BibTeX records: Erik Bongcam-Rudloff

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@article{DBLP:journals/ploscb/DammeHVMBB21,
  author       = {Renaud Van Damme and
                  Martin H{\"{o}}lzer and
                  Adrian Viehweger and
                  Bettina M{\"{u}}ller and
                  Erik Bongcam{-}Rudloff and
                  Christian Brandt},
  title        = {Metagenomics workflow for hybrid assembly, differential coverage binning,
                  metatranscriptomics and pathway analysis {(MUFFIN)}},
  journal      = {PLoS Comput. Biol.},
  volume       = {17},
  number       = {2},
  year         = {2021},
  url          = {https://doi.org/10.1371/journal.pcbi.1008716},
  doi          = {10.1371/JOURNAL.PCBI.1008716},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/DammeHVMBB21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/f1000research/HollmannKBTGRTGBENFSRD20,
  author       = {Susanne Hollmann and
                  Andreas Kremer and
                  Spela Baebler and
                  Christophe Trefois and
                  Kristina Gruden and
                  Witold R. Rudnicki and
                  Weida Tong and
                  Aleksandra Gruca and
                  Erik Bongcam{-}Rudloff and
                  Chris T. A. Evelo and
                  Alina S. Nechyporenko and
                  Marcus Frohme and
                  David Safr{\'{a}}nek and
                  Babette Regierer and
                  Domenica D'Elia},
  title        = {The need for standardisation in life science research - an approach
                  to excellence and trust},
  journal      = {F1000Research},
  volume       = {9},
  pages        = {1398},
  year         = {2020},
  url          = {https://doi.org/10.12688/f1000research.27500.1},
  doi          = {10.12688/F1000RESEARCH.27500.1},
  timestamp    = {Fri, 21 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/HollmannKBTGRTGBENFSRD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/GourleKHB19,
  author       = {Hadrien Gourl{\'{e}} and
                  Oskar Karlsson{-}Lindsj{\"{o}} and
                  Juliette Hayer and
                  Erik Bongcam{-}Rudloff},
  title        = {Simulating Illumina metagenomic data with InSilicoSeq},
  journal      = {Bioinform.},
  volume       = {35},
  number       = {3},
  pages        = {521--522},
  year         = {2019},
  url          = {https://doi.org/10.1093/bioinformatics/bty630},
  doi          = {10.1093/BIOINFORMATICS/BTY630},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GourleKHB19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/ictinnovations/HollmannABDDEFM18,
  author       = {Susanne Hollmann and
                  Teresa K. Attwood and
                  Erik Bongcam{-}Rudloff and
                  Deborah Duca and
                  Domenica D'Elia and
                  Christoph Endrullat and
                  Marcus Frohme and
                  Katrin Messerschmidt and
                  Babette Regierer},
  editor       = {Slobodan Kalajdziski and
                  Nevena Ackovska},
  title        = {Standardization and Quality Assurance in Life-Science Research - Crucially
                  Needed or Unnecessary and Annoying Regulation?},
  booktitle    = {{ICT} Innovations 2018. Engineering and Life Sciences - 10th International
                  Conference, {ICT} Innovations 2018, Ohrid, Macedonia, September 17-19,
                  2018, Proceedings},
  series       = {Communications in Computer and Information Science},
  volume       = {940},
  pages        = {13--20},
  publisher    = {Springer},
  year         = {2018},
  url          = {https://doi.org/10.1007/978-3-030-00825-3\_2},
  doi          = {10.1007/978-3-030-00825-3\_2},
  timestamp    = {Sun, 12 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ictinnovations/HollmannABDDEFM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/Hernandez-de-Diego17,
  author       = {Rafael Hern{\'{a}}ndez{-}de{-}Diego and
                  Etienne Pierre de Villiers and
                  Tomas Klingstr{\"{o}}m and
                  Hadrien Gourl{\'{e}} and
                  Ana Conesa and
                  Erik Bongcam{-}Rudloff},
  title        = {The eBioKit, a stand-alone educational platform for bioinformatics},
  journal      = {PLoS Comput. Biol.},
  volume       = {13},
  number       = {9},
  year         = {2017},
  url          = {https://doi.org/10.1371/journal.pcbi.1005616},
  doi          = {10.1371/JOURNAL.PCBI.1005616},
  timestamp    = {Tue, 13 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/Hernandez-de-Diego17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/CorpasJBBBFGGKLMMPRTVWSA15,
  author       = {Manuel Corpas and
                  Rafael C. Jim{\'{e}}nez and
                  Erik Bongcam{-}Rudloff and
                  Aidan Budd and
                  Michelle D. Brazas and
                  Pedro L. Fernandes and
                  Bruno A. Ga{\"{e}}ta and
                  Celia W. G. van Gelder and
                  Eija Korpelainen and
                  Fran Lewitter and
                  Annette McGrath and
                  Daniel MacLean and
                  Patricia M. Palagi and
                  Kristian Rother and
                  Jan Taylor and
                  Allegra Via and
                  Mick Watson and
                  Maria Victoria Schneider and
                  Teresa K. Attwood},
  title        = {The {GOBLET} training portal: a global repository of bioinformatics
                  training materials, courses and trainers},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {1},
  pages        = {140--142},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btu601},
  doi          = {10.1093/BIOINFORMATICS/BTU601},
  timestamp    = {Thu, 25 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/CorpasJBBBFGGKLMMPRTVWSA15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/AtwoodBBCGLMPSG15,
  author       = {Teresa K. Attwood and
                  Erik Bongcam{-}Rudloff and
                  Michelle D. Brazas and
                  Manuel Corpas and
                  Pascale Gaudet and
                  Fran Lewitter and
                  Nicola J. Mulder and
                  Patricia M. Palagi and
                  Maria Victoria Schneider and
                  Celia W. G. van Gelder},
  title        = {{GOBLET:} The Global Organisation for Bioinformatics Learning, Education
                  and Training},
  journal      = {PLoS Comput. Biol.},
  volume       = {11},
  number       = {4},
  year         = {2015},
  url          = {https://doi.org/10.1371/journal.pcbi.1004143},
  doi          = {10.1371/JOURNAL.PCBI.1004143},
  timestamp    = {Mon, 03 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ploscb/AtwoodBBCGLMPSG15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/MasseroliMBCKRLR14,
  author       = {Marco Masseroli and
                  Barend Mons and
                  Erik Bongcam{-}Rudloff and
                  Stefano Ceri and
                  Alexander E. Kel and
                  Fran{\c{c}}ois Rechenmann and
                  Fr{\'{e}}d{\'{e}}rique Lisacek and
                  Paolo Romano},
  title        = {Integrated Bio-Search: challenges and trends for the integration,
                  search and comprehensive processing of biological information},
  journal      = {{BMC} Bioinform.},
  volume       = {15},
  number       = {{S-1}},
  pages        = {S2},
  year         = {2014},
  url          = {https://doi.org/10.1186/1471-2105-15-S1-S2},
  doi          = {10.1186/1471-2105-15-S1-S2},
  timestamp    = {Thu, 29 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/MasseroliMBCKRLR14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/Gomez-CabreroAMTMGBBCT14,
  author       = {David Gomez{-}Cabrero and
                  Imad Abugessaisa and
                  Dieter Maier and
                  Andrew E. Teschendorff and
                  Matthias Merkenschlager and
                  Andreas Gisel and
                  Esteban Ballestar and
                  Erik Bongcam{-}Rudloff and
                  Ana Conesa and
                  Jesper Tegn{\'{e}}r},
  title        = {Data integration in the era of omics: current and future challenges},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  number       = {{S-2}},
  pages        = {I1},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-S2-I1},
  doi          = {10.1186/1752-0509-8-S2-I1},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/Gomez-CabreroAMTMGBBCT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bib/ViaBBBBBRDFGJJLMMNRSA13,
  author       = {Allegra Via and
                  Thomas Blicher and
                  Erik Bongcam{-}Rudloff and
                  Michelle D. Brazas and
                  Catherine Brooksbank and
                  Aidan Budd and
                  Javier De Las Rivas and
                  Jacqueline Dreyer and
                  Pedro L. Fernandes and
                  Celia W. G. van Gelder and
                  Joachim Jacob and
                  Rafael C. Jim{\'{e}}nez and
                  Jane E. Loveland and
                  Federico Mor{\'{a}}n and
                  Nicola J. Mulder and
                  Tommi H. Nyr{\"{o}}nen and
                  Kristian Rother and
                  Maria Victoria Schneider and
                  Teresa K. Attwood},
  title        = {Best practices in bioinformatics training for life scientists},
  journal      = {Briefings Bioinform.},
  volume       = {14},
  number       = {5},
  pages        = {528--537},
  year         = {2013},
  url          = {https://doi.org/10.1093/bib/bbt043},
  doi          = {10.1093/BIB/BBT043},
  timestamp    = {Thu, 25 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/ViaBBBBBRDFGJJLMMNRSA13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biodb/SmedleySCAABBBBBBCCEFGGGHLMMRRRSSTZH10,
  author       = {Damian Smedley and
                  Paul N. Schofield and
                  Chao{-}Kung Chen and
                  Vassilis Aidinis and
                  Crysanthi Ainali and
                  Jonathan B. L. Bard and
                  Rudi Balling and
                  Ewan Birney and
                  Andrew Blake and
                  Erik Bongcam{-}Rudloff and
                  Anthony J. Brookes and
                  Gianni Cesareni and
                  Christina Chandras and
                  Janan T. Eppig and
                  Paul Flicek and
                  Georgios V. Gkoutos and
                  Simon Greenaway and
                  Michael Gruenberger and
                  Jean{-}Karim H{\'{e}}rich{\'{e}} and
                  Andrew Lyall and
                  Ann{-}Marie Mallon and
                  Dawn Muddyman and
                  Florian Reisinger and
                  Martin Ringwald and
                  Nadia A. Rosenthal and
                  Klaus Schughart and
                  Morris A. Swertz and
                  Gudmundur A. Thorisson and
                  Michael Zouberakis and
                  John M. Hancock},
  title        = {Finding and sharing: new approaches to registries of databases and
                  services for the biomedical sciences},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2010},
  year         = {2010},
  url          = {https://doi.org/10.1093/database/baq014},
  doi          = {10.1093/DATABASE/BAQ014},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biodb/SmedleySCAABBBBBBCCEFGGGHLMMRRRSSTZH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/PettiferIKTMJLFRIPBURBRHSSCBSBACV10,
  author       = {Steve Pettifer and
                  Jon C. Ison and
                  Mat{\'{u}}s Kalas and
                  Dave Thorne and
                  Philip McDermott and
                  Inge Jonassen and
                  Ali Liaquat and
                  Jos{\'{e}} Mar{\'{\i}}a Fern{\'{a}}ndez and
                  Jose Manuel Rodriguez and
                  David G. Pisano and
                  Christophe Blanchet and
                  Mahmut Uludag and
                  Peter M. Rice and
                  Edita Bartaseviciute and
                  Kristoffer Rapacki and
                  Maarten L. Hekkelman and
                  Olivier Sand and
                  Heinz Stockinger and
                  Andrew B. Clegg and
                  Erik Bongcam{-}Rudloff and
                  Jean Salzemann and
                  Vincent Breton and
                  Teresa K. Attwood and
                  Graham Cameron and
                  Gert Vriend},
  title        = {The {EMBRACE} web service collection},
  journal      = {Nucleic Acids Res.},
  volume       = {38},
  number       = {Web-Server-Issue},
  pages        = {683--688},
  year         = {2010},
  url          = {https://doi.org/10.1093/nar/gkq297},
  doi          = {10.1093/NAR/GKQ297},
  timestamp    = {Fri, 07 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/PettiferIKTMJLFRIPBURBRHSSCBSBACV10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/BarrioLSBB09,
  author       = {Alvaro Martinez Barrio and
                  Erik Lagercrantz and
                  G{\"{o}}ran O. Sperber and
                  Jonas Blomberg and
                  Erik Bongcam{-}Rudloff},
  title        = {Annotation and visualization of endogenous retroviral sequences using
                  the Distributed Annotation System {(DAS)} and eBioX},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  number       = {{S-6}},
  year         = {2009},
  url          = {https://doi.org/10.1186/1471-2105-10-S6-S18},
  doi          = {10.1186/1471-2105-10-S6-S18},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/BarrioLSBB09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/DEliaGEKMKB09,
  author       = {Domenica D'Elia and
                  Andreas Gisel and
                  Nils{-}Einar Eriksson and
                  Sophia Kossida and
                  Kimmo Mattila and
                  Lubos Klucar and
                  Erik Bongcam{-}Rudloff},
  title        = {The 20\({}^{\mbox{th}}\) anniversary of EMBnet: 20 years of bioinformatics
                  for the Life Sciences community},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  number       = {{S-6}},
  year         = {2009},
  url          = {https://doi.org/10.1186/1471-2105-10-S6-S1},
  doi          = {10.1186/1471-2105-10-S6-S1},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/DEliaGEKMKB09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/bibe/Bongcam-Rudloff08,
  author       = {Erik Bongcam{-}Rudloff},
  title        = {"Biobanks, biomolecular resources and bioinformatics for health
                  care and medical research in Europe"},
  booktitle    = {Proceedings of the 8th {IEEE} International Conference on Bioinformatics
                  and Bioengineering, {BIBE} 2008, October 8-10, 2008, Athens, Greece},
  pages        = {1},
  publisher    = {{IEEE}},
  year         = {2008},
  url          = {https://doi.org/10.1109/BIBE.2008.4696647},
  doi          = {10.1109/BIBE.2008.4696647},
  timestamp    = {Wed, 16 Oct 2019 14:14:56 +0200},
  biburl       = {https://dblp.org/rec/conf/bibe/Bongcam-Rudloff08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/BarrioSNGHB07,
  author       = {Alvaro Martinez Barrio and
                  Daniel Soeria{-}Atmadja and
                  Anders Nist{\'{e}}r and
                  Mats G. Gustafsson and
                  Ulf Hammerling and
                  Erik Bongcam{-}Rudloff},
  title        = {{EVALLER:} a web server for \emph{in silico} assessment of potential
                  protein allergenicity},
  journal      = {Nucleic Acids Res.},
  volume       = {35},
  number       = {Web-Server-Issue},
  pages        = {694--700},
  year         = {2007},
  url          = {https://doi.org/10.1093/nar/gkm370},
  doi          = {10.1093/NAR/GKM370},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/BarrioSNGHB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

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