, year = {2018}, url = {https://doi.org/10.1093/bioinformatics/bty229}, doi = {10.1093/BIOINFORMATICS/BTY229}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BallnusSTH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KlingerRH18, author = {Emmanuel Klinger and Dennis Rickert and Jan Hasenauer}, title = {pyABC: distributed, likelihood-free inference}, journal = {Bioinform.}, volume = {34}, number = {20}, pages = {3591--3593}, year = {2018}, url = {https://doi.org/10.1093/bioinformatics/bty361}, doi = {10.1093/BIOINFORMATICS/BTY361}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/KlingerRH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/LoosKH18, author = {Carolin Loos and Sabrina Krause and Jan Hasenauer}, title = {Hierarchical optimization for the efficient parametrization of {ODE} models}, journal = {Bioinform.}, volume = {34}, number = {24}, pages = {4266--4273}, year = {2018}, url = {https://doi.org/10.1093/bioinformatics/bty514}, doi = {10.1093/BIOINFORMATICS/BTY514}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/LoosKH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/FeigelmanWTMH18, author = {Justin Feigelman and Daniel Weindl and Fabian J. Theis and Carsten Marr and Jan Hasenauer}, editor = {Milan Ceska and David Safr{\'{a}}nek}, title = {{LNA++:} Linear Noise Approximation with First and Second Order Sensitivities}, booktitle = {Computational Methods in Systems Biology - 16th International Conference, {CMSB} 2018, Brno, Czech Republic, September 12-14, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11095}, pages = {300--306}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-99429-1\_19}, doi = {10.1007/978-3-319-99429-1\_19}, timestamp = {Wed, 30 Oct 2019 16:34:37 +0100}, biburl = {https://dblp.org/rec/conf/cmsb/FeigelmanWTMH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MaierLH17, author = {Corinna Maier and Carolin Loos and Jan Hasenauer}, title = {Robust parameter estimation for dynamical systems from outlier-corrupted data}, journal = {Bioinform.}, volume = {33}, number = {5}, pages = {718--725}, year = {2017}, url = {https://doi.org/10.1093/bioinformatics/btw703}, doi = {10.1093/BIOINFORMATICS/BTW703}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MaierLH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/FrohlichTRH17, author = {Fabian Fr{\"{o}}hlich and Fabian J. Theis and Joachim O. R{\"{a}}dler and Jan Hasenauer}, title = {Parameter estimation for dynamical systems with discrete events and logical operations}, journal = {Bioinform.}, volume = {33}, number = {7}, pages = {1049--1056}, year = {2017}, url = {https://doi.org/10.1093/bioinformatics/btw764}, doi = {10.1093/BIOINFORMATICS/BTW764}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/FrohlichTRH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KazeroonianTH17, author = {Atefeh Kazeroonian and Fabian J. Theis and Jan Hasenauer}, title = {A scalable moment-closure approximation for large-scale biochemical reaction networks}, journal = {Bioinform.}, volume = {33}, number = {14}, pages = {i293--i300}, year = {2017}, url = {https://doi.org/10.1093/bioinformatics/btx249}, doi = {10.1093/BIOINFORMATICS/BTX249}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KazeroonianTH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/BallnusHHGHT17, author = {Benjamin Ballnus and Sabine Hug and Kathrin Hatz and Linus G{\"{o}}rlitz and Jan Hasenauer and Fabian J. Theis}, title = {Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {1}, pages = {63:1--63:18}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0433-1}, doi = {10.1186/S12918-017-0433-1}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/BallnusHHGHT17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FrohlichKTH17, author = {Fabian Fr{\"{o}}hlich and Barbara Kaltenbacher and Fabian J. Theis and Jan Hasenauer}, title = {Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks}, journal = {PLoS Comput. Biol.}, volume = {13}, number = {1}, year = {2017}, url = {https://doi.org/10.1371/journal.pcbi.1005331}, doi = {10.1371/JOURNAL.PCBI.1005331}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FrohlichKTH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/KlingerH17, author = {Emmanuel Klinger and Jan Hasenauer}, editor = {J{\'{e}}r{\^{o}}me Feret and Heinz Koeppl}, title = {A Scheme for Adaptive Selection of Population Sizes in Approximate Bayesian Computation - Sequential Monte Carlo}, booktitle = {Computational Methods in Systems Biology - 15th International Conference, {CMSB} 2017, Darmstadt, Germany, September 27-29, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10545}, pages = {128--144}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-67471-1\_8}, doi = {10.1007/978-3-319-67471-1\_8}, timestamp = {Tue, 14 May 2019 10:00:49 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/KlingerH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/HrossH16, author = {Sabrina Hross and Jan Hasenauer}, title = {Analysis of {CFSE} time-series data using division-, age- and label-structured population models}, journal = {Bioinform.}, volume = {32}, number = {15}, pages = {2321--2329}, year = {2016}, url = {https://doi.org/10.1093/bioinformatics/btw131}, doi = {10.1093/BIOINFORMATICS/BTW131}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/HrossH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/GeissenHHHTR16, author = {Eva{-}Maria Geissen and Jan Hasenauer and Stephanie Heinrich and Silke Hauf and Fabian J. Theis and Nicole Radde}, title = {{MEMO:} multi-experiment mixture model analysis of censored data}, journal = {Bioinform.}, volume = {32}, number = {16}, pages = {2464--2472}, year = {2016}, url = {https://doi.org/10.1093/bioinformatics/btw190}, doi = {10.1093/BIOINFORMATICS/BTW190}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/GeissenHHHTR16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/FiedlerRTHH16, author = {Anna Fiedler and Sebastian Raeth and Fabian J. Theis and Angelika Hausser and Jan Hasenauer}, title = {Tailored parameter optimization methods for ordinary differential equation models with steady-state constraints}, journal = {{BMC} Syst. Biol.}, volume = {10}, pages = {80}, year = {2016}, url = {https://doi.org/10.1186/s12918-016-0319-7}, doi = {10.1186/S12918-016-0319-7}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/FiedlerRTHH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FrohlichTKTGH16, author = {Fabian Fr{\"{o}}hlich and Philipp Thomas and Atefeh Kazeroonian and Fabian J. Theis and Ramon Grima and Jan Hasenauer}, title = {Inference for Stochastic Chemical Kinetics Using Moment Equations and System Size Expansion}, journal = {PLoS Comput. Biol.}, volume = {12}, number = {7}, year = {2016}, url = {https://doi.org/10.1371/journal.pcbi.1005030}, doi = {10.1371/JOURNAL.PCBI.1005030}, timestamp = {Thu, 10 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FrohlichTKTGH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/sac/HugSHMT16, author = {Sabine Hug and Michael Schwarzfischer and Jan Hasenauer and Carsten Marr and Fabian J. Theis}, title = {An adaptive scheduling scheme for calculating Bayes factors with thermodynamic integration using Simpson's rule}, journal = {Stat. Comput.}, volume = {26}, number = {3}, pages = {663--677}, year = {2016}, url = {https://doi.org/10.1007/s11222-015-9550-0}, doi = {10.1007/S11222-015-9550-0}, timestamp = {Wed, 25 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/sac/HugSHMT16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/LoosFH16, author = {Carolin Loos and Anna Fiedler and Jan Hasenauer}, editor = {Ezio Bartocci and Pietro Li{\`{o}} and Nicola Paoletti}, title = {Parameter Estimation for Reaction Rate Equation Constrained Mixture Models}, booktitle = {Computational Methods in Systems Biology - 14th International Conference, {CMSB} 2016, Cambridge, UK, September 21-23, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9859}, pages = {186--200}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-45177-0\_12}, doi = {10.1007/978-3-319-45177-0\_12}, timestamp = {Sun, 02 Jun 2019 21:13:15 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/LoosFH16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RaueSSKMHVTAEMH15, author = {Andreas Raue and Bernhard Steiert and Max Schelker and Clemens Kreutz and Tim Maiwald and Helge Hass and Joep Vanlier and Christian T{\"{o}}nsing and Lorenz Adlung and Raphael Engesser and Wolfgang Mader and Tim Heinemann and Jan Hasenauer and Marcel Schilling and Thomas H{\"{o}}fer and Edda Klipp and Fabian J. Theis and Ursula Klingm{\"{u}}ller and Birgit Schoeberl and Jens Timmer}, title = {Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems}, journal = {Bioinform.}, volume = {31}, number = {21}, pages = {3558--3560}, year = {2015}, url = {https://doi.org/10.1093/bioinformatics/btv405}, doi = {10.1093/BIOINFORMATICS/BTV405}, timestamp = {Sat, 10 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/RaueSSKMHVTAEMH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/LoosMTH15, author = {Carolin Loos and Carsten Marr and Fabian J. Theis and Jan Hasenauer}, editor = {Olivier F. Roux and J{\'{e}}r{\'{e}}mie Bourdon}, title = {Approximate Bayesian Computation for Stochastic Single-Cell Time-Lapse Data Using Multivariate Test Statistics}, booktitle = {Computational Methods in Systems Biology - 13th International Conference, {CMSB} 2015, Nantes, France, September 16-18, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9308}, pages = {52--63}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-23401-4\_6}, doi = {10.1007/978-3-319-23401-4\_6}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/LoosMTH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/HasenauerHHT14, author = {Jan Hasenauer and Christine Hasenauer and Tim Hucho and Fabian J. Theis}, title = {{ODE} Constrained Mixture Modelling: {A} Method for Unraveling Subpopulation Structures and Dynamics}, journal = {PLoS Comput. Biol.}, volume = {10}, number = {7}, year = {2014}, url = {https://doi.org/10.1371/journal.pcbi.1003686}, doi = {10.1371/JOURNAL.PCBI.1003686}, timestamp = {Thu, 10 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/HasenauerHHT14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/FrohlichTH14, author = {Fabian Fr{\"{o}}hlich and Fabian J. Theis and Jan Hasenauer}, editor = {Pedro Mendes and Joseph O. Dada and Kieran Smallbone}, title = {Uncertainty Analysis for Non-identifiable Dynamical Systems: Profile Likelihoods, Bootstrapping and More}, booktitle = {Computational Methods in Systems Biology - 12th International Conference, {CMSB} 2014, Manchester, UK, November 17-19, 2014, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8859}, pages = {61--72}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-12982-2\_5}, doi = {10.1007/978-3-319-12982-2\_5}, timestamp = {Sat, 09 Apr 2022 12:36:34 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/FrohlichTH14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/FrohlichHTH14, author = {Fabian Fr{\"{o}}hlich and Sabrina Hross and Fabian J. Theis and Jan Hasenauer}, editor = {Pedro Mendes and Joseph O. Dada and Kieran Smallbone}, title = {Radial Basis Function Approximations of Bayesian Parameter Posterior Densities for Uncertainty Analysis}, booktitle = {Computational Methods in Systems Biology - 12th International Conference, {CMSB} 2014, Manchester, UK, November 17-19, 2014, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8859}, pages = {73--85}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-12982-2\_6}, doi = {10.1007/978-3-319-12982-2\_6}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/FrohlichHTH14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HockHT13, author = {Sabrina Hock and Jan Hasenauer and Fabian J. Theis}, title = {Modeling of 2D diffusion processes based on microscopy data: parameter estimation and practical identifiability analysis}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-10}}, pages = {S7}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S10-S7}, doi = {10.1186/1471-2105-14-S10-S7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HockHT13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/VehlowHKRHTRTW13, author = {Corinna Vehlow and Jan Hasenauer and Andrei Kramer and Andreas Raue and Sabine Hug and Jens Timmer and Nicole Radde and Fabian J. Theis and Daniel Weiskopf}, title = {iVUN: interactive Visualization of Uncertain biochemical reaction Networks}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-19}}, pages = {S2}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S19-S2}, doi = {10.1186/1471-2105-14-S19-S2}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/VehlowHKRHTRTW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/HockNHWLTWPT13, author = {Sabrina Hock and Yen{-}Kar Ng and Jan Hasenauer and Dominik M. Wittmann and Dominik Lutter and Dietrich Tr{\"{u}}mbach and Wolfgang Wurst and Nilima Prakash and Fabian J. Theis}, title = {Sharpening of expression domains induced by transcription and microRNA regulation within a spatio-temporal model of mid-hindbrain boundary formation}, journal = {{BMC} Syst. Biol.}, volume = {7}, pages = {48}, year = {2013}, url = {https://doi.org/10.1186/1752-0509-7-48}, doi = {10.1186/1752-0509-7-48}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcsb/HockNHWLTWPT13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apvis/VehlowHTW13, author = {Corinna Vehlow and Jan Hasenauer and Fabian J. Theis and Daniel Weiskopf}, editor = {Sheelagh Carpendale and Wei Chen and Seok{-}Hee Hong}, title = {Visualizing edge-edge relations in graphs}, booktitle = {{IEEE} Pacific Visualization Symposium, PacificVis 2013, February 27 2013-March 1, 2013, Sydney, NSW, Australia}, pages = {201--208}, publisher = {{IEEE} Computer Society}, year = {2013}, url = {https://doi.org/10.1109/PacificVis.2013.6596146}, doi = {10.1109/PACIFICVIS.2013.6596146}, timestamp = {Thu, 27 Apr 2023 14:57:18 +0200}, biburl = {https://dblp.org/rec/conf/apvis/VehlowHTW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ejbsb/HasenauerHDSWA12, author = {Jan Hasenauer and Julian Heinrich and Malgorzata Doszczak and Peter Scheurich and Daniel Weiskopf and Frank Allg{\"{o}}wer}, title = {A visual analytics approach for models of heterogeneous cell populations}, journal = {{EURASIP} J. Bioinform. Syst. Biol.}, volume = {2012}, pages = {4}, year = {2012}, url = {https://doi.org/10.1186/1687-4153-2012-4}, doi = {10.1186/1687-4153-2012-4}, timestamp = {Thu, 18 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ejbsb/HasenauerHDSWA12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biovis/VehlowHKHRAW12, author = {Corinna Vehlow and Jan Hasenauer and Andrei Kramer and Julian Heinrich and Nicole Radde and Frank Allg{\"{o}}wer and Daniel Weiskopf}, title = {Uncertainty-aware visual analysis of biochemical reaction networks}, booktitle = {2012 {IEEE} Symposium on Biological Data Visualization, BioVis 2011, Seattle, WA, USA, October 14-15, 2012}, pages = {91--98}, publisher = {{IEEE} Computer Society}, year = {2012}, url = {https://doi.org/10.1109/BioVis.2012.6378598}, doi = {10.1109/BIOVIS.2012.6378598}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biovis/VehlowHKHRAW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HasenauerWDRSA11, author = {Jan Hasenauer and Steffen Waldherr and Malgorzata Doszczak and Nicole Radde and Peter Scheurich and Frank Allg{\"{o}}wer}, title = {Identification of models of heterogeneous cell populations from population snapshot data}, journal = {{BMC} Bioinform.}, volume = {12}, pages = {125}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-125}, doi = {10.1186/1471-2105-12-125}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HasenauerWDRSA11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cdc/LohningHA11, author = {Martin L{\"{o}}hning and Jan Hasenauer and Frank Allg{\"{o}}wer}, title = {Steady state stability preserving nonlinear model reduction using sequential convex optimization}, booktitle = {50th {IEEE} Conference on Decision and Control and European Control Conference, 11th European Control Conference, {CDC/ECC} 2011, Orlando, FL, USA, December 12-15, 2011}, pages = {7158--7163}, publisher = {{IEEE}}, year = {2011}, url = {https://doi.org/10.1109/CDC.2011.6161227}, doi = {10.1109/CDC.2011.6161227}, timestamp = {Tue, 25 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cdc/LohningHA11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/IEEEcca/KramerHAR10, author = {Andrei Kramer and Jan Hasenauer and Frank Allg{\"{o}}wer and Nicole Radde}, title = {Computation of the Posterior Entropy in a Bayesian Framework for Parameter Estimation in Biological Networks}, booktitle = {Proceedings of the {IEEE} International Conference on Control Applications, {CCA} 2010, Yokohama, Japan, September 8-10, 2010}, pages = {493--498}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/CCA.2010.5611198}, doi = {10.1109/CCA.2010.5611198}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/IEEEcca/KramerHAR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cdc/HasenauerBWA10, author = {Jan Hasenauer and Christian Breindl and Steffen Waldherr and Frank Allg{\"{o}}wer}, title = {Approximative classification of regions in parameter spaces of nonlinear ODEs yielding different qualitative behavior}, booktitle = {Proceedings of the 49th {IEEE} Conference on Decision and Control, {CDC} 2010, December 15-17, 2010, Atlanta, Georgia, {USA}}, pages = {4114--4119}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/CDC.2010.5718044}, doi = {10.1109/CDC.2010.5718044}, timestamp = {Fri, 04 Mar 2022 13:28:01 +0100}, biburl = {https://dblp.org/rec/conf/cdc/HasenauerBWA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:journals/procedia/HasenauerWRDSA10, author = {Jan Hasenauer and Steffen Waldherr and Nicole Radde and Malgorzata Doszczak and Peter Scheurich and Frank Allg{\"{o}}wer}, editor = {Peter M. A. Sloot and G. Dick van Albada and Jack J. Dongarra}, title = {A maximum likelihood estimator for parameter distributions in heterogeneous cell populations}, booktitle = {Proceedings of the International Conference on Computational Science, {ICCS} 2010, University of Amsterdam, The Netherlands, May 31 - June 2, 2010}, series = {Procedia Computer Science}, volume = {1}, number = {1}, pages = {1655--1663}, publisher = {Elsevier}, year = {2010}, url = {https://doi.org/10.1016/j.procs.2010.04.185}, doi = {10.1016/J.PROCS.2010.04.185}, timestamp = {Wed, 27 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/procedia/HasenauerWRDSA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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