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ORCIDBibTeX records: Yasser El-Manzalawy
@article{DBLP:journals/midm/El-ManzalawyAHC21,
author = {Yasser El{-}Manzalawy and
Mostafa M. Abbas and
Ian Hoaglund and
Alvaro Ulloa Cerna and
Thomas B. Morland and
Christopher M. Haggerty and
Eric S. Hall and
Brandon K. Fornwalt},
title = {{OASIS} +: leveraging machine learning to improve the prognostic accuracy
of {OASIS} severity score for predicting in-hospital mortality},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {21},
number = {1},
pages = {156},
year = {2021},
url = {https://doi.org/10.1186/s12911-021-01517-7},
doi = {10.1186/S12911-021-01517-7},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/El-ManzalawyAHC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/MattaDHYKEO21,
author = {John Matta and
Daniel Dobrino and
Swade Howard and
Dacosta Yeboah and
Jonathan Kopel and
Yasser El{-}Manzalawy and
Tayo Obafemi{-}Ajayi},
title = {A PheWAS Model of Autism Spectrum Disorder},
booktitle = {43rd Annual International Conference of the {IEEE} Engineering in
Medicine {\&} Biology Society, {EMBC} 2021, Mexico, November 1-5,
2021},
pages = {2110--2114},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/EMBC46164.2021.9629533},
doi = {10.1109/EMBC46164.2021.9629533},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/embc/MattaDHYKEO21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HassounEGKR19,
author = {Soha Hassoun and
Yasser El{-}Manzalawy and
Georg Gerber and
David Koslicki and
Gail Rosen},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Workshop on Microbiomics, Metagenomics, and Metabolomics},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {618},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343860},
doi = {10.1145/3307339.3343860},
timestamp = {Wed, 18 Sep 2019 17:06:08 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HassounEGKR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbbasLBHE18,
author = {Mostafa M. Abbas and
Thanh Le and
Halima Bensmail and
Vasant G. Honavar and
Yasser El{-}Manzalawy},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Microbiomarkers Discovery in Inflammatory Bowel Diseases using Network-Based
Feature Selection},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {172--177},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233602},
doi = {10.1145/3233547.3233602},
timestamp = {Tue, 06 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AbbasLBHE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bhi/KhademiEBH18,
author = {Aria Khademi and
Yasser El{-}Manzalawy and
Orfeu M. Buxton and
Vasant G. Honavar},
title = {Toward personalized sleep-wake prediction from actigraphy},
booktitle = {2018 {IEEE} {EMBS} International Conference on Biomedical {\&}
Health Informatics, {BHI} 2018, Las Vegas, NV, USA, March 4-7, 2018},
pages = {414--417},
publisher = {{IEEE}},
year = {2018},
url = {https://doi.org/10.1109/BHI.2018.8333456},
doi = {10.1109/BHI.2018.8333456},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bhi/KhademiEBH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibcb/El-Manzalawy18,
author = {Yasser El{-}Manzalawy},
title = {{CCA} based multi-view feature selection for multi-omics data integration},
booktitle = {2018 {IEEE} Conference on Computational Intelligence in Bioinformatics
and Computational Biology, {CIBCB} 2018, Saint Louis, MO, USA, May
30 - June 2, 2018},
pages = {1--8},
publisher = {{IEEE}},
year = {2018},
url = {https://doi.org/10.1109/CIBCB.2018.8404968},
doi = {10.1109/CIBCB.2018.8404968},
timestamp = {Wed, 16 Oct 2019 14:14:48 +0200},
biburl = {https://dblp.org/rec/conf/cibcb/El-Manzalawy18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ideal/HsiehESH18,
author = {Tsung{-}Yu Hsieh and
Yasser El{-}Manzalawy and
Yiwei Sun and
Vasant G. Honavar},
editor = {Hujun Yin and
David Camacho and
Paulo Novais and
Antonio J. Tall{\'{o}}n{-}Ballesteros},
title = {Compositional Stochastic Average Gradient for Machine Learning and
Related Applications},
booktitle = {Intelligent Data Engineering and Automated Learning - {IDEAL} 2018
- 19th International Conference, Madrid, Spain, November 21-23, 2018,
Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {11314},
pages = {740--752},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-03493-1\_77},
doi = {10.1007/978-3-030-03493-1\_77},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ideal/HsiehESH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1809-01225,
author = {Tsung{-}Yu Hsieh and
Yasser El{-}Manzalawy and
Yiwei Sun and
Vasant G. Honavar},
title = {Compositional Stochastic Average Gradient for Machine Learning and
Related Applications},
journal = {CoRR},
volume = {abs/1809.01225},
year = {2018},
url = {http://arxiv.org/abs/1809.01225},
eprinttype = {arXiv},
eprint = {1809.01225},
timestamp = {Fri, 05 Oct 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1809-01225.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbbasE17,
author = {Mostafa M. Abbas and
Yasser El{-}Manzalawy},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Predictive and Comparative Network Analysis of the Gut Microbiota
in Type 2 Diabetes},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {313--320},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107472},
doi = {10.1145/3107411.3107472},
timestamp = {Tue, 06 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AbbasE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/El-ManzalawyBH17,
author = {Yasser El{-}Manzalawy and
Orfeu M. Buxton and
Vasant G. Honavar},
editor = {Xiaohua Hu and
Chi{-}Ren Shyu and
Yana Bromberg and
Jean Gao and
Yang Gong and
Dmitry Korkin and
Illhoi Yoo and
Huiru Jane Zheng},
title = {Sleep/wake state prediction and sleep parameter estimation using unsupervised
classification via clustering},
booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
pages = {718--723},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/BIBM.2017.8217742},
doi = {10.1109/BIBM.2017.8217742},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/El-ManzalawyBH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JordanEDH12,
author = {Rafael A. Jordan and
Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
title = {Predicting protein-protein interface residues using local surface
structural similarity},
journal = {{BMC} Bioinform.},
volume = {13},
pages = {41},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-41},
doi = {10.1186/1471-2105-13-41},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JordanEDH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WaliaCLTTEDH12,
author = {Rasna R. Walia and
Cornelia Caragea and
Benjamin A. Lewis and
Fadi Towfic and
Michael Terribilini and
Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
title = {Protein-RNA interface residue prediction using machine learning: an
assessment of the state of the art},
journal = {{BMC} Bioinform.},
volume = {13},
pages = {89},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-89},
doi = {10.1186/1471-2105-13-89},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WaliaCLTTEDH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/El-ManzalawyDH12,
author = {Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Predicting protective bacterial antigens using random forest classifiers},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {426--433},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382991},
doi = {10.1145/2382936.2382991},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/El-ManzalawyDH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/El-ManzalawyDH11,
author = {Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
title = {Predicting {MHC-II} Binding Affinity Using Multiple Instance Regression},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {8},
number = {4},
pages = {1067--1079},
year = {2011},
url = {https://doi.org/10.1109/TCBB.2010.94},
doi = {10.1109/TCBB.2010.94},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/El-ManzalawyDH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XueJEDH11,
author = {Li C. Xue and
Rafael A. Jordan and
Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
editor = {Robert Grossman and
Andrey Rzhetsky and
Sun Kim and
Wei Wang},
title = {Ranking docked models of protein-protein complexes using predicted
partner-specific protein-protein interfaces: a preliminary study},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 11, Chicago, IL, {USA} - July 31 - August 03,
2011},
pages = {441--445},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2147805.2147866},
doi = {10.1145/2147805.2147866},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XueJEDH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XueWEDH11,
author = {Li C. Xue and
Rasna R. Walia and
Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
editor = {Robert Grossman and
Andrey Rzhetsky and
Sun Kim and
Wei Wang},
title = {Improving protein-RNA interface prediction by combining sequence homology
based method with a naive Bayes classifier: preliminary results},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 11, Chicago, IL, {USA} - July 31 - August 03,
2011},
pages = {556--558},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2147805.2147899},
doi = {10.1145/2147805.2147899},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XueWEDH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/El-ManzalawyH10,
author = {Yasser El{-}Manzalawy and
Vasant G. Honavar},
editor = {Aidong Zhang and
Mark Borodovsky and
Gultekin {\"{O}}zsoyoglu and
Armin R. Mikler},
title = {A framework for developing epitope prediction tools},
booktitle = {Proceedings of the First {ACM} International Conference on Bioinformatics
and Computational Biology, {BCB} 2010, Niagara Falls, NY, USA, August
2-4, 2010},
pages = {660--662},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1854776.1854906},
doi = {10.1145/1854776.1854906},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/El-ManzalawyH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dis/EL-ManzalawyH09,
author = {Yasser El{-}Manzalawy and
Vasant G. Honavar},
editor = {Jo{\~{a}}o Gama and
V{\'{\i}}tor Santos Costa and
Al{\'{\i}}pio M{\'{a}}rio Jorge and
Pavel Brazdil},
title = {{MICCLLR:} Multiple-Instance Learning Using Class Conditional Log
Likelihood Ratio},
booktitle = {Discovery Science, 12th International Conference, {DS} 2009, Porto,
Portugal, October 3-5, 2009},
series = {Lecture Notes in Computer Science},
volume = {5808},
pages = {80--91},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04747-3\_9},
doi = {10.1007/978-3-642-04747-3\_9},
timestamp = {Mon, 30 Nov 2020 08:47:30 +0100},
biburl = {https://dblp.org/rec/conf/dis/EL-ManzalawyH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/El-ManzalawyDH08,
author = {Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
editor = {Xue{-}wen Chen and
Xiaohua Hu and
Sun Kim},
title = {Predicting Protective Linear B-Cell Epitopes Using Evolutionary Information},
booktitle = {2008 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2008, Philadephia, Pennsylvania, USA, November 3-5, 2008},
pages = {289--292},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/BIBM.2008.80},
doi = {10.1109/BIBM.2008.80},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/El-ManzalawyDH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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