BibTeX records: John Chilton

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@article{DBLP:journals/cacm/CrusoeAIACTMSGG22,
  author       = {Michael R. Crusoe and
                  Sanne Abeln and
                  Alexandru Iosup and
                  Peter Amstutz and
                  John Chilton and
                  Nebojsa Tijanic and
                  Herv{\'{e}} M{\'{e}}nager and
                  Stian Soiland{-}Reyes and
                  Bogdan Gavrilovic and
                  Carole A. Goble and
                  The Cwl Community},
  title        = {Methods included},
  journal      = {Commun. {ACM}},
  volume       = {65},
  number       = {6},
  pages        = {54--63},
  year         = {2022},
  url          = {https://doi.org/10.1145/3486897},
  doi          = {10.1145/3486897},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cacm/CrusoeAIACTMSGG22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AfganNGBGSOMLSF22,
  author       = {Enis Afgan and
                  Anton Nekrutenko and
                  Bj{\"{o}}rn A. Gr{\"{u}}ning and
                  Daniel J. Blankenberg and
                  Jeremy Goecks and
                  Michael C. Schatz and
                  Alexander E. Ostrovsky and
                  Alexandru Mahmoud and
                  Andrew J. Lonie and
                  Anna Syme and
                  Anne Fouilloux and
                  Anthony Bretaudeau and
                  Anup Kumar and
                  Arthur C. Eschenlauer and
                  Assunta D. Desanto and
                  Aysam Guerler and
                  Beatriz Serrano{-}Solano and
                  B{\'{e}}r{\'{e}}nice Batut and
                  Bradley W. Langhorst and
                  Bridget Carr and
                  Bryan A. Raubenolt and
                  Cameron J. Hyde and
                  Catherine J. Bromhead and
                  Christopher B. Barnett and
                  Coline Royaux and
                  Crist{\'{o}}bal Gallardo and
                  Daniel J. Fornika and
                  Dannon Baker and
                  Dave Bouvier and
                  Dave Clements and
                  David A. de Lima Morais and
                  David Lopez Tabernero and
                  Delphine Larivi{\`{e}}re and
                  Engy Nasr and
                  Federico Zambelli and
                  Florian Heyl and
                  Fotis E. Psomopoulos and
                  Frederik Coppens and
                  Gareth R. Price and
                  Gianmauro Cuccuru and
                  Gildas Le Corguill{\'{e}} and
                  Gregory Von Kuster and
                  Gulsum Gudukbay and
                  Helena Rasche and
                  Hans{-}Rudolf Hotz and
                  Ignacio Eguinoa and
                  Igor V. Makunin and
                  Isuru Ranawaka and
                  James Taylor and
                  Jayadev Joshi and
                  Jennifer Hillman{-}Jackson and
                  John Chilton and
                  Kaivan Kamali and
                  Keith Suderman and
                  Krzysztof Poterlowicz and
                  Yvan Le Bras and
                  Lucille Lopez{-}Delisle and
                  Luke Sargent and
                  Madeline E. Bassetti and
                  Marco Antonio Tangaro and
                  Marius van den Beek and
                  Martin Cech and
                  Matthias Bernt and
                  Matthias Fahrner and
                  Mehmet Tekman and
                  Melanie Christine F{\"{o}}ll and
                  Michael R. Crusoe and
                  Miguel Roncoroni and
                  Natalie Kucher and
                  Nate Coraor and
                  Nicholas Stoler and
                  Nick Rhodes and
                  Nicola Soranzo and
                  Niko Pinter and
                  Nuwan Goonasekera and
                  Pablo A. Moreno and
                  Pavankumar Videm and
                  Petera Melanie and
                  Pietro Mandreoli and
                  Pratik D. Jagtap and
                  Qiang Gu and
                  Ralf J. M. Weber and
                  Ross Lazarus and
                  Ruben H. P. Vorderman and
                  Saskia D. Hiltemann and
                  Sergey Golitsynskiy and
                  Shilpa Garg and
                  Simon A. Bray and
                  Simon L. Gladman and
                  Simone Leo and
                  Subina P. Mehta and
                  Timothy J. Griffin and
                  Vahid Jalili and
                  Yves Vandenbrouck and
                  Victor Wen and
                  Vijay K. Nagampalli and
                  Wendi A. Bacon and
                  Willem L. De Koning and
                  Wolfgang Maier and
                  Peter J. Briggs},
  title        = {The Galaxy platform for accessible, reproducible and collaborative
                  biomedical analyses: 2022 update},
  journal      = {Nucleic Acids Res.},
  volume       = {50},
  number       = {{W1}},
  pages        = {345--351},
  year         = {2022},
  url          = {https://doi.org/10.1093/nar/gkac247},
  doi          = {10.1093/NAR/GKAC247},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AfganNGBGSOMLSF22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GoonasekeraMCA21,
  author       = {Nuwan Goonasekera and
                  Alexandru Mahmoud and
                  John Chilton and
                  Enis Afgan},
  title        = {GalaxyCloudRunner: enhancing scalable computing for Galaxy},
  journal      = {Bioinform.},
  volume       = {37},
  number       = {12},
  pages        = {1763--1765},
  year         = {2021},
  url          = {https://doi.org/10.1093/bioinformatics/btaa860},
  doi          = {10.1093/BIOINFORMATICS/BTAA860},
  timestamp    = {Wed, 16 Mar 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GoonasekeraMCA21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2105-07028,
  author       = {Michael R. Crusoe and
                  Sanne Abeln and
                  Alexandru Iosup and
                  Peter Amstutz and
                  John Chilton and
                  Nebojsa Tijanic and
                  Herv{\'{e}} M{\'{e}}nager and
                  Stian Soiland{-}Reyes and
                  Carole A. Goble},
  title        = {Methods Included: Standardizing Computational Reuse and Portability
                  with the Common Workflow Language},
  journal      = {CoRR},
  volume       = {abs/2105.07028},
  year         = {2021},
  url          = {https://arxiv.org/abs/2105.07028},
  eprinttype    = {arXiv},
  eprint       = {2105.07028},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2105-07028.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AfganBBBBCCCCGG18,
  author       = {Enis Afgan and
                  Dannon Baker and
                  B{\'{e}}r{\'{e}}nice Batut and
                  Marius van den Beek and
                  Dave Bouvier and
                  Martin Cech and
                  John Chilton and
                  Dave Clements and
                  Nate Coraor and
                  Bj{\"{o}}rn A. Gr{\"{u}}ning and
                  Aysam Guerler and
                  Jennifer Hillman{-}Jackson and
                  Saskia D. Hiltemann and
                  Vahid Jalili and
                  Helena Rasche and
                  Nicola Soranzo and
                  Jeremy Goecks and
                  James Taylor and
                  Anton Nekrutenko and
                  Daniel J. Blankenberg},
  title        = {The Galaxy platform for accessible, reproducible and collaborative
                  biomedical analyses: 2018 update},
  journal      = {Nucleic Acids Res.},
  volume       = {46},
  number       = {Webserver-Issue},
  pages        = {W537--W544},
  year         = {2018},
  url          = {https://doi.org/10.1093/nar/gky379},
  doi          = {10.1093/NAR/GKY379},
  timestamp    = {Thu, 25 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AfganBBBBCCCCGG18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/GruningRREHCCBT17,
  author       = {Bj{\"{o}}rn A. Gr{\"{u}}ning and
                  Eric Rasche and
                  Boris Rebolledo{-}Jaramillo and
                  Carl Eberhard and
                  Torsten Houwaart and
                  John Chilton and
                  Nate Coraor and
                  Rolf Backofen and
                  James Taylor and
                  Anton Nekrutenko},
  title        = {Jupyter and Galaxy: Easing entry barriers into complex data analyses
                  for biomedical researchers},
  journal      = {PLoS Comput. Biol.},
  volume       = {13},
  number       = {5},
  year         = {2017},
  url          = {https://doi.org/10.1371/journal.pcbi.1005425},
  doi          = {10.1371/JOURNAL.PCBI.1005425},
  timestamp    = {Thu, 25 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/GruningRREHCCBT17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AfganBBBBCCCCEG16,
  author       = {Enis Afgan and
                  Dannon Baker and
                  Marius van den Beek and
                  Daniel J. Blankenberg and
                  Dave Bouvier and
                  Martin Cech and
                  John Chilton and
                  Dave Clements and
                  Nate Coraor and
                  Carl Eberhard and
                  Bj{\"{o}}rn A. Gr{\"{u}}ning and
                  Aysam Guerler and
                  Jennifer Hillman{-}Jackson and
                  Gregory Von Kuster and
                  Eric Rasche and
                  Nicola Soranzo and
                  Nitesh Turaga and
                  James Taylor and
                  Anton Nekrutenko and
                  Jeremy Goecks},
  title        = {The Galaxy platform for accessible, reproducible and collaborative
                  biomedical analyses: 2016 update},
  journal      = {Nucleic Acids Res.},
  volume       = {44},
  number       = {Webserver-Issue},
  pages        = {W3--W10},
  year         = {2016},
  url          = {https://doi.org/10.1093/nar/gkw343},
  doi          = {10.1093/NAR/GKW343},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AfganBBBBCCCCEG16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/TuragaFBCTNT16,
  author       = {Nitesh Turaga and
                  Mallory Ann Freeberg and
                  Dannon Baker and
                  John Chilton and
                  The Galaxy Team and
                  Anton Nekrutenko and
                  James Taylor},
  title        = {A guide and best practices for R/Bioconductor tool integration in
                  Galaxy},
  journal      = {F1000Research},
  volume       = {5},
  pages        = {2757},
  year         = {2016},
  url          = {https://doi.org/10.12688/f1000research.9821.1},
  doi          = {10.12688/F1000RESEARCH.9821.1},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/TuragaFBCTNT16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/AfganCCBTT15,
  author       = {Enis Afgan and
                  Nathan Coraor and
                  John Chilton and
                  Dannon Baker and
                  James Taylor and
                  The Galaxy Team},
  title        = {Enabling cloud bursting for life sciences within Galaxy},
  journal      = {Concurr. Comput. Pract. Exp.},
  volume       = {27},
  number       = {16},
  pages        = {4330--4343},
  year         = {2015},
  url          = {https://doi.org/10.1002/cpe.3536},
  doi          = {10.1002/CPE.3536},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/concurrency/AfganCCBTT15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MollerABBBCCGHHKKKPPQSSSSSSSTTGKC14,
  author       = {Steffen M{\"{o}}ller and
                  Enis Afgan and
                  Michael Banck and
                  Raoul Jean Pierre Bonnal and
                  Timothy Booth and
                  John Chilton and
                  Peter J. A. Cock and
                  Markus Gumbel and
                  Nomi L. Harris and
                  Richard C. G. Holland and
                  Mat{\'{u}}s Kalas and
                  L{\'{a}}szl{\'{o}} Kaj{\'{a}}n and
                  Eri Kibukawa and
                  David R. Powell and
                  Pjotr Prins and
                  Jacqueline Quinn and
                  Olivier Sallou and
                  Francesco Strozzi and
                  Torsten Seemann and
                  Clare Sloggett and
                  Stian Soiland{-}Reyes and
                  William Spooner and
                  Sascha Steinbiss and
                  Andreas Tille and
                  Anthony J. Travis and
                  Roman Guimera and
                  Toshiaki Katayama and
                  Brad A. Chapman},
  title        = {Community-driven development for computational biology at Sprints,
                  Hackathons and Codefests},
  journal      = {{BMC} Bioinform.},
  volume       = {15},
  number       = {{S-14}},
  pages        = {S7},
  year         = {2014},
  url          = {https://doi.org/10.1186/1471-2105-15-S14-S7},
  doi          = {10.1186/1471-2105-15-S14-S7},
  timestamp    = {Wed, 07 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/MollerABBBCCGHHKKKPPQSSSSSSSTTGKC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/AfganBCCT14,
  author       = {Enis Afgan and
                  Dannon Baker and
                  John Chilton and
                  Nathan Coraor and
                  James Taylor},
  title        = {Galaxy cluster to cloud - genomics at scale},
  booktitle    = {Proceedings of the 9th Gateway Computing Environments Workshop, {GCE}
                  '14, New Orleans, Louisiana, USA, November 16-21, 2014},
  pages        = {47--50},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/GCE.2014.13},
  doi          = {10.1109/GCE.2014.13},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/sc/AfganBCCT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pervasive/ChaudhriSLCBMC12,
  author       = {Rohit Chaudhri and
                  Rita Sodt and
                  Kristian Lieberg and
                  John Chilton and
                  Gaetano Borriello and
                  Yuta Masuda and
                  Joe Cook},
  title        = {Sensors and Smartphones: Tracking Water Collection in Rural Ethiopia},
  journal      = {{IEEE} Pervasive Comput.},
  volume       = {11},
  number       = {3},
  pages        = {15--24},
  year         = {2012},
  url          = {https://doi.org/10.1109/MPRV.2012.21},
  doi          = {10.1109/MPRV.2012.21},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/pervasive/ChaudhriSLCBMC12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dac/KuehlmannCCCGGLS10,
  author       = {Andreas Kuehlmann and
                  Raul Camposano and
                  James Colgan and
                  John Chilton and
                  Samuel George and
                  Rean Griffith and
                  Paul Leventis and
                  Deepak Singh},
  editor       = {Sachin S. Sapatnekar},
  title        = {Does {IC} design have a future in the clouds?},
  booktitle    = {Proceedings of the 47th Design Automation Conference, {DAC} 2010,
                  Anaheim, California, USA, July 13-18, 2010},
  pages        = {412--414},
  publisher    = {{ACM}},
  year         = {2010},
  url          = {https://doi.org/10.1145/1837274.1837377},
  doi          = {10.1145/1837274.1837377},
  timestamp    = {Tue, 06 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/dac/KuehlmannCCCGGLS10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaaiss/ChiltonG07,
  author       = {John Chilton and
                  Maria L. Gini},
  title        = {Using the AIBOs in a {CS1} Course},
  booktitle    = {Robots and Robot Venues: Resources for {AI} Education, Papers from
                  the 2007 {AAAI} Spring Symposium, Technical Report SS-07-09, Stanford,
                  California, USA, March 26-28, 2007},
  pages        = {24--28},
  publisher    = {{AAAI}},
  year         = {2007},
  url          = {http://www.aaai.org/Library/Symposia/Spring/2007/ss07-09-006.php},
  timestamp    = {Fri, 17 Feb 2012 14:16:27 +0100},
  biburl       = {https://dblp.org/rec/conf/aaaiss/ChiltonG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isqed/Chilton04,
  author       = {John Chilton},
  title        = {Simplify: Enable Quality, Enable Innovation},
  booktitle    = {5th International Symposium on Quality of Electronic Design {(ISQED}
                  2004), 22-24 March 2004, San Jose, CA, {USA}},
  pages        = {17},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/ISQED.2004.1283642},
  doi          = {10.1109/ISQED.2004.1283642},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/isqed/Chilton04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isqed/Chilton02,
  author       = {John Chilton},
  title        = {{IP} {REUSE} {QUALITY:} "Intellectual Property" or "Intense
                  Pain"?},
  booktitle    = {3rd International Symposium on Quality of Electronic Design, {ISQED}
                  2002, San Jose, CA, USA, March 18-21, 2002},
  pages        = {21--22},
  publisher    = {{IEEE} Computer Society},
  year         = {2002},
  url          = {https://doi.ieeecomputersociety.org/10.1109/ISQED.2002.10024},
  doi          = {10.1109/ISQED.2002.10024},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/isqed/Chilton02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isss/SavageCC00,
  author       = {Warren Savage and
                  John Chilton and
                  Raul Camposano},
  editor       = {Fadi J. Kurdahi and
                  Rom{\'{a}}n Hermida},
  title        = {{IP} Reuse in the System on a Chip Era},
  booktitle    = {Proceedings of the 13th International Symposium on System Synthesis,
                  ISSS'00, Madrid, Spain, September 20-22, 2000},
  pages        = {2--8},
  publisher    = {{ACM} / {IEEE} Computer Society},
  year         = {2000},
  url          = {https://doi.org/10.1109/ISSS.2000.874022},
  doi          = {10.1109/ISSS.2000.874022},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/isss/SavageCC00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vlsid/CamposanoSC00,
  author       = {Raul Camposano and
                  Warren Savage and
                  John Chilton},
  title        = {{IP} Reuse in System on a Chip Design},
  booktitle    = {13th International Conference on {VLSI} Design {(VLSI} Design 2000),
                  4-7 January 2000, Calcutta, India},
  pages        = {20},
  publisher    = {{IEEE} Computer Society},
  year         = {2000},
  url          = {https://doi.ieeecomputersociety.org/10.1109/VLSID.2000.10016},
  doi          = {10.1109/VLSID.2000.10016},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/vlsid/CamposanoSC00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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