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2020 – today
- 2023
[j20]Iván Martín Hernández
, Yves Dehouck, Ugo Bastolla, José Ramón López-Blanco, Pablo Chacón:
Predicting protein stability changes upon mutation using a simple orientational potential. Bioinform. 39(1) (2023)- 2022
- [j19]A. M. Aly, Pablo Chacón, H. Gol-Zaroudi, Jin-Woo Choi, George Z. Voyiadjis:
Proposed Practical Overheight Detection and Alert System. Autom. Control. Comput. Sci. 56(5): 467-480 (2022) - [j18]José Ramón López-Blanco, Yves Dehouck, Ugo Bastolla, Pablo Chacón:
Local Normal Mode Analysis for Fast Loop Conformational Sampling. J. Chem. Inf. Model. 62(18): 4561-4568 (2022) - [c4]Alberto Pepe, Joan Lasenby, Pablo Chacón:
Using a Graph Transformer Network to Predict 3D Coordinates of Proteins via Geometric Algebra Modelling. ENGAGE 2022: 83-95 - 2021
- [j17]Maria Kadukova, Karina dos Santos Machado, Pablo Chacón, Sergei Grudinin:
KORP-PL: a coarse-grained knowledge-based scoring function for protein-ligand interactions. Bioinform. 37(7): 943-950 (2021) - [j16]Chloé Quignot, Pierre Granger, Pablo Chacón, Raphaël Guérois, Jessica Andreani:
Atomic-level evolutionary information improves protein-protein interface scoring. Bioinform. 37(19): 3175-3181 (2021) - [j15]Chloé Quignot, Guillaume Postic, Hélène Bret, Julien Rey, Pierre Granger, Samuel Murail, Pablo Chacón, Jessica Andreani, Pierre Tufféry, Raphaël Guérois:
InterEvDock3: a combined template-based and free docking server with increased performance through explicit modeling of complex homologs and integration of covariation-based contact maps. Nucleic Acids Res. 49(Webserver-Issue): 277-284 (2021)
2010 – 2019
- 2019
- [j14]José Ramón López-Blanco, Pablo Chacón:
KORP: knowledge-based 6D potential for fast protein and loop modeling. Bioinform. 35(17): 3013-3019 (2019) - 2016
- [j13]Erney Ramírez-Aportela, José Ramón López-Blanco, Pablo Chacón:
FRODOCK 2.0: fast protein-protein docking server. Bioinform. 32(15): 2386-2388 (2016) - [j12]José Ignacio Aliaga, Pedro Alonso, José M. Badía, Pablo Chacón, Davor Davidovic, José Ramón López-Blanco, Enrique S. Quintana-Ortí:
A fast band-Krylov eigensolver for macromolecular functional motion simulation on multicore architectures and graphics processors. J. Comput. Phys. 309: 314-323 (2016) - [j11]José Ramón López-Blanco, Alejandro Jesús Canosa-Valls, Yaohang Li, Pablo Chacón:
RCD+: Fast loop modeling server. Nucleic Acids Res. 44(Webserver-Issue): W395-W400 (2016) - 2014
- [j10]José Ramón López-Blanco, José Ignacio Aliaga, Enrique S. Quintana-Ortí, Pablo Chacón:
iMODS: internal coordinates normal mode analysis server. Nucleic Acids Res. 42(Webserver-Issue): 271-276 (2014) - [c3]Santiago Garcia Sanchez, Erney Ramírez-Aportela, José Ignacio Garzón, Pablo Chacón, Antonio S. Montemayor, Raúl Cabido:
FRODRUG: A Virtual Screening GPU Accelerated Approach for Drug Discovery. PDP 2014: 594-600 - 2013
- [j9]José Ramón López-Blanco, Ruymán Reyes, José Ignacio Aliaga, Rosa M. Badia, Pablo Chacón, Enrique S. Quintana-Ortí:
Exploring large macromolecular functional motions on clusters of multicore processors. J. Comput. Phys. 246: 275-288 (2013) - 2012
- [j8]Pieter Chys, Pablo Chacón:
Spinor product computations for protein conformations. J. Comput. Chem. 33(21): 1717-1729 (2012) - 2011
- [j7]José Ramón López-Blanco, José Ignacio Garzón, Pablo Chacón:
iMod: multipurpose normal mode analysis in internal coordinates. Bioinform. 27(20): 2843-2850 (2011) - 2010
- [j6]José Ignacio Garzón, Eduardo Huedo, Rubén Santiago Montero, Ignacio Martín Llorente, Pablo Chacón:
End-To-End Cache System for Grid Computing: Design and Efficiency Analysis of a High-Throughput Bioinformatic Docking Application. Int. J. High Perform. Comput. Appl. 24(3): 243-264 (2010)
2000 – 2009
- 2009
- [j5]José Ignacio Garzón, José Ramón López-Blanco, Carles Pons, Julio A. Kovacs, Ruben Abagyan, Juan Fernández-Recio, Pablo Chacón:
FRODOCK: a new approach for fast rotational protein-protein docking. Bioinform. 25(19): 2544-2551 (2009) - 2007
- [j4]José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón:
ADP_EM: fast exhaustive multi-resolution docking for high-throughput coverage. Bioinform. 23(4): 427-433 (2007) - [j3]José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón:
DFprot: a webtool for predicting local chain deformability. Bioinform. 23(7): 901-902 (2007) - [j2]José Ignacio Garzón, Eduardo Huedo, Rubén S. Montero, Ignacio Martín Llorente, Pablo Chacón:
Adaptation of a Multi-Resolution Docking Bioinformatics Application to the Grid. J. Softw. 2(2): 1-10 (2007) - [c2]José Ignacio Garzón, Eduardo Huedo, Rubén S. Montero, Ignacio Martín Llorente, Pablo Chacón:
Grid Multi-Resolution Docking. PDP 2007: 3-10 - 2004
- [j1]Willy Wriggers, Pablo Chacón, Julio A. Kovacs, Florence Tama, Stefan Birmanns:
Topology representing neural networks reconcile biomolecular shape, structure, and dynamics. Neurocomputing 56: 365-379 (2004)
1990 – 1999
- 1995
- [c1]Juan Carlos Nuño, Pablo Chacón, Alvaro Moreno, Federico Morán:
Compartimentation in Replicator Models. ECAL 1995: 116-127 - [e1]Federico Morán, Alvaro Moreno, Juan Julián Merelo Guervós, Pablo Chacón:
Advances in Artificial Life, Third European Conference on Artificial Life, Granada, Spain, June 4-6, 1995, Proceedings. Lecture Notes in Computer Science 929, Springer 1995, ISBN 3-540-59496-5 [contents]
Coauthor Index
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