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ORCIDBibTeX records: Bruce J. Aronow
@article{DBLP:journals/jbi/TanGHSGLDMHMBYCDZAABCHCLLMHOPSSATVW23,
author = {Amelia L. M. Tan and
Emily J. Getzen and
Meghan R. Hutch and
Zachary H. Strasser and
Alba Guti{\'{e}}rrez{-}Sacrist{\'{a}}n and
Trang T. Le and
Arianna Dagliati and
Michele Morris and
David A. Hanauer and
Bertrand Moal and
Clara{-}Lea Bonzel and
William Yuan and
Lorenzo Chiudinelli and
Priam Das and
Harrison G. Zhang and
Bruce J. Aronow and
Paul Avillach and
Gabriel A. Brat and
Tianxi Cai and
Chuan Hong and
William G. La Cava and
He Hooi Will Loh and
Yuan Luo and
Shawn N. Murphy and
Kee Yuan Hgiam and
Gilbert S. Omenn and
Lav P. Patel and
Malarkodi J. Samayamuthu and
Emily R. Shriver and
Zahra Shakeri Hossein Abad and
Byorn W. L. Tan and
Shyam Visweswaran and
Xuan Wang and
Griffin M. Weber and
Zongqi Xia and
Bertrand Verdy and
Qi Long and
Danielle L. Mowery and
John H. Holmes},
title = {Informative missingness: What can we learn from patterns in missing
laboratory data in the electronic health record?},
journal = {J. Biomed. Informatics},
volume = {139},
pages = {104306},
year = {2023},
url = {https://doi.org/10.1016/j.jbi.2023.104306},
doi = {10.1016/J.JBI.2023.104306},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/TanGHSGLDMHMBYCDZAABCHCLLMHOPSSATVW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/JinSLSPSA22,
author = {Kang Jin and
Daniel J. Schnell and
Guangyuan Li and
Nathan Salomonis and
V. B. Surya Prasath and
Rhonda Szczesniak and
Bruce J. Aronow},
title = {CellDrift: inferring perturbation responses in temporally sampled
single-cell data},
journal = {Briefings Bioinform.},
volume = {23},
number = {5},
year = {2022},
url = {https://doi.org/10.1093/bib/bbac324},
doi = {10.1093/BIB/BBAC324},
timestamp = {Tue, 06 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/JinSLSPSA22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jaciii/KatsumaKPA22,
author = {Daiki Katsuma and
Hiroharu Kawanaka and
V. B. Surya Prasath and
Bruce J. Aronow},
title = {Data Augmentation Using Generative Adversarial Networks for Multi-Class
Segmentation of Lung Confocal {IF} Images},
journal = {J. Adv. Comput. Intell. Intell. Informatics},
volume = {26},
number = {2},
pages = {138--146},
year = {2022},
url = {https://doi.org/10.20965/jaciii.2022.p0138},
doi = {10.20965/JACIII.2022.P0138},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jaciii/KatsumaKPA22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/ZhangDAXBXTABHM22,
author = {Harrison G. Zhang and
Arianna Dagliati and
Zahra Shakeri Hossein Abad and
Xin Xiong and
Clara{-}Lea Bonzel and
Zongqi Xia and
Bryce W. Q. Tan and
Paul Avillach and
Gabriel A. Brat and
Chuan Hong and
Michele Morris and
Shyam Visweswaran and
Lav P. Patel and
Alba Guti{\'{e}}rrez{-}Sacrist{\'{a}}n and
David A. Hanauer and
John H. Holmes and
Malarkodi Jebathilagam Samayamuthu and
Florence T. Bourgeois and
Sehi L'Yi and
Sarah E. Maidlow and
Bertrand Moal and
Shawn N. Murphy and
Zachary H. Strasser and
Antoine Neuraz and
Kee Yuan Ngiam and
Ne{-}Hooi Will Loh and
Gilbert S. Omenn and
Andrea Prunotto and
Lauren A. Dalvin and
Jeffrey G. Klann and
Petra Schubert and
Fernando J. Sanz Vidorreta and
Vincent Benoit and
Guillaume Verdy and
Ramakanth Kavuluru and
Hossein Estiri and
Yuan Luo and
Alberto Malovini and
Valentina Tibollo and
Riccardo Bellazzi and
Kelly Cho and
Yuk{-}Lam Ho and
Amelia L. M. Tan and
Byorn W. L. Tan and
Nils Gehlenborg and
Sara Lozano{-}Zahonero and
Vianney Jouhet and
Luca Chiovato and
Bruce J. Aronow and
Emma M. S. Toh and
Wei Gen Scott Wong and
Sara Pizzimenti and
Kavishwar B. Wagholikar and
Mauro Bucalo and
Tianxi Cai and
Andrew M. South and
Isaac S. Kohane and
Griffin M. Weber},
title = {International electronic health record-derived post-acute sequelae
profiles of {COVID-19} patients},
journal = {npj Digit. Medicine},
volume = {5},
year = {2022},
url = {https://doi.org/10.1038/s41746-022-00623-8},
doi = {10.1038/S41746-022-00623-8},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/ZhangDAXBXTABHM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MasciWNAHMAGYWP21,
author = {Anna Maria Masci and
Scott White and
Ben Neely and
Maryanne Ardini{-}Polaske and
Carol B. Hill and
Ravi S. Misra and
Bruce J. Aronow and
Nathan Gaddis and
Lina Yang and
Susan E. Wert and
Scott M. Palmer and
Cliburn Chan},
title = {Ontology-guided segmentation and object identification for developmental
mouse lung immunofluorescent images},
journal = {{BMC} Bioinform.},
volume = {22},
number = {1},
pages = {82},
year = {2021},
url = {https://doi.org/10.1186/s12859-021-04008-8},
doi = {10.1186/S12859-021-04008-8},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MasciWNAHMAGYWP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/IsakaKAP19,
author = {Shu Isaka and
Hiroharu Kawanaka and
Bruce J. Aronow and
V. B. Surya Prasath},
editor = {Illhoi Yoo and
Jinbo Bi and
Xiaohua Hu},
title = {Multi-Class Segmentation of Lung Immunofluorescence Confocal Images
Using Deep Learning},
booktitle = {2019 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2019, San Diego, CA, USA, November 18-21, 2019},
pages = {2362--2368},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBM47256.2019.8983146},
doi = {10.1109/BIBM47256.2019.8983146},
timestamp = {Fri, 09 Apr 2021 17:11:15 +0200},
biburl = {https://dblp.org/rec/conf/bibm/IsakaKAP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/CrawfordMDAB18,
author = {Dana C. Crawford and
Alexander A. Morgan and
Joshua C. Denny and
Bruce J. Aronow and
Steven E. Brenner},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Marylyn D. Ritchie and
Teri E. Klein},
title = {Session Introduction},
booktitle = {Biocomputing 2018: Proceedings of the Pacific Symposium, The Big Island
of Hawaii, Hawaii, USA, January 3-7, 2018},
pages = {389--399},
year = {2018},
url = {http://psb.stanford.edu/psb-online/proceedings/psb18/intro-pm.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/CrawfordMDAB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/YonekuraKPAT17,
author = {Asami Yonekura and
Hiroharu Kawanaka and
V. B. Surya Prasath and
Bruce J. Aronow and
Haruhiko Takase},
editor = {Xiaohua Hu and
Chi{-}Ren Shyu and
Yana Bromberg and
Jean Gao and
Yang Gong and
Dmitry Korkin and
Illhoi Yoo and
Huiru Jane Zheng},
title = {Improving the generalization of disease stage classification with
deep {CNN} for Glioma histopathological images},
booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
pages = {1222--1226},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/BIBM.2017.8217831},
doi = {10.1109/BIBM.2017.8217831},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/YonekuraKPAT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/MorganCDMAB17,
author = {Alexander A. Morgan and
Dana C. Crawford and
Joshua C. Denny and
Sean D. Mooney and
Bruce J. Aronow and
Steven E. Brenner},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Marylyn D. Ritchie and
Teri E. Klein},
title = {Session Introduction},
booktitle = {Biocomputing 2017: Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, January 3-7, 2017},
pages = {348--355},
year = {2017},
url = {http://psb.stanford.edu/psb-online/proceedings/psb17/intro-precmed.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/MorganCDMAB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nature/OlssonVCASSG16,
author = {Andre Olsson and
Meenakshi Venkatasubramanian and
Viren K. Chaudhri and
Bruce J. Aronow and
Nathan Salomonis and
Harinder Singh and
H. Leighton Grimes},
title = {Single-cell analysis of mixed-lineage states leading to a binary cell
fate choice},
journal = {Nat.},
volume = {537},
number = {7622},
pages = {698--702},
year = {2016},
url = {https://doi.org/10.1038/nature19348},
doi = {10.1038/NATURE19348},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nature/OlssonVCASSG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fuzzIEEE/FukumaPKAT16,
author = {Kiichi Fukuma and
V. B. Surya Prasath and
Hiroharu Kawanaka and
Bruce J. Aronow and
Haruhiko Takase},
title = {A study on feature extraction and disease stage classification for
Glioma pathology images},
booktitle = {2016 {IEEE} International Conference on Fuzzy Systems, {FUZZ-IEEE}
2016, Vancouver, BC, Canada, July 24-29, 2016},
pages = {2150--2156},
publisher = {{IEEE}},
year = {2016},
url = {https://doi.org/10.1109/FUZZ-IEEE.2016.7737958},
doi = {10.1109/FUZZ-IEEE.2016.7737958},
timestamp = {Wed, 16 Oct 2019 14:14:52 +0200},
biburl = {https://dblp.org/rec/conf/fuzzIEEE/FukumaPKAT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kes/FukumaPKAT16,
author = {Kiichi Fukuma and
V. B. Surya Prasath and
Hiroharu Kawanaka and
Bruce J. Aronow and
Haruhiko Takase},
editor = {Robert J. Howlett and
Lakhmi C. Jain and
Bogdan Gabrys and
Carlos Toro and
Chee Peng Lim},
title = {A Study on Nuclei Segmentation, Feature Extraction and Disease Stage
Classification for Human Brain Histopathological Images},
booktitle = {Knowledge-Based and Intelligent Information {\&} Engineering Systems:
Proceedings of the 20th International Conference KES-2016, York, UK,
5-7 September 2016},
series = {Procedia Computer Science},
volume = {96},
pages = {1202--1210},
publisher = {Elsevier},
year = {2016},
url = {https://doi.org/10.1016/j.procs.2016.08.164},
doi = {10.1016/J.PROCS.2016.08.164},
timestamp = {Thu, 08 Jul 2021 16:04:01 +0200},
biburl = {https://dblp.org/rec/conf/kes/FukumaPKAT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/MorganMAB16,
author = {Alexander A. Morgan and
Sean D. Mooney and
Bruce J. Aronow and
Steven E. Brenner},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Teri E. Klein and
Marylyn D. Ritchie},
title = {Session Introduction},
booktitle = {Biocomputing 2016: Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, January 4-8, 2016},
pages = {243--248},
year = {2016},
url = {http://psb.stanford.edu/psb-online/proceedings/psb16/intro-pm.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/MorganMAB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/PrasathFAK15,
author = {V. B. Surya Prasath and
Kiichi Fukuma and
Bruce J. Aronow and
Hiroharu Kawanaka},
editor = {Jun Huan and
Satoru Miyano and
Amarda Shehu and
Xiaohua Tony Hu and
Bin Ma and
Sanguthevar Rajasekaran and
Vijay K. Gombar and
Matthieu{-}P. Schapranow and
Illhoi Yoo and
Jiayu Zhou and
Brian Chen and
Vinay Pai and
Brian G. Pierce},
title = {Cell nuclei segmentation in glioma histopathology images with color
decomposition based active contours},
booktitle = {2015 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2015, Washington, DC, USA, November 9-12, 2015},
pages = {1734--1736},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/BIBM.2015.7359944},
doi = {10.1109/BIBM.2015.7359944},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/PrasathFAK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/healthcom/FukumaKPAT15,
author = {Kiichi Fukuma and
Hiroharu Kawanaka and
V. B. Surya Prasath and
Bruce J. Aronow and
Haruhiko Takase},
title = {Feature extraction and disease stage classification for Glioma histopathology
images},
booktitle = {17th International Conference on E-health Networking, Application
{\&} Services, HealthCom 2015, Boston, MA, USA, October 14-17,
2015},
pages = {598--599},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/HealthCom.2015.7454574},
doi = {10.1109/HEALTHCOM.2015.7454574},
timestamp = {Wed, 16 Oct 2019 14:14:55 +0200},
biburl = {https://dblp.org/rec/conf/healthcom/FukumaKPAT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CavalcoliWADK14,
author = {Jim Cavalcoli and
Lonnie R. Welch and
Bruce J. Aronow and
Sorin Draghici and
Daisuke Kihara},
title = {The International Society of Computational Biology presents: the Great
Lakes Bioinformatics Conference, May 16-18, 2014, Cincinnati, Ohio},
journal = {Bioinform.},
volume = {30},
number = {1},
pages = {148--149},
year = {2014},
url = {https://doi.org/10.1093/bioinformatics/btt673},
doi = {10.1093/BIOINFORMATICS/BTT673},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CavalcoliWADK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WuBJA14,
author = {Chao Wu and
Eric E. Bardes and
Anil G. Jegga and
Bruce J. Aronow},
title = {ToppMiR: ranking microRNAs and their mRNA targets based on biological
functions and context},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Webserver-Issue},
pages = {107--113},
year = {2014},
url = {https://doi.org/10.1093/nar/gku409},
doi = {10.1093/NAR/GKU409},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WuBJA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/scisisis/TamakiFKTTAC14,
author = {Kazuhiko Tamaki and
Kiichi Fukuma and
Hiroharu Kawanaka and
Haruhiko Takase and
Shinji Tsuruoka and
Bruce J. Aronow and
Shikha Chaganti},
title = {Comparative study on feature descriptors for brain image analysis},
booktitle = {2014 Joint 7th International Conference on Soft Computing and Intelligent
Systems {(SCIS)} and 15th International Symposium on Advanced Intelligent
Systems (ISIS), Kita-Kyushu, Japan, December 3-6, 2014},
pages = {679--682},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/SCIS-ISIS.2014.7044900},
doi = {10.1109/SCIS-ISIS.2014.7044900},
timestamp = {Wed, 16 Oct 2019 14:14:48 +0200},
biburl = {https://dblp.org/rec/conf/scisisis/TamakiFKTTAC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WuGAJ13,
author = {Chao Wu and
Ranga Chandra Gudivada and
Bruce J. Aronow and
Anil G. Jegga},
title = {Computational drug repositioning through heterogeneous network clustering},
journal = {{BMC} Syst. Biol.},
volume = {7},
number = {{S-5}},
pages = {S6},
year = {2013},
url = {https://doi.org/10.1186/1752-0509-7-S5-S6},
doi = {10.1186/1752-0509-7-S5-S6},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/WuGAJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/WuBAJB13,
author = {Chao Wu and
Arjun Bakshi and
Bruce J. Aronow and
Anil G. Jegga and
Raj Bhatnagar},
editor = {Wei Ding and
Takashi Washio and
Hui Xiong and
George Karypis and
Bhavani Thuraisingham and
Diane J. Cook and
Xindong Wu},
title = {A Biclustering Algorithm to Discover Functional Modules from {ENCODE}
ChIP-Seq Data},
booktitle = {13th {IEEE} International Conference on Data Mining Workshops, {ICDM}
Workshops, TX, USA, December 7-10, 2013},
pages = {96--103},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICDMW.2013.96},
doi = {10.1109/ICDMW.2013.96},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/WuBAJB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AzizATRKWK10,
author = {Ramy K. Aziz and
Bruce J. Aronow and
William L. Taylor and
Sarah Rowe and
Rita Kansal and
Mark J. Walker and
Malak Kotb},
title = {Integrating neighbor clustering, coexpression clustering and subsystems
analysis to define dynamic changes in regulatory networks associated
with group {A} streptococcal sociomicrobiology and niche adaptation},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-4}},
pages = {P12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S4-P12},
doi = {10.1186/1471-2105-11-S4-P12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AzizATRKWK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KaimalBTJA10,
author = {Vivek Kaimal and
Eric E. Bardes and
Scott C. Tabar and
Anil G. Jegga and
Bruce J. Aronow},
title = {ToppCluster: a multiple gene list feature analyzer for comparative
enrichment clustering and network-based dissection of biological systems},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Web-Server-Issue},
pages = {96--102},
year = {2010},
url = {https://doi.org/10.1093/nar/gkq418},
doi = {10.1093/NAR/GKQ418},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KaimalBTJA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SardanaVVCGAJ10,
author = {Divya Sardana and
Suresh Vasa and
Nishanth Vepachedu and
Jing Chen and
Ranga Chandra Gudivada and
Bruce J. Aronow and
Anil G. Jegga},
title = {PhenoHM: human-mouse comparative phenome-genome server},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Web-Server-Issue},
pages = {165--174},
year = {2010},
url = {https://doi.org/10.1093/nar/gkq472},
doi = {10.1093/NAR/GKQ472},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SardanaVVCGAJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenAJ09,
author = {Jing Chen and
Bruce J. Aronow and
Anil G. Jegga},
title = {Disease candidate gene identification and prioritization using protein
interaction networks},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-73},
doi = {10.1186/1471-2105-10-73},
timestamp = {Mon, 31 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenAJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenAJ09a,
author = {Jing Chen and
Bruce J. Aronow and
Anil G. Jegga},
title = {Correction: Disease candidate gene identification and prioritization
using protein interaction networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {406},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-406},
doi = {10.1186/1471-2105-10-406},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenAJ09a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QuGJNA09,
author = {Xiaoyan A. Qu and
Ranga Chandra Gudivada and
Anil G. Jegga and
Eric K. Neumann and
Bruce J. Aronow},
title = {Inferring novel disease indications for known drugs by semantically
linking drug action and disease mechanism relationships},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-5}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S5-S4},
doi = {10.1186/1471-2105-10-S5-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QuGJNA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChenBAJ09,
author = {Jing Chen and
Eric E. Bardes and
Bruce J. Aronow and
Anil G. Jegga},
title = {ToppGene Suite for gene list enrichment analysis and candidate gene
prioritization},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Web-Server-Issue},
pages = {305--311},
year = {2009},
url = {https://doi.org/10.1093/nar/gkp427},
doi = {10.1093/NAR/GKP427},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChenBAJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/GudivadaQCJNA08,
author = {Ranga Chandra Gudivada and
Xiaoyan A. Qu and
Jing Chen and
Anil G. Jegga and
Eric K. Neumann and
Bruce J. Aronow},
title = {Identifying disease-causal genes using Semantic Web-based representation
of integrated genomic and phenomic knowledge},
journal = {J. Biomed. Informatics},
volume = {41},
number = {5},
pages = {717--729},
year = {2008},
url = {https://doi.org/10.1016/j.jbi.2008.07.004},
doi = {10.1016/J.JBI.2008.07.004},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/GudivadaQCJNA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenXAJ07,
author = {Jing Chen and
Huan Xu and
Bruce J. Aronow and
Anil G. Jegga},
title = {Improved human disease candidate gene prioritization using mouse phenotype},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-392},
doi = {10.1186/1471-2105-8-392},
timestamp = {Mon, 31 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenXAJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuJSAM07,
author = {Xiangdong Liu and
Walter J. Jessen and
Siva Sivaganesan and
Bruce J. Aronow and
Mario Medvedovic},
title = {Bayesian hierarchical model for transcriptional module discovery by
jointly modeling gene expression and ChIP-chip data},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-283},
doi = {10.1186/1471-2105-8-283},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuJSAM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JeggaCGDGKKA07,
author = {Anil G. Jegga and
Jing Chen and
Sivakumar Gowrisankar and
Mrunal A. Deshmukh and
Ranga Chandra Gudivada and
Sue Kong and
Vivek Kaimal and
Bruce J. Aronow},
title = {GenomeTrafac: a whole genome resource for the detection of transcription
factor binding site clusters associated with conventional and microRNA
encoding genes conserved between mouse and human gene orthologs},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {116--121},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl1011},
doi = {10.1093/NAR/GKL1011},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JeggaCGDGKKA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JeggaGCA07,
author = {Anil G. Jegga and
Sivakumar Gowrisankar and
Jing Chen and
Bruce J. Aronow},
title = {PolyDoms: a whole genome database for the identification of non-synonymous
coding SNPs with the potential to impact disease},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {700--706},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl826},
doi = {10.1093/NAR/GKL826},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JeggaGCA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JeggaGGDCFA05,
author = {Anil G. Jegga and
Ashima Gupta and
Sivakumar Gowrisankar and
Mrunal A. Deshmukh and
Steven Connolly and
Kevin Finley and
Bruce J. Aronow},
title = {CisMols Analyzer: identification of compositionally similar \emph{cis}-element
clusters in ortholog conserved regions of coordinately expressed genes},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Web-Server-Issue},
pages = {408--411},
year = {2005},
url = {https://doi.org/10.1093/nar/gki486},
doi = {10.1093/NAR/GKI486},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JeggaGGDCFA05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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