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ORCIDBibTeX records: Alexander García Castro
@article{DBLP:journals/ploscb/GarciaACBJPBK20,
author = {Leyla J. Garc{\'{\i}}a and
Erick Antezana and
Alexander Garc{\'{\i}}a Castro and
Evan Bolton and
Rafael C. Jim{\'{e}}nez and
Pjotr Prins and
Juan M. Banda and
Toshiaki Katayama},
title = {Ten simple rules to run a successful BioHackathon},
journal = {PLoS Comput. Biol.},
volume = {16},
number = {5},
year = {2020},
url = {https://doi.org/10.1371/journal.pcbi.1007808},
doi = {10.1371/JOURNAL.PCBI.1007808},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/GarciaACBJPBK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/VosKMKKKMTYYWAAAABBBBBCCD20,
author = {Rutger A. Vos and
Toshiaki Katayama and
Hiroyuki Mishima and
Shin Kawano and
Shuichi Kawashima and
Jin{-}Dong Kim and
Yuki Moriya and
Toshiaki Tokimatsu and
Atsuko Yamaguchi and
Yasunori Yamamoto and
Hongyan Wu and
Peter Amstutz and
Erick Antezana and
Nobuyuki P. Aoki and
Kazuharu Arakawa and
Jerven T. Bolleman and
Evan E. Bolton and
Raoul Jean Pierre Bonnal and
Hidemasa Bono and
Kees Burger and
Hirokazu Chiba and
Kevin Bretonnel Cohen and
Eric W. Deutsch and
Jesualdo Tom{\'{a}}s Fern{\'{a}}ndez{-}Breis and
Gang Fu and
Takatomo Fujisawa and
Atsushi Fukushima and
Alexander Garc{\'{\i}}a Castro and
Naohisa Goto and
Tudor Groza and
Colin Hercus and
Robert Hoehndorf and
Kotone Itaya and
Nick S. Juty and
Takeshi Kawashima and
Jee{-}Hyub Kim and
Akira R. Kinjo and
Masaaki Kotera and
Kouji Kozaki and
Sadahiro Kumagai and
Tatsuya Kushida and
Thomas L{\"{u}}tteke and
Masaaki Matsubara and
Joe Miyamoto and
Attayeb Mohsen and
Hiroshi Mori and
Yuki Naito and
Takeru Nakazato and
Jeremy NguyenXuan and
Kozo Nishida and
Naoki Nishida and
Hiroyo Nishide and
Soichi Ogishima and
Tazro Ohta and
Shujiro Okuda and
Benedict Paten and
Jean{-}Luc Perret and
Philip Prathipati and
Pjotr Prins and
N{\'{u}}ria Queralt{-}Rosinach and
Daisuke Shinmachi and
Shinya Suzuki and
Tsuyosi Tabata and
Terue Takatsuki and
Kieron R. Taylor and
Mark Thompson and
Ikuo Uchiyama and
Bruno Vieira and
Chih{-}Hsuan Wei and
Mark D. Wilkinson and
Issaku Yamada and
Ryota Yamanaka and
Kazutoshi Yoshitake and
Akiyasu C. Yoshizawa and
Michel Dumontier and
Kenjiro Kosaki and
Toshihisa Takagi},
title = {BioHackathon 2015: Semantics of data for life sciences and reproducible
research},
journal = {F1000Research},
volume = {9},
pages = {136},
year = {2020},
url = {https://doi.org/10.12688/f1000research.18236.1},
doi = {10.12688/F1000RESEARCH.18236.1},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/f1000research/VosKMKKKMTYYWAAAABBBBBCCD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/GiraldoCLC17,
author = {Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro and
Federico L{\'{o}}pez and
{\'{O}}scar Corcho},
title = {Using semantics for representing experimental protocols},
journal = {J. Biomed. Semant.},
volume = {8},
number = {1},
pages = {52:1--52:15},
year = {2017},
url = {https://doi.org/10.1186/s13326-017-0160-y},
doi = {10.1186/S13326-017-0160-Y},
timestamp = {Wed, 08 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biomedsem/GiraldoCLC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/CastroAGGPV17,
author = {Alexander Garc{\'{\i}}a Castro and
Erick Antezana and
Jael Garc{\'{\i}}a and
Olga L. Giraldo and
Pjotr Prins and
Rutger A. Vos},
editor = {Adrian Paschke and
Albert Burger and
Andrea Splendiani and
M. Scott Marshall and
Paolo Romano and
Valentina Presutti},
title = {Sh{\={o}}-coin: {A} Knowledge-Based Economy for Life Sciences},
booktitle = {Proceedings of the 10th International Conference on Semantic Web Applications
and Tools for Health Care and Life Sciences {(SWAT4LS} 2017), Rome,
Italy, December 4-7, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2042},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2042/paper41.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/CastroAGGPV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/CastroGCDC17,
author = {Leyla J. Garc{\'{\i}}a and
Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro and
Michel Dumontier and
Bioschemas Community},
editor = {Adrian Paschke and
Albert Burger and
Andrea Splendiani and
M. Scott Marshall and
Paolo Romano and
Valentina Presutti},
title = {Bioschemas: schema.org for the Life Sciences},
booktitle = {Proceedings of the 10th International Conference on Semantic Web Applications
and Tools for Health Care and Life Sciences {(SWAT4LS} 2017), Rome,
Italy, December 4-7, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2042},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2042/paper33.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/CastroGCDC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijait/Garcia-SilvaGCC15,
author = {Andr{\'{e}}s Garc{\'{\i}}a{-}Silva and
Leyla Jael Garc{\'{\i}}a Castro and
Alexander Garc{\'{\i}}a Castro and
{\'{O}}scar Corcho},
title = {Building Domain Ontologies Out of Folksonomies and Linked Data},
journal = {Int. J. Artif. Intell. Tools},
volume = {24},
number = {2},
pages = {1540014:1--1540014:22},
year = {2015},
url = {https://doi.org/10.1142/S021821301540014X},
doi = {10.1142/S021821301540014X},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijait/Garcia-SilvaGCC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/Garcia-CastroLC15,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Rafael Berlanga Llavori and
Alexander Garc{\'{\i}}a Castro},
title = {In the pursuit of a semantic similarity metric based on {UMLS} annotations
for articles in PubMed Central Open Access},
journal = {J. Biomed. Informatics},
volume = {57},
pages = {204--218},
year = {2015},
url = {https://doi.org/10.1016/j.jbi.2015.07.015},
doi = {10.1016/J.JBI.2015.07.015},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/Garcia-CastroLC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GiraldoGC15,
author = {Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro and
{\'{O}}scar Corcho},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Using Semantics and {NLP} in the {SMART} Protocols Repository},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster6.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GiraldoGC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iknow/CastroBW15,
author = {Alexander Garc{\'{\i}}a Castro and
Isabel Barth and
Erich Weichselgartner},
editor = {Stefanie N. Lindstaedt and
Tobias Ley and
Harald Sack},
title = {KOBPSY, a knowledge base in psychology and behavioral sciences},
booktitle = {Proceedings of the 15th International Conference on Knowledge Technologies
and Data-driven Business, {I-KNOW} '15, Graz, Austria, October 21-23,
2015},
pages = {29:1--29:4},
publisher = {{ACM}},
year = {2015},
url = {https://doi.org/10.1145/2809563.2809604},
doi = {10.1145/2809563.2809604},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iknow/CastroBW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/GiraldoCCF15,
author = {Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro and
{\'{O}}scar Corcho and
Jose Figueredo},
editor = {James Malone and
Robert Stevens and
Kerstin Forsberg and
Andrea Splendiani},
title = {Using Semantics and {NLP} in Experimental Protocols},
booktitle = {Proceedings of the 8th Semantic Web Applications and Tools for Life
Sciences International Conference, Cambridge UK, December 7-10, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1546},
pages = {132--141},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1546/paper\_15.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:03 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/GiraldoCCF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/semweb/2014it,
editor = {Axel Polleres and
Alexander Garc{\'{\i}}a Castro and
V. Richard Benjamins},
title = {Proceedings of the Industry Track at the International Semantic Web
Conference 2014 Co-located with the 13th International Semantic Web
Conference {(ISWC} 2014), Riva del Garda, Italy, October 19-23, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1383},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1383},
urn = {urn:nbn:de:0074-1383-7},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/2014it.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dagstuhl-reports/CastroHSW15,
author = {Alexander Garc{\'{\i}}a Castro and
Janna Hastings and
Robert Stevens and
Erich Weichselgartner},
title = {Digital Scholarship and Open Science in Psychology and the Behavioral
Sciences (Dagstuhl Perpectives Workshop 15302)},
journal = {Dagstuhl Reports},
volume = {5},
number = {7},
pages = {42--68},
year = {2015},
url = {https://doi.org/10.4230/DagRep.5.7.42},
doi = {10.4230/DAGREP.5.7.42},
timestamp = {Mon, 21 Jan 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dagstuhl-reports/CastroHSW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/GiraldoCC14,
author = {Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro and
{\'{O}}scar Corcho},
editor = {Jun Zhao and
Marieke van Erp and
Carsten Ke{\ss}ler and
Tomi Kauppinen and
Jacco van Ossenbruggen and
Willem Robert van Hage},
title = {{SMART} Protocols: SeMAntic RepresenTation for Experimental Protocols},
booktitle = {Proceedings of the 4th Workshop on Linked Science 2014 - Making Sense
Out of Data {(LISC2014)} co-located with the 13th International Semantic
Web Conference {(ISWC} 2014), Riva del Garda, Italy, October 19, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1282},
pages = {36--47},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1282/lisc2014\_submission\_2.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:09 +0100},
biburl = {https://dblp.org/rec/conf/semweb/GiraldoCC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wims/Garcia-SilvaGCC14,
author = {Andr{\'{e}}s Garc{\'{\i}}a{-}Silva and
Leyla Jael Garc{\'{\i}}a Castro and
Alexander Garc{\'{\i}}a Castro and
{\'{O}}scar Corcho},
editor = {Rajendra Akerkar and
Nick Bassiliades and
John Davies and
Vadim Ermolayev},
title = {Social Tags and Linked Data for Ontology Development: {A} Case Study
in the Financial Domain},
booktitle = {4th International Conference on Web Intelligence, Mining and Semantics
{(WIMS} 14), {WIMS} '14, Thessaloniki, Greece, June 2-4, 2014},
pages = {32:1--32:10},
publisher = {{ACM}},
year = {2014},
url = {https://doi.org/10.1145/2611040.2611075},
doi = {10.1145/2611040.2611075},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wims/Garcia-SilvaGCC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/esws/2014sepublica,
editor = {Alexander Garc{\'{\i}}a Castro and
Christoph Lange and
Phillip W. Lord and
Robert Stevens},
title = {Proceedings of the 4th Workshop on Semantic Publishing co-located
with the 11th Extended Semantic Web Conference {(ESWC} 2014), Anissaras,
Greece, May 25th, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1155},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1155},
urn = {urn:nbn:de:0074-1155-8},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/esws/2014sepublica.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/CorpasJCCCGGKLMPRSSSSTVYH14,
author = {Manuel Corpas and
Rafael C. Jim{\'{e}}nez and
Seth Carbon and
Alexander Garc{\'{\i}}a Castro and
Leyla Jael Castro and
Tatyana Goldberg and
John G{\'{o}}mez and
Alex Kalderimis and
Suzanna E. Lewis and
Ian Mulvany and
Aleksandra Pawlik and
Francis Rowland and
Gustavo A. Salazar and
Fabian Schreiber and
Ian Sillitoe and
William Spooner and
Anil S. Thanki and
Jose M. Villaveces and
Guy Yachdav and
Henning Hermjakob},
title = {BioJS: an open source standard for biological visualisation - its
status in 2014},
journal = {F1000Research},
volume = {3},
pages = {55},
year = {2014},
url = {https://doi.org/10.12688/f1000research.3-55.v1},
doi = {10.12688/F1000RESEARCH.3-55.V1},
timestamp = {Fri, 08 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/f1000research/CorpasJCCCGGKLMPRSSSSTVYH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GomezGSVGGMLAdDOVHZPCJ13,
author = {John G{\'{o}}mez and
Leyla J. Garc{\'{\i}}a and
Gustavo A. Salazar and
Jose M. Villaveces and
Swanand P. Gore and
Alexander Garc{\'{\i}}a Castro and
Maria Jesus Martin and
Guillaume Launay and
Rafael Alc{\'{a}}ntara and
Noemi del{-}Toro and
Marine Dumousseau and
Sandra E. Orchard and
Sameer Velankar and
Henning Hermjakob and
Chenggong Zong and
Peipei Ping and
Manuel Corpas and
Rafael C. Jim{\'{e}}nez},
title = {BioJS: an open source JavaScript framework for biological data visualization},
journal = {Bioinform.},
volume = {29},
number = {8},
pages = {1103--1104},
year = {2013},
url = {https://doi.org/10.1093/bioinformatics/btt100},
doi = {10.1093/BIOINFORMATICS/BTT100},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GomezGSVGGMLAdDOVHZPCJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/Garcia-CastroMC13,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Casey McLaughlin and
Alexander Garc{\'{\i}}a Castro},
title = {Biotea: RDFizing PubMed Central in support for the paper as an interface
to the Web of Data},
journal = {J. Biomed. Semant.},
volume = {4},
number = {{S-1}},
pages = {S5},
year = {2013},
url = {http://www.jbiomedsem.com/content/4/S1/S5},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biomedsem/Garcia-CastroMC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esws/CastroLRG13,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Rafael Berlanga Llavori and
Dietrich Rebholz{-}Schuhmann and
Alexander Garc{\'{\i}}a Castro},
editor = {Alexander Garc{\'{\i}}a Castro and
Christoph Lange and
Phillip W. Lord and
Robert Stevens},
title = {Connections across Scientific Publications based on Semantic Annotations},
booktitle = {Proceedings of the 3rd Workshop on Semantic Publishing, Montpellier,
France, May 26th, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {994},
pages = {51--62},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-994/paper-05.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:13 +0100},
biburl = {https://dblp.org/rec/conf/esws/CastroLRG13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/micai/BermeoGC13,
author = {Nestor Velasco Bermeo and
Miguel Gonz{\'{a}}lez{-}Mendoza and
Alexander Garc{\'{\i}}a Castro},
editor = {F{\'{e}}lix Castro{-}Espinoza and
Alexander F. Gelbukh and
Miguel Gonz{\'{a}}lez{-}Mendoza},
title = {Semantic Representation of {CAD} Models Based on the {IGES} Standard},
booktitle = {Advances in Artificial Intelligence and Its Applications - 12th Mexican
International Conference on Artificial Intelligence, {MICAI} 2013,
Mexico City, Mexico, November 24-30, 2013, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {8265},
pages = {157--168},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-45114-0\_13},
doi = {10.1007/978-3-642-45114-0\_13},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/micai/BermeoGC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/esws/2013sepublica,
editor = {Alexander Garc{\'{\i}}a Castro and
Christoph Lange and
Phillip W. Lord and
Robert Stevens},
title = {Proceedings of the 3rd Workshop on Semantic Publishing, Montpellier,
France, May 26th, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {994},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-994},
urn = {urn:nbn:de:0074-994-6},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/esws/2013sepublica.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esws/CastroGC12,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro},
editor = {Alexander Garc{\'{\i}}a Castro and
Christoph Lange and
Frank van Harmelen and
Benjamin M. Good},
title = {Using annotations to model discourse: an extension to the Annotation
Ontology},
booktitle = {Proceedings of the 2nd Workshop on Semantic Publishing, co-located
with the 9th Extended Semantic Web Conference, SePublica@ESWC 2012,
Hersonissos, Crete, Greece, May 28, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {903},
pages = {13--22},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-903/paper-02.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:13 +0100},
biburl = {https://dblp.org/rec/conf/esws/CastroGC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/micai/BermeoGCD12,
author = {Nestor Velasco Bermeo and
Miguel Gonz{\'{a}}lez{-}Mendoza and
Alexander Garc{\'{\i}}a Castro and
Irais Heras Due{\~{n}}as},
editor = {Ildar Z. Batyrshin and
Miguel Gonz{\'{a}}lez{-}Mendoza},
title = {Towards the Creation of Semantic Models Based on Computer-Aided Designs},
booktitle = {Advances in Artificial Intelligence - 11th Mexican International Conference
on Artificial Intelligence, {MICAI} 2012, San Luis Potos{\'{\i}},
Mexico, October 27 - November 4, 2012. Revised Selected Papers, Part
{I}},
series = {Lecture Notes in Computer Science},
volume = {7629},
pages = {298--310},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-37807-2\_26},
doi = {10.1007/978-3-642-37807-2\_26},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/micai/BermeoGCD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/CastroGG12,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Alexander Garc{\'{\i}}a Castro and
John G{\'{o}}mez},
editor = {Adrian Paschke and
Albert Burger and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {Conceptual Exploration of Documents and Digital Libraries in the Biomedical
Domain},
booktitle = {Proceedings of the 5th International Workshop on Semantic Web Applications
and Tools for Life Sciences, Paris, France, November 28-30, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {952},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-952/paper\_40.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/CastroGG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/esws/2012sepublica,
editor = {Alexander Garc{\'{\i}}a Castro and
Christoph Lange and
Frank van Harmelen and
Benjamin M. Good},
title = {Proceedings of the 2nd Workshop on Semantic Publishing, co-located
with the 9th Extended Semantic Web Conference, SePublica@ESWC 2012,
Hersonissos, Crete, Greece, May 28, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {903},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-903},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/esws/2012sepublica.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VillavecesJGSGMMCH11,
author = {Jose M. Villaveces and
Rafael C. Jim{\'{e}}nez and
Leyla J. Garc{\'{\i}}a and
Gustavo A. Salazar and
Bernat Gel and
Nicola J. Mulder and
Maria Jesus Martin and
Alexander Garc{\'{\i}}a Castro and
Henning Hermjakob},
title = {Dasty3, a {WEB} framework for {DAS}},
journal = {Bioinform.},
volume = {27},
number = {18},
pages = {2616--2617},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr433},
doi = {10.1093/BIOINFORMATICS/BTR433},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/VillavecesJGSGMMCH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SalazarJCHMB11,
author = {Gustavo A. Salazar and
Rafael C. Jim{\'{e}}nez and
Alexander Garc{\'{\i}}a Castro and
Henning Hermjakob and
Nicola J. Mulder and
Edwin H. Blake},
title = {{DAS} Writeback: {A} Collaborative Annotation System},
journal = {{BMC} Bioinform.},
volume = {12},
pages = {143},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-143},
doi = {10.1186/1471-2105-12-143},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SalazarJCHMB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CastroGG11,
author = {Alexander Garc{\'{\i}}a Castro and
Olga L. Giraldo and
Leyla J. Garc{\'{\i}}a},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Annotating Experimental Records Using Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper12.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CastroGG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KutzMHCS11,
author = {Oliver Kutz and
Till Mossakowski and
Janna Hastings and
Alexander Garc{\'{\i}}a Castro and
Aleksandra Sojic},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Hyperontology for the Biomedical Ontologist: {A} Sketch and Some Examples},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper76.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KutzMHCS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/GarciaC11,
author = {Alexander Garc{\'{\i}}a Castro and
Leyla Jael Garc{\'{\i}}a Castro},
editor = {Adrian Paschke and
Albert Burger and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {A translational model for representing research articles},
booktitle = {Proceedings of the 4th International Workshop on Semantic Web Applications
and Tools for the Life Sciences, {SWAT4LS} 2011, London, United Kingdom,
December 07-09, 2011},
pages = {20--21},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2166896.2166904},
doi = {10.1145/2166896.2166904},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/GarciaC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/CastroG11,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Alexander Garc{\'{\i}}a Castro},
editor = {Adrian Paschke and
Albert Burger and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {Tagsty: augmented knowledge from community-based annotations on protein
sequences},
booktitle = {Proceedings of the 4th International Workshop on Semantic Web Applications
and Tools for the Life Sciences, {SWAT4LS} 2011, London, United Kingdom,
December 07-09, 2011},
pages = {22--23},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2166896.2166905},
doi = {10.1145/2166896.2166905},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/CastroG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/esws/2011sepublica,
editor = {Alexander Garc{\'{\i}}a Castro and
Christoph Lange and
Evan Sandhaus and
Anita de Waard},
title = {Proceedings of the 1st Workshop on Semantic Publishing 2011, Hersonissos,
Crete, Greece, May 30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {721},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-721},
urn = {urn:nbn:de:0074-721-4},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/esws/2011sepublica.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ws/CastroLGGMB10,
author = {Alexander Garc{\'{\i}}a Castro and
Alberto Labarga and
Leyla J. Garc{\'{\i}}a and
Olga L. Giraldo and
C{\'{e}}sar Monta{\~{n}}a and
John A. Bateman},
title = {Semantic Web and Social Web heading towards Living Documents in the
Life Sciences},
journal = {J. Web Semant.},
volume = {8},
number = {2-3},
pages = {155--162},
year = {2010},
url = {https://doi.org/10.1016/j.websem.2010.03.006},
doi = {10.1016/J.WEBSEM.2010.03.006},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ws/CastroLGGMB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ekaw/Garcia-CastroHC10,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Martin Hepp and
Alexander Garc{\'{\i}}a Castro},
editor = {Philipp Cimiano and
Helena Sofia Pinto},
title = {TagSorting: {A} Tagging Environment for Collaboratively Building Ontologies},
booktitle = {Knowledge Engineering and Management by the Masses - 17th International
Conference, {EKAW} 2010, Lisbon, Portugal, October 11-15, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6317},
pages = {462--472},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-16438-5\_36},
doi = {10.1007/978-3-642-16438-5\_36},
timestamp = {Sun, 02 Oct 2022 15:59:57 +0200},
biburl = {https://dblp.org/rec/conf/ekaw/Garcia-CastroHC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/Garcia-CastroGC10,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro},
editor = {Axel Polleres and
Huajun Chen},
title = {Using the Annotation Ontology in Semantic Digital Libraries},
booktitle = {Proceedings of the {ISWC} 2010 Posters {\&} Demonstrations Track:
Collected Abstracts, Shanghai, China, November 9, 2010},
series = {{CEUR} Workshop Proceedings},
volume = {658},
publisher = {CEUR-WS.org},
year = {2010},
url = {https://ceur-ws.org/Vol-658/paper505.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:09 +0100},
biburl = {https://dblp.org/rec/conf/semweb/Garcia-CastroGC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/anis/CastroOGLSCG10,
author = {Alexander Garc{\'{\i}}a Castro and
Kieran O'Neill and
Leyla Jael Garc{\'{\i}}a Castro and
Phillip W. Lord and
Robert Stevens and
{\'{O}}scar Corcho and
Frank Gibson},
editor = {Huajun Chen and
Yimin Wang and
Kei{-}Hoi Cheung},
title = {Developing Ontologies within Decentralised Settings},
booktitle = {Semantic e-Science},
series = {Annals of Information Systems},
volume = {11},
pages = {99--139},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-1-4419-5908-9\_4},
doi = {10.1007/978-1-4419-5908-9\_4},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/series/anis/CastroOGLSCG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dexa/CastroGLGMOB09,
author = {Alexander Garc{\'{\i}}a Castro and
Leyla Jael Garc{\'{\i}}a Castro and
Alberto Labarga and
Olga L. Giraldo and
C{\'{e}}sar Monta{\~{n}}a and
Kieran O'Neill and
John A. Bateman},
editor = {Sourav S. Bhowmick and
Josef K{\"{u}}ng and
Roland R. Wagner},
title = {Annotating Atomic Components of Papers in Digital Libraries: The Semantic
and Social Web Heading towards a Living Document Supporting eSciences},
booktitle = {Database and Expert Systems Applications, 20th International Conference,
{DEXA} 2009, Linz, Austria, August 31 - September 4, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5690},
pages = {287--301},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-03573-9\_24},
doi = {10.1007/978-3-642-03573-9\_24},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dexa/CastroGLGMOB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dexa/Garcia-CastroHC09,
author = {Leyla Jael Garc{\'{\i}}a Castro and
Martin Hepp and
Alexander Garc{\'{\i}}a Castro},
editor = {Sourav S. Bhowmick and
Josef K{\"{u}}ng and
Roland R. Wagner},
title = {Tags4Tags: Using Tagging to Consolidate Tags},
booktitle = {Database and Expert Systems Applications, 20th International Conference,
{DEXA} 2009, Linz, Austria, August 31 - September 4, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5690},
pages = {619--628},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-03573-9\_52},
doi = {10.1007/978-3-642-03573-9\_52},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dexa/Garcia-CastroHC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JimenezQGLOMSH08,
author = {Rafael C. Jim{\'{e}}nez and
Antony F. Quinn and
Alexander Garc{\'{\i}}a Castro and
Alberto Labarga and
Kieran O'Neill and
Fernando Martinez and
Gustavo A. Salazar and
Henning Hermjakob},
title = {Dasty2, an Ajax protein {DAS} client},
journal = {Bioinform.},
volume = {24},
number = {18},
pages = {2119--2121},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn387},
doi = {10.1093/BIOINFORMATICS/BTN387},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JimenezQGLOMSH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ONeillGSJJH08,
author = {Kieran O'Neill and
Alexander Garc{\'{\i}}a Castro and
Anita Schwegmann and
Rafael C. Jim{\'{e}}nez and
Dan Jacobson and
Henning Hermjakob},
title = {OntoDas - a tool for facilitating the construction of complex queries
to the Gene Ontology},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-437},
doi = {10.1186/1471-2105-9-437},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ONeillGSJJH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/GarciaNBG08,
author = {Alexander Garc{\'{\i}}a Castro and
Angela Norena and
Andres Betancourt and
Leyla J. Garc{\'{\i}}a},
editor = {Christian Bizer and
Anupam Joshi},
title = {{CMAPS} Supporting the Development of {OWL} Ontologies},
booktitle = {Proceedings of the Poster and Demonstration Session at the 7th International
Semantic Web Conference (ISWC2008), Karlsruhe, Germany, October 28,
2008},
series = {{CEUR} Workshop Proceedings},
volume = {401},
publisher = {CEUR-WS.org},
year = {2008},
url = {https://ceur-ws.org/Vol-401/iswc2008pd\_submission\_45.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:06 +0100},
biburl = {https://dblp.org/rec/conf/semweb/GarciaNBG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/KehagiasCTG08,
author = {Dionysios D. Kehagias and
Alexander Garc{\'{\i}}a Castro and
Dimitrios Tzovaras and
Dimitrios Giakoumis},
editor = {Christian Bizer and
Anupam Joshi},
title = {A Semantic Web Service Alignment Tool},
booktitle = {Proceedings of the Poster and Demonstration Session at the 7th International
Semantic Web Conference (ISWC2008), Karlsruhe, Germany, October 28,
2008},
series = {{CEUR} Workshop Proceedings},
volume = {401},
publisher = {CEUR-WS.org},
year = {2008},
url = {https://ceur-ws.org/Vol-401/iswc2008pd\_submission\_58.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/KehagiasCTG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CastroRSTNRS06,
author = {Alexander Garc{\'{\i}}a Castro and
Philippe Rocca{-}Serra and
Robert Stevens and
Chris F. Taylor and
Karim Nashar and
Mark A. Ragan and
Susanna{-}Assunta Sansone},
title = {The use of concept maps during knowledge elicitation in ontology development
processes - the nutrigenomics use case},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {267},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-267},
doi = {10.1186/1471-2105-7-267},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CastroRSTNRS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CastroTGR05,
author = {Alexander Garc{\'{\i}}a Castro and
Samuel Thoraval and
Leyla J. Garc{\'{\i}}a and
Mark A. Ragan},
title = {Workflows in bioinformatics: meta-analysis and prototype implementation
of a workflow generator},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {87},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-87},
doi = {10.1186/1471-2105-6-87},
timestamp = {Mon, 04 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CastroTGR05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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