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ORCIDBibTeX records: Catherine Brooksbank
@article{DBLP:journals/nar/ThakurBBFHHKKLLMMOPVVWZM23,
author = {Matthew Thakur and
Alex Bateman and
Cath Brooksbank and
Mallory Ann Freeberg and
Melissa Harrison and
Matthew Hartley and
Thomas M. Keane and
Gerard J. Kleywegt and
Andrew Leach and
Maria Levchenko and
Sarah L. Morgan and
Ellen M. McDonagh and
Sandra E. Orchard and
Irene Papatheodorou and
Sameer Velankar and
Juan Antonio Vizca{\'{\i}}no and
Rick Witham and
Barbara Zdrazil and
Johanna R. McEntyre},
title = {EMBL's European Bioinformatics Institute {(EMBL-EBI)} in 2022},
journal = {Nucleic Acids Res.},
volume = {51},
number = {{D1}},
pages = {9--17},
year = {2023},
url = {https://doi.org/10.1093/nar/gkac1098},
doi = {10.1093/NAR/GKAC1098},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ThakurBBFHHKKLLMMOPVVWZM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CantelliBBPMIHF22,
author = {Gaia Cantelli and
Alex Bateman and
Cath Brooksbank and
Anton I. Petrov and
Rahuman S. Malik{-}Sheriff and
Michele Ide{-}Smith and
Henning Hermjakob and
Paul Flicek and
Rolf Apweiler and
Ewan Birney and
Johanna R. McEntyre},
title = {The European Bioinformatics Institute {(EMBL-EBI)} in 2021},
journal = {Nucleic Acids Res.},
volume = {50},
number = {{D1}},
pages = {11--19},
year = {2022},
url = {https://doi.org/10.1093/nar/gkab1127},
doi = {10.1093/NAR/GKAB1127},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/CantelliBBPMIHF22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CantelliCBMFMBA21,
author = {Gaia Cantelli and
Guy Cochrane and
Cath Brooksbank and
Ellen M. McDonagh and
Paul Flicek and
Johanna R. McEntyre and
Ewan Birney and
Rolf Apweiler},
title = {The European Bioinformatics Institute: empowering cooperation in response
to a global health crisis},
journal = {Nucleic Acids Res.},
volume = {49},
number = {Database-Issue},
pages = {D29--D37},
year = {2021},
url = {https://doi.org/10.1093/nar/gkaa1077},
doi = {10.1093/NAR/GKAA1077},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CantelliCBMFMBA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CookLSCBBA19,
author = {Charles E. Cook and
Rodrigo Lopez and
Oana Stroe and
Guy Cochrane and
Cath Brooksbank and
Ewan Birney and
Rolf Apweiler},
title = {The European Bioinformatics Institute in 2018: tools, infrastructure
and training},
journal = {Nucleic Acids Res.},
volume = {47},
number = {Database-Issue},
pages = {D15--D22},
year = {2019},
url = {https://doi.org/10.1093/nar/gky1124},
doi = {10.1093/NAR/GKY1124},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CookLSCBBA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/McGrathCSDBM19,
author = {Annette McGrath and
Katherine Champ and
Catherine A. Shang and
Ellen van Dam and
Cath Brooksbank and
Sarah L. Morgan},
title = {From trainees to trainers to instructors: Sustainably building a national
capacity in bioinformatics training},
journal = {PLoS Comput. Biol.},
volume = {15},
number = {6},
year = {2019},
url = {https://doi.org/10.1371/journal.pcbi.1006923},
doi = {10.1371/JOURNAL.PCBI.1006923},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/McGrathCSDBM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/MulderSBBGMPRRS18,
author = {Nicola J. Mulder and
Russell Schwartz and
Michelle D. Brazas and
Cath Brooksbank and
Bruno A. Ga{\"{e}}ta and
Sarah L. Morgan and
Mark A. Pauley and
Anne G. Rosenwald and
Gabriella Rustici and
Michael L. Sierk and
Tandy J. Warnow and
Lonnie R. Welch},
title = {The development and application of bioinformatics core competencies
to improve bioinformatics training and education},
journal = {PLoS Comput. Biol.},
volume = {14},
number = {2},
year = {2018},
url = {https://doi.org/10.1371/journal.pcbi.1005772},
doi = {10.1371/JOURNAL.PCBI.1005772},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/MulderSBBGMPRRS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/Carvalho-SilvaG18,
author = {Denise Carvalho{-}Silva and
Leyla J. Garc{\'{\i}}a and
Sarah L. Morgan and
Cath Brooksbank and
Ian Dunham},
title = {Ten simple rules for delivering live distance training in bioinformatics
across the globe using webinars},
journal = {PLoS Comput. Biol.},
volume = {14},
number = {11},
year = {2018},
url = {https://doi.org/10.1371/journal.pcbi.1006419},
doi = {10.1371/JOURNAL.PCBI.1006419},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/Carvalho-SilvaG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/MaloneSJHPB16,
author = {James Malone and
Robert Stevens and
Simon Jupp and
Tom Hancocks and
Helen E. Parkinson and
Catherine Brooksbank},
title = {Ten Simple Rules for Selecting a Bio-ontology},
journal = {PLoS Comput. Biol.},
volume = {12},
number = {2},
year = {2016},
url = {https://doi.org/10.1371/journal.pcbi.1004743},
doi = {10.1371/JOURNAL.PCBI.1004743},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/MaloneSJHPB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/WelchBSMGKMMMPP16,
author = {Lonnie R. Welch and
Cath Brooksbank and
Russell Schwartz and
Sarah L. Morgan and
Bruno A. Ga{\"{e}}ta and
Alastair M. Kilpatrick and
Daniel Mietchen and
Benjamin L. Moore and
Nicola J. Mulder and
Mark A. Pauley and
William R. Pearson and
Predrag Radivojac and
Naomi Rosenberg and
Anne G. Rosenwald and
Gabriella Rustici and
Tandy J. Warnow},
title = {Applying, Evaluating and Refining Bioinformatics Core Competencies
(An Update from the Curriculum Task Force of ISCB's Education Committee)},
journal = {PLoS Comput. Biol.},
volume = {12},
number = {5},
year = {2016},
url = {https://doi.org/10.1371/journal.pcbi.1004943},
doi = {10.1371/JOURNAL.PCBI.1004943},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/WelchBSMGKMMMPP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrooksbankBABT14,
author = {Catherine Brooksbank and
Mary Todd Bergman and
Rolf Apweiler and
Ewan Birney and
Janet M. Thornton},
title = {The European Bioinformatics Institute's data resources 2014},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {18--25},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1206},
doi = {10.1093/NAR/GKT1206},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrooksbankBABT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/WelchLSBRGS14,
author = {Lonnie R. Welch and
Fran Lewitter and
Russell Schwartz and
Catherine Brooksbank and
Predrag Radivojac and
Bruno A. Ga{\"{e}}ta and
Maria Victoria Schneider},
title = {Bioinformatics Curriculum Guidelines: Toward a Definition of Core
Competencies},
journal = {PLoS Comput. Biol.},
volume = {10},
number = {3},
year = {2014},
url = {https://doi.org/10.1371/journal.pcbi.1003496},
doi = {10.1371/JOURNAL.PCBI.1003496},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/WelchLSBRGS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ViaBBBBBRDFGJJLMMNRSA13,
author = {Allegra Via and
Thomas Blicher and
Erik Bongcam{-}Rudloff and
Michelle D. Brazas and
Catherine Brooksbank and
Aidan Budd and
Javier De Las Rivas and
Jacqueline Dreyer and
Pedro L. Fernandes and
Celia W. G. van Gelder and
Joachim Jacob and
Rafael C. Jim{\'{e}}nez and
Jane E. Loveland and
Federico Mor{\'{a}}n and
Nicola J. Mulder and
Tommi H. Nyr{\"{o}}nen and
Kristian Rother and
Maria Victoria Schneider and
Teresa K. Attwood},
title = {Best practices in bioinformatics training for life scientists},
journal = {Briefings Bioinform.},
volume = {14},
number = {5},
pages = {528--537},
year = {2013},
url = {https://doi.org/10.1093/bib/bbt043},
doi = {10.1093/BIB/BBT043},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ViaBBBBBRDFGJJLMMNRSA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JimenezAB13,
author = {Rafael C. Jim{\'{e}}nez and
Juan P. Albar and
Jong Bhak and
Marie{-}Claude Blatter and
Thomas Blicher and
Michelle D. Brazas and
Catherine Brooksbank and
Aidan Budd and
Javier De Las Rivas and
Jacqueline Dreyer and
Marc A. van Driel and
Michael J. Dunn and
Pedro L. Fernandes and
Celia W. G. van Gelder and
Henning Hermjakob and
Vassilios Ioannidis and
David Phillip Judge and
Pascal Kahlem and
Eija Korpelainen and
Hans{-}Joachim Kraus and
Jane E. Loveland and
Christine Mayer and
Jennifer McDowall and
Federico Mor{\'{a}}n and
Nicola J. Mulder and
Tommi H. Nyr{\"{o}}nen and
Kristian Rother and
Gustavo A. Salazar and
Reinhard Schneider and
Allegra Via and
Jose M. Villaveces and
Ping Yu and
Maria Victoria Schneider and
Teresa K. Attwood and
Manuel Corpas},
title = {iAnn: an event sharing platform for the life sciences},
journal = {Bioinform.},
volume = {29},
number = {15},
pages = {1919--1921},
year = {2013},
url = {https://doi.org/10.1093/bioinformatics/btt306},
doi = {10.1093/BIOINFORMATICS/BTT306},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JimenezAB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SchneiderWBWBRBVGJFNRBJLMJVLAB12,
author = {Maria Victoria Schneider and
Peter Walter and
Marie{-}Claude Blatter and
James Watson and
Michelle D. Brazas and
Kristian Rother and
Aidan Budd and
Allegra Via and
Celia W. G. van Gelder and
Joachim Jacob and
Pedro L. Fernandes and
Tommi H. Nyr{\"{o}}nen and
Javier De Las Rivas and
Thomas Blicher and
Rafael C. Jim{\'{e}}nez and
Jane E. Loveland and
Jennifer McDowall and
Philip Jones and
Brendan W. Vaughan and
Rodrigo Lopez and
Teresa K. Attwood and
Catherine Brooksbank},
title = {Bioinformatics Training Network {(BTN):} a community resource for
bioinformatics trainers},
journal = {Briefings Bioinform.},
volume = {13},
number = {3},
pages = {383--389},
year = {2012},
url = {https://doi.org/10.1093/bib/bbr064},
doi = {10.1093/BIB/BBR064},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SchneiderWBWBRBVGJFNRBJLMJVLAB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/PavelinCMBCS12,
author = {Katrina Pavelin and
Jennifer A. Cham and
Paula de Matos and
Catherine Brooksbank and
Graham Cameron and
Christoph Steinbeck},
title = {Bioinformatics Meets User-Centred Design: {A} Perspective},
journal = {PLoS Comput. Biol.},
volume = {8},
number = {7},
year = {2012},
url = {https://doi.org/10.1371/journal.pcbi.1002554},
doi = {10.1371/JOURNAL.PCBI.1002554},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/PavelinCMBCS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SchneiderWARBMVFNBJBRJGB10,
author = {Maria Victoria Schneider and
James Watson and
Teresa K. Attwood and
Kristian Rother and
Aidan Budd and
Jennifer McDowall and
Allegra Via and
Pedro L. Fernandes and
Tommi H. Nyr{\"{o}}nen and
Thomas Blicher and
Philip Jones and
Marie{-}Claude Blatter and
Javier De Las Rivas and
David Phillip Judge and
Wouter van der Gool and
Catherine Brooksbank},
title = {Bioinformatics training: a review of challenges, actions and support
requirements},
journal = {Briefings Bioinform.},
volume = {11},
number = {6},
pages = {544--551},
year = {2010},
url = {https://doi.org/10.1093/bib/bbq021},
doi = {10.1093/BIB/BBQ021},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SchneiderWARBMVFNBJBRJGB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WrightVLLBS10,
author = {Victoria Ann Wright and
Brendan W. Vaughan and
Thomas Laurent and
Rodrigo Lopez and
Catherine Brooksbank and
Maria Victoria Schneider},
title = {Bioinformatics training: selecting an appropriate learning content
management system - an example from the European Bioinformatics Institute},
journal = {Briefings Bioinform.},
volume = {11},
number = {6},
pages = {552--562},
year = {2010},
url = {https://doi.org/10.1093/bib/bbq023},
doi = {10.1093/BIB/BBQ023},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/WrightVLLBS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrooksbankCT10,
author = {Catherine Brooksbank and
Graham Cameron and
Janet M. Thornton},
title = {The European Bioinformatics Institute's data resources},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {17--25},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp986},
doi = {10.1093/NAR/GKP986},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrooksbankCT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrooksbankCT05,
author = {Catherine Brooksbank and
Graham Cameron and
Janet M. Thornton},
title = {The European Bioinformatics Institute's data resources: towards systems
biology},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Database-Issue},
pages = {46--53},
year = {2005},
url = {https://doi.org/10.1093/nar/gki026},
doi = {10.1093/NAR/GKI026},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrooksbankCT05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ThorntonGB04,
author = {Janet M. Thornton and
David R. Gilbert and
Catherine Brooksbank},
title = {{ISMB/ECCB} 2004},
booktitle = {Proceedings Twelfth International Conference on Intelligent Systems
for Molecular Biology/Third European Conference on Computational Biology
2004, Glasgow, UK, July 31-August 4, 2004},
pages = {1--2},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth950},
doi = {10.1093/BIOINFORMATICS/BTH950},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/ThorntonGB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ThorntonGB04a,
author = {Janet M. Thornton and
David R. Gilbert and
Catherine Brooksbank},
title = {{ISMB/ECCB} 2004 Organization},
booktitle = {Proceedings Twelfth International Conference on Intelligent Systems
for Molecular Biology/Third European Conference on Computational Biology
2004, Glasgow, UK, July 31-August 4, 2004},
pages = {3--5},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth951},
doi = {10.1093/BIOINFORMATICS/BTH951},
timestamp = {Wed, 24 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/ThorntonGB04a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrooksbankCHMMMOPTABBHLSSC03,
author = {Catherine Brooksbank and
Evelyn Camon and
Midori A. Harris and
Michele Magrane and
Maria Jesus Martin and
Nicola J. Mulder and
Claire O'Donovan and
Helen E. Parkinson and
Mary Ann Tuli and
Rolf Apweiler and
Ewan Birney and
Alvis Brazma and
Kim Henrick and
Rodrigo Lopez and
Guenter Stoesser and
Peter Stoehr and
Graham Cameron},
title = {The European Bioinformatics Institute's data resources},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {43--50},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg066},
doi = {10.1093/NAR/GKG066},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrooksbankCHMMMOPTABBHLSSC03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BallSPRBCCGHHRSSSTBQ02,
author = {Catherine A. Ball and
Gavin Sherlock and
Helen E. Parkinson and
Philippe Rocca{-}Serra and
Catherine Brooksbank and
Helen C. Causton and
Duccio Cavalieri and
Terry Gaasterland and
Pascal Hingamp and
Frank C. P. Holstege and
Martin Ringwald and
Paul T. Spellman and
Christian J. Stoeckert Jr. and
Jason E. Stewart and
Ronald C. Taylor and
Alvis Brazma and
John Quackenbush},
title = {An open letter to the scientific journals},
journal = {Bioinform.},
volume = {18},
number = {11},
pages = {1409},
year = {2002},
url = {https://doi.org/10.1093/bioinformatics/18.11.1409},
doi = {10.1093/BIOINFORMATICS/18.11.1409},
timestamp = {Tue, 28 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BallSPRBCCGHHRSSSTBQ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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