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BibTeX records: Etienne Z. Gnimpieba
@article{DBLP:journals/cluster/BomgniMAZG23, author = {Alain Bertrand Bomgni and Garrik Brel Jagho Mdemaya and Hafiz Munsub Ali and David R. Gnimpieba Zanfack and Etienne Z. Gnimpieba}, title = {{ESPINA:} efficient and secured protocol for emerging IoT network applications}, journal = {Clust. Comput.}, volume = {26}, number = {1}, pages = {85--98}, year = {2023}, url = {https://doi.org/10.1007/s10586-021-03493-z}, doi = {10.1007/S10586-021-03493-Z}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cluster/BomgniMAZG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cluster/MtopiBAZEDG23, author = {Yann Brice Chebu Mtopi and Alain Bertrand Bomgni and Hafiz Munsub Ali and David R. Gnimpieba Zanfack and Waleed Ejaz and Cl{\'{e}}mentin Tayou Djam{\'{e}}gni and Etienne Zohim Gnimpieba}, title = {MultiHop optimal time complexity clustering for emerging IoT applications}, journal = {Clust. Comput.}, volume = {26}, number = {2}, pages = {993--1009}, year = {2023}, url = {https://doi.org/10.1007/s10586-022-03637-9}, doi = {10.1007/S10586-022-03637-9}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cluster/MtopiBAZEDG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/BomgniAGNGG23, author = {Alain Bertrand Bomgni and Dialo Abdala and Bichar Dip Shrestha Gurung and Marcellin Julius Antonio Nkenlifack and Venkataramana Gadhamshetty and Etienne Z. Gnimpieba}, editor = {Xingpeng Jiang and Haiying Wang and Reda Alhajj and Xiaohua Hu and Felix Engel and Mufti Mahmud and Nadia Pisanti and Xuefeng Cui and Hong Song}, title = {Fine-tuning a pre-trained Transformers-based model for gene name entity recognition in biomedical text using a customized dataset: case of Desulfovibrio vulgaris Hildenborough}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023}, pages = {4473--4479}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBM58861.2023.10385403}, doi = {10.1109/BIBM58861.2023.10385403}, timestamp = {Thu, 14 Mar 2024 16:59:09 +0100}, biburl = {https://dblp.org/rec/conf/bibm/BomgniAGNGG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/BomgniNANGG23, author = {Alain Bertrand Bomgni and Claude Epiphanie Mbotchack Ngale and Shiva Aryal and Marcellin Julius Antonio Nkenlifack and Venkataramana Gadhamshetty and Etienne Z. Gnimpieba}, editor = {Xingpeng Jiang and Haiying Wang and Reda Alhajj and Xiaohua Hu and Felix Engel and Mufti Mahmud and Nadia Pisanti and Xuefeng Cui and Hong Song}, title = {{NLPADADE:} Leveraging Natural Language Processing for Automated Detection of Adverse Drug Effects}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023}, pages = {4480--4487}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBM58861.2023.10385626}, doi = {10.1109/BIBM58861.2023.10385626}, timestamp = {Mon, 12 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/BomgniNANGG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/DevadigGGJG23, author = {Ramesh Devadig and Bichar Dip Shrestha Gurung and Etienne Z. Gnimpieba and Bharath Jasthi and Venkataramana Gadhamshetty}, editor = {Xingpeng Jiang and Haiying Wang and Reda Alhajj and Xiaohua Hu and Felix Engel and Mufti Mahmud and Nadia Pisanti and Xuefeng Cui and Hong Song}, title = {Computational methods for biofouling and corrosion-resistant graphene nanocomposites. {A} transdisciplinary approach}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023}, pages = {4494--4496}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBM58861.2023.10385810}, doi = {10.1109/BIBM58861.2023.10385810}, timestamp = {Mon, 12 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/DevadigGGJG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/DoGAKCGLG23, author = {Tuyen Do and Bichar Dip Shrestha Gurung and Shiva Aryal and Anup Khanal and Sandeep Chataut and Venkataramana Gadhamshetty and Carol Lushbough and Etienne Z. Gnimpieba}, editor = {Xingpeng Jiang and Haiying Wang and Reda Alhajj and Xiaohua Hu and Felix Engel and Mufti Mahmud and Nadia Pisanti and Xuefeng Cui and Hong Song}, title = {Utilizing XGBoost for the Prediction of Material Corrosion Rates from Embedded Tabular Data using Large Language Model}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023}, pages = {4497--4499}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBM58861.2023.10385544}, doi = {10.1109/BIBM58861.2023.10385544}, timestamp = {Thu, 21 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/DoGAKCGLG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/GurungKHDCLGG23, author = {Bichar Dip Shrestha Gurung and Anup Khanal and Timothy W. Hartman and Tuyen Do and Sandeep Chataut and Carol Lushbough and Venkataramana Gadhamshetty and Etienne Z. Gnimpieba}, editor = {Xingpeng Jiang and Haiying Wang and Reda Alhajj and Xiaohua Hu and Felix Engel and Mufti Mahmud and Nadia Pisanti and Xuefeng Cui and Hong Song}, title = {Transformer in Microbial Image Analysis: {A} Comparative Exploration of TransUNet, UNet, and DoubleUNet for {SEM} Image Segmentation}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023}, pages = {4500--4502}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBM58861.2023.10385974}, doi = {10.1109/BIBM58861.2023.10385974}, timestamp = {Thu, 21 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/GurungKHDCLGG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/HaasGHDG23, author = {Sam Haas and Bichar Dip Shrestha Gurung and Timothy W. Hartman and Tuyen Do and Etienne Z. Gnimpieba}, editor = {Xingpeng Jiang and Haiying Wang and Reda Alhajj and Xiaohua Hu and Felix Engel and Mufti Mahmud and Nadia Pisanti and Xuefeng Cui and Hong Song}, title = {{SIMPL} - An Application for Cell and Microbe Tracking Using Machine Learning}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023}, pages = {4503--4505}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBM58861.2023.10385433}, doi = {10.1109/BIBM58861.2023.10385433}, timestamp = {Thu, 21 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/HaasGHDG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/SinghGS23, author = {Ram Nageena Singh and Etienne Z. Gnimpieba and Rajesh Kumar Sani}, editor = {Xingpeng Jiang and Haiying Wang and Reda Alhajj and Xiaohua Hu and Felix Engel and Mufti Mahmud and Nadia Pisanti and Xuefeng Cui and Hong Song}, title = {Genome wide computational prediction and analysis of noncoding genome of corrosive biofilm forming Oleidesulfovibrio alaskensis {G20}}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023}, pages = {4509--4512}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBM58861.2023.10386063}, doi = {10.1109/BIBM58861.2023.10386063}, timestamp = {Mon, 12 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/SinghGS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/BomgniFWSLG22, author = {Alain Bertrand Bomgni and Ernest Basile Fotseu Fotseu and Daril Raoul Kengne Wambo and Rajesh Kumar Sani and Carol Lushbough and Etienne Z. Gnimpieba}, editor = {Donald A. Adjeroh and Qi Long and Xinghua Mindy Shi and Fei Guo and Xiaohua Hu and Srinivas Aluru and Giri Narasimhan and Jianxin Wang and Mingon Kang and Ananda Mondal and Jin Liu}, title = {Attention model-based and multi-organism driven gene recognition from text: application to a microbial biofilm organism set}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022}, pages = {3596--3598}, publisher = {{IEEE}}, year = {2022}, url = {https://doi.org/10.1109/BIBM55620.2022.9995269}, doi = {10.1109/BIBM55620.2022.9995269}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/BomgniFWSLG22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/GurungDDGG22, author = {Bichar Dip Shrestha Gurung and Ramesh Devadig and Tuyen Do and Venkataramana Gadhamshetty and Etienne Z. Gnimpieba}, editor = {Donald A. Adjeroh and Qi Long and Xinghua Mindy Shi and Fei Guo and Xiaohua Hu and Srinivas Aluru and Giri Narasimhan and Jianxin Wang and Mingon Kang and Ananda Mondal and Jin Liu}, title = {U-Net Based Image Segmentation Techniques for Development of Non-Biocidal Fouling-Resistant Ultra-Thin Two-dimensional {(2D)} Coatings}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022}, pages = {3602--3604}, publisher = {{IEEE}}, year = {2022}, url = {https://doi.org/10.1109/BIBM55620.2022.9995609}, doi = {10.1109/BIBM55620.2022.9995609}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/GurungDDGG22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/HaasHGDSGG22, author = {Sam Haas and Timothy W. Hartman and Bichar Dip Shrestha Gurung and Tuyen Do and Rajesh Kumar Sani and Venkataramana Gadhamshetty and Etienne Z. Gnimpieba}, editor = {Donald A. Adjeroh and Qi Long and Xinghua Mindy Shi and Fei Guo and Xiaohua Hu and Srinivas Aluru and Giri Narasimhan and Jianxin Wang and Mingon Kang and Ananda Mondal and Jin Liu}, title = {Using {BASIN-ML} for Machine Learning-Based Statistical Analysis and Reporting for Biofilm Datasets}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022}, pages = {3605--3607}, publisher = {{IEEE}}, year = {2022}, url = {https://doi.org/10.1109/BIBM55620.2022.9995185}, doi = {10.1109/BIBM55620.2022.9995185}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/HaasHGDSGG22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/SinghGS22, author = {Ram Nageena Singh and Etienne Z. Gnimpieba and Rajesh Kumar Sani}, editor = {Donald A. Adjeroh and Qi Long and Xinghua Mindy Shi and Fei Guo and Xiaohua Hu and Srinivas Aluru and Giri Narasimhan and Jianxin Wang and Mingon Kang and Ananda Mondal and Jin Liu}, title = {Title: Challenges in single cells sequencing Microbial community and biofilm: {A} case of Oleidesulfovibrio alaskensis {G20} {NGS} protocol}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022}, pages = {3613--3615}, publisher = {{IEEE}}, year = {2022}, url = {https://doi.org/10.1109/BIBM55620.2022.9995610}, doi = {10.1109/BIBM55620.2022.9995610}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/SinghGS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/FotseuNSGGB21, author = {Ernest Basile Fotseu Fotseu and Thierry Kongne Nembot and Rajesh Kumar Sani and Venkataramana Gadhamshetty and Etienne Z. Gnimpieba and Alain Bertrand Bomgni}, editor = {Yufei Huang and Lukasz A. Kurgan and Feng Luo and Xiaohua Hu and Yidong Chen and Edward R. Dougherty and Andrzej Kloczkowski and Yaohang Li}, title = {GenNER - {A} highly scalable and optimal {NER} method for text-based gene and protein recognition}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2021, Houston, TX, USA, December 9-12, 2021}, pages = {3562--3569}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BIBM52615.2021.9669827}, doi = {10.1109/BIBM52615.2021.9669827}, timestamp = {Fri, 01 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/FotseuNSGGB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/GasperMGGGC21, author = {William Gasper and Jiahao Ma and Dario Ghersi and Etienne Z. Gnimpieba and Venkataramana Gadhamshetty and Parvathi Chundi}, editor = {Yufei Huang and Lukasz A. Kurgan and Feng Luo and Xiaohua Hu and Yidong Chen and Edward R. Dougherty and Andrzej Kloczkowski and Yaohang Li}, title = {Automatic Extension of Medical Subject Headings (MeSH) Thesaurus to Emerging Research}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2021, Houston, TX, USA, December 9-12, 2021}, pages = {3570--3577}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BIBM52615.2021.9669520}, doi = {10.1109/BIBM52615.2021.9669520}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/GasperMGGGC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/NembotFSGLB21, author = {Thierry Kongne Nembot and Ernest Basile Fotseu Fotseu and Rajesh Kumar Sani and Etienne Z. Gnimpieba and Carol Lushbough and Alain Bertrand Bomgni}, editor = {Yufei Huang and Lukasz A. Kurgan and Feng Luo and Xiaohua Hu and Yidong Chen and Edward R. Dougherty and Andrzej Kloczkowski and Yaohang Li}, title = {Prediction of essential genes in {G20} using machine learning model}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2021, Houston, TX, USA, December 9-12, 2021}, pages = {3578--3582}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BIBM52615.2021.9669756}, doi = {10.1109/BIBM52615.2021.9669756}, timestamp = {Fri, 01 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/NembotFSGLB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/SaxenaTTRGSOGS21, author = {Priya Saxena and Abhilash Kumar Tripathi and Payal Thakur and Shailabh Rauniyar and Vinoj Gopalakrishnan and Ram Nageena Singh and Mathew A. Olakunle and Etienne Z. Gnimpieba and Rajesh Kumar Sani}, editor = {Yufei Huang and Lukasz A. Kurgan and Feng Luo and Xiaohua Hu and Yidong Chen and Edward R. Dougherty and Andrzej Kloczkowski and Yaohang Li}, title = {Integration of text mining and biological network analysis to access essential genes in Desulfovibrio alaskensis {G20}}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2021, Houston, TX, USA, December 9-12, 2021}, pages = {3583--3585}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BIBM52615.2021.9669712}, doi = {10.1109/BIBM52615.2021.9669712}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/SaxenaTTRGSOGS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/ThakurRTSGSOGS21, author = {Payal Thakur and Shailabh Rauniyar and Abhilash Kumar Tripathi and Priya Saxena and Vinoj Gopalakrishnan and Ram Nageena Singh and Mathew A. Olakunle and Etienne Z. Gnimpieba and Rajesh Kumar Sani}, editor = {Yufei Huang and Lukasz A. Kurgan and Feng Luo and Xiaohua Hu and Yidong Chen and Edward R. Dougherty and Andrzej Kloczkowski and Yaohang Li}, title = {Identifying genes involved in biocorrosion from the literature using text-mining}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2021, Houston, TX, USA, December 9-12, 2021}, pages = {3586--3588}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BIBM52615.2021.9669354}, doi = {10.1109/BIBM52615.2021.9669354}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/ThakurRTSGSOGS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/TripathiSTRGSOG21, author = {Abhilash Kumar Tripathi and Priya Saxena and Payal Thakur and Shailabh Rauniyar and Vinoj Gopalakrishnan and Ram Nageena Singh and Mathew A. Olakunle and Etienne Z. Gnimpieba and Rajesh Kumar Sani}, editor = {Yufei Huang and Lukasz A. Kurgan and Feng Luo and Xiaohua Hu and Yidong Chen and Edward R. Dougherty and Andrzej Kloczkowski and Yaohang Li}, title = {Discovery of genes associated with sulfate-reducing bacteria biofilm using text mining and biological network analysis}, booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2021, Houston, TX, USA, December 9-12, 2021}, pages = {3589--3591}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BIBM52615.2021.9669374}, doi = {10.1109/BIBM52615.2021.9669374}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bibm/TripathiSTRGSOG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GnimpiebaVGCL17, author = {Etienne Z. Gnimpieba and Menno S. VanDiermen and Shayla M. Gustafson and Bill Conn and Carol M. Lushbough}, title = {Bio-TDS: bioscience query tool discovery system}, journal = {Nucleic Acids Res.}, volume = {45}, number = {Database-Issue}, pages = {D1117--D1122}, year = {2017}, url = {https://doi.org/10.1093/nar/gkw940}, doi = {10.1093/NAR/GKW940}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GnimpiebaVGCL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/HoffmanMMBG17, author = {Mariah M. Hoffman and Carrie J. Minette and Shanta M. Messerli and Ratan D. Bhardwaj and Etienne Z. Gnimpieba}, editor = {Xiaohua Hu and Chi{-}Ren Shyu and Yana Bromberg and Jean Gao and Yang Gong and Dmitry Korkin and Illhoi Yoo and Huiru Jane Zheng}, title = {NanoStringBioNet: Integrated {R} framework for bioscience knowledge discovery from NanoString nCounter data}, booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017}, pages = {2157--2162}, publisher = {{IEEE} Computer Society}, year = {2017}, url = {https://doi.org/10.1109/BIBM.2017.8217992}, doi = {10.1109/BIBM.2017.8217992}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/HoffmanMMBG17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/concurrency/LushboughGD15, author = {Carol M. Lushbough and Etienne Z. Gnimpieba and Rion Dooley}, title = {Life science data analysis workflow development using the bioextract server leveraging the iPlant collaborative cyberinfrastructure}, journal = {Concurr. Comput. Pract. Exp.}, volume = {27}, number = {2}, pages = {408--419}, year = {2015}, url = {https://doi.org/10.1002/cpe.3237}, doi = {10.1002/CPE.3237}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/concurrency/LushboughGD15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/GnimpiebaTCCL15, author = {Etienne Z. Gnimpieba and Mathialakan Thavappiragasam and Abalo Chango and Bill Conn and Carol M. Lushbough}, editor = {Olivier F. Roux and J{\'{e}}r{\'{e}}mie Bourdon}, title = {SBMLDock: Docker Driven Systems Biology Tool Development and Usage}, booktitle = {Computational Methods in Systems Biology - 13th International Conference, {CMSB} 2015, Nantes, France, September 16-18, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9308}, pages = {282--285}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-23401-4\_24}, doi = {10.1007/978-3-319-23401-4\_24}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cmsb/GnimpiebaTCCL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/GnimpiebaCL14, author = {Etienne Z. Gnimpieba and Abalo Chango and Carol M. Lushbough}, editor = {Pierre Baldi and Wei Wang}, title = {RNA-seq gene and transcript expression analysis using the BioExtract server and iPlant collaborative}, booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational Biology, and Health Informatics, {BCB} '14, Newport Beach, California, USA, September 20-23, 2014}, pages = {661--669}, publisher = {{ACM}}, year = {2014}, url = {https://doi.org/10.1145/2649387.2660822}, doi = {10.1145/2649387.2660822}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bcb/GnimpiebaCL14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/Thavappiragasam14, author = {Mathialakan Thavappiragasam and Carol M. Lushbough and Etienne Z. Gnimpieba}, editor = {Pierre Baldi and Wei Wang}, title = {Heuristic parallelizable algorithm for similarity based biosystems comparison}, booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational Biology, and Health Informatics, {BCB} '14, Newport Beach, California, USA, September 20-23, 2014}, pages = {782--789}, publisher = {{ACM}}, year = {2014}, url = {https://doi.org/10.1145/2649387.2660849}, doi = {10.1145/2649387.2660849}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bcb/Thavappiragasam14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/Thavappiragasam14a, author = {Mathialakan Thavappiragasam and Carol M. Lushbough and Etienne Z. Gnimpieba}, editor = {Pierre Baldi and Wei Wang}, title = {Automatic biosystems comparison using semantic and name similarity}, booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational Biology, and Health Informatics, {BCB} '14, Newport Beach, California, USA, September 20-23, 2014}, pages = {790--796}, publisher = {{ACM}}, year = {2014}, url = {https://doi.org/10.1145/2649387.2660850}, doi = {10.1145/2649387.2660850}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bcb/Thavappiragasam14a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/WeinandtJGL14, author = {Nick Weinandt and Laura M. Jackson and Etienne Z. Gnimpieba and Carol Lushbough}, editor = {Pierre Baldi and Wei Wang}, title = {Pheno2GRN: a workflow for phenotype to gene network study and reverse engineering comparison}, booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational Biology, and Health Informatics, {BCB} '14, Newport Beach, California, USA, September 20-23, 2014}, pages = {797--804}, publisher = {{ACM}}, year = {2014}, url = {https://doi.org/10.1145/2649387.2660851}, doi = {10.1145/2649387.2660851}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bcb/WeinandtJGL14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cluster/LushboughGD13, author = {Carol Lushbough and Etienne Z. Gnimpieba and Rion Dooley}, title = {BioExtract Server, a Web-based workflow enabling system, leveraging iPlant collaborative resources}, booktitle = {2013 {IEEE} International Conference on Cluster Computing, {CLUSTER} 2013, Indianapolis, IN, USA, September 23-27, 2013}, pages = {1--3}, publisher = {{IEEE} Computer Society}, year = {2013}, url = {https://doi.org/10.1109/CLUSTER.2013.6702692}, doi = {10.1109/CLUSTER.2013.6702692}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cluster/LushboughGD13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/GnimpiebaJFL13, author = {Etienne Z. Gnimpieba and Douglas M. Jennewein and Luke Fuhrman and Carol Lushbough}, title = {Bioinformatics Knowledge Transmission (training, learning, and teaching): overview and flexible comparison of computer based training approaches}, journal = {CoRR}, volume = {abs/1310.8383}, year = {2013}, url = {http://arxiv.org/abs/1310.8383}, eprinttype = {arXiv}, eprint = {1310.8383}, timestamp = {Thu, 23 Sep 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/GnimpiebaJFL13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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