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ORCIDHeikki Hyyrö
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2020 – today
- 2023
[c27]Heidi Kaarto
, Heikki Hyyrö, Marika Parviainen:
BeLLE: Multinational Research Collaboration on Bebras & ViLLE. ITiCSE (2) 2023: 669
2010 – 2019
- 2018
- [j12]Heikki Hyyrö, Shunsuke Inenaga:
Dynamic RLE-Compressed Edit Distance Tables Under General Weighted Cost Functions. Int. J. Found. Comput. Sci. 29(4): 623-645 (2018) - [j11]Shunsuke Inenaga, Heikki Hyyrö:
A hardness result and new algorithm for the longest common palindromic subsequence problem. Inf. Process. Lett. 129: 11-15 (2018) - [c26]Takafumi Inoue, Shunsuke Inenaga, Heikki Hyyrö, Hideo Bannai, Masayuki Takeda:
Computing longest common square subsequences. CPM 2018: 15:1-15:13 - [c25]Elizaveta Zimina, Jyrki Nummenmaa, Kalervo Järvelin, Jaakko Peltonen, Kostas Stefanidis, Heikki Hyyrö:
GQA: Grammatical Question Answering for RDF Data. SemWebEval@ESWC 2018: 82-97 - 2017
- [c24]Heikki Hyyrö:
Mining Bit-Parallel LCS-length Algorithms. SPIRE 2017: 214-220 - 2016
- [c23]Heikki Hyyrö, Shunsuke Inenaga:
Compacting a Dynamic Edit Distance Table by RLE Compression. SOFSEM 2016: 302-313 - [i1]Shunsuke Inenaga, Heikki Hyyrö:
A hardness result and new algorithm for the longest common palindromic subsequence problem. CoRR abs/1612.07475 (2016) - 2015
- [j10]Martti Juhola, Kirsi Penttinen, Henry Joutsijoki, Kirsi Varpa, Jyri Saarikoski, Jyrki Rasku, Harri Siirtola, Kati Iltanen, Jorma Laurikkala, Heikki Hyyrö, Jari A. K. Hyttinen, Katriina Aalto-Setälä:
Signal analysis and classification methods for the calcium transient data of stem cell-derived cardiomyocytes. Comput. Biol. Medicine 61: 1-7 (2015) - [j9]Heikki Hyyrö, Kazuyuki Narisawa, Shunsuke Inenaga:
Dynamic edit distance table under a general weighted cost function. J. Discrete Algorithms 34: 2-17 (2015) - 2014
- [c22]Martti Juhola, Henry Joutsijoki, Kirsi Varpa, Jyri Saarikoski, Jyrki Rasku, Kati Iltanen, Jorma Laurikkala, Heikki Hyyrö, Jorge Avalos-Salguero, Harri Siirtola, Kirsi Penttinen, Katriina Aalto-Setälä:
On computation of calcium cycling anomalies in cardiomyocytes data. EMBC 2014: 1444-1447 - 2010
- [c21]Heikki Hyyrö, Kazuyuki Narisawa, Shunsuke Inenaga:
Dynamic Edit Distance Table under a General Weighted Cost Function. SOFSEM 2010: 515-527
2000 – 2009
- 2009
- [c20]Heikki Hyyrö:
An Input Sensitive Online Algorithm for LCS Computation. Stringology 2009: 192-202 - [e1]Jussi Karlgren, Jorma Tarhio, Heikki Hyyrö:
String Processing and Information Retrieval, 16th International Symposium, SPIRE 2009, Saariselkä, Finland, August 25-27, 2009, Proceedings. Lecture Notes in Computer Science 5721, Springer 2009, ISBN 978-3-642-03783-2 [contents] - 2008
- [j8]Heikki Hyyrö:
Improving the bit-parallel NFA of Baeza-Yates and Navarro for approximate string matching. Inf. Process. Lett. 108(5): 313-319 (2008) - [c19]Heikki Hyyrö:
Notes on generating completely condensed d-neighborhoods. IWOCA 2008: 16-26 - [c18]Heikki Hyyrö:
An Efficient Linear Space Algorithm for Consecutive Suffix Alignment under Edit Distance (Short Preliminary Paper). SPIRE 2008: 155-163 - 2006
- [j7]Heikki Hyyrö, Gonzalo Navarro:
Bit-parallel Computation of Local Similarity Score Matrices with Unitary Weights. Int. J. Found. Comput. Sci. 17(6): 1325-1344 (2006) - [c17]Heikki Hyyrö:
Tighter Packed Bit-Parallel NFA for Approximate String Matching. CIAA 2006: 287-289 - 2005
- [j6]Heikki Hyyrö, Gonzalo Navarro:
Bit-Parallel Witnesses and Their Applications to Approximate String Matching. Algorithmica 41(3): 203-231 (2005) - [j5]Heikki Hyyrö, Martti Juhola, Mauno Vihinen:
On exact string matching of unique oligonucleotides. Comput. Biol. Medicine 35(2): 173-181 (2005) - [j4]Heikki Hyyrö:
Bit-parallel approximate string matching algorithms with transposition. J. Discrete Algorithms 3(2-4): 215-229 (2005) - [j3]Heikki Hyyrö, Kimmo Fredriksson, Gonzalo Navarro:
Increased bit-parallelism for approximate and multiple string matching. ACM J. Exp. Algorithmics 10 (2005) - [c16]Heikki Hyyrö, Yoan J. Pinzón, Ayumi Shinohara:
Fast Bit-Vector Algorithms for Approximate String Matching Under Indel Distance. SOFSEM 2005: 380-384 - [c15]Heikki Hyyrö:
Restricted Transposition Invariant Approximate String Matching Under Edit Distance. SPIRE 2005: 256-266 - [c14]Heikki Hyyrö, Gonzalo Navarro:
Bit-parallel computation of local similarity score matrices with unitary weights. Stringology 2005: 95-108 - [c13]Heikki Hyyrö, Yoan J. Pinzón, Ayumi Shinohara:
New Bit-Parallel Indel-Distance Algorithm. WEA 2005: 380-390 - 2004
- [j2]Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano:
An O(N2) Algorithm for Discovering Optimal Boolean Pattern Pairs. IEEE ACM Trans. Comput. Biol. Bioinform. 1(4): 159-170 (2004) - [c12]Heikki Hyyrö, Jun Takaba, Ayumi Shinohara, Masayuki Takeda:
On Bit-Parallel Processing of Multi-byte Text. AIRS 2004: 289-300 - [c11]Shunsuke Inenaga, Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano:
Finding Optimal Pairs of Cooperative and Competing Patterns with Bounded Distance. Discovery Science 2004: 32-46 - [c10]Heikki Hyyrö:
An Improvement and an Extension on the Hybrid Index for Approximate String Matching. SPIRE 2004: 208-209 - [c9]Heikki Hyyrö:
A Note on Bit-Parallel Alignment Computation. Stringology 2004: 79-87 - [c8]Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano:
Finding Optimal Pairs of Patterns. WABI 2004: 450-462 - [c7]Heikki Hyyrö, Kimmo Fredriksson, Gonzalo Navarro:
Increased Bit-Parallelism for Approximate String Matching. WEA 2004: 285-298 - 2003
- [b1]Heikki Hyyrö:
Practical Methods for Approximate String Matching. University of Tampere, Finland, 2003 - [j1]Heikki Hyyrö:
A Bit-Vector Algorithm for Computing Levenshtein and Damerau Edit Distances. Nord. J. Comput. 10(1): 29-39 (2003) - [c6]Heikki Hyyrö:
Bit-Parallel Approximate String Matching Algorithms with Transposition. SPIRE 2003: 95-107 - [c5]Heikki Hyyrö, Gonzalo Navarro:
A Practical Index for Genome Searching. SPIRE 2003: 341-349 - 2002
- [c4]Heikki Hyyrö, Gonzalo Navarro:
Faster Bit-Parallel Approximate String Matching. CPM 2002: 203-224 - [c3]Heikki Hyyrö:
A Bit-Vector Algorithm for Computing Levenshtein and Damerau Edit Distances. Stringology 2002: 44-54 - 2001
- [c2]Heikki Hyyrö, Mauno Vihinen, Martti Juhola:
On Approximate String Matching of Unique Oligonucleotides. MedInfo 2001: 960-964 - [c1]Heikki Hyyrö:
On Using Two-Phase Filtering in Indexed Approximate String Matching with Application to Searching Unique Oligonucleotides. SPIRE 2001: 84-95
Coauthor Index
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