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SoftwareX, Volume 14
Volume 14, June 2021
- John Taylor Chavis III, Amy L. Cochran, Christopher J. Earls:
CU-MSDSp: A flexible parallelized Reversible jump Markov chain Monte Carlo method. 100664 - Michael Julian Orella, McLain Evan Leonard
, Yuriy Román-Leshkov, Fikile Richard Brushett:
High-throughput analysis of contact angle goniometry data using DropPy. 100665 - Martin Schlueter, Mehdi Neshat
, Mohamed Wahib, Masaharu Munetomo, Markus Wagner
:
GTOPX space mission benchmarks. 100666 - Tobias Weber
:
Update 2.0 to "Takin: An open-source software for experiment planning, visualisation, and data analysis", (PII: S2352711016300152). 100667 - Cristian Jimenez
, Iván Amaya, Rodrigo Correa:
SCSV_IPS: A software for the estimation of the shear coefficient of spin viscosity during the movement of a ferrofluid under the effect of an external rotating magnetic field. 100668 - Zoltan Csati
, Jean-François Witz, Vincent Magnier
, Ahmed El Bartali
, Nathalie Limodin
, Denis Najjar
:
CristalX: Facilitating simulations for experimentally obtained grain-based microstructures. 100669 - Zahrate El Oula Frihi, Julian Barreiro-Gomez, Salah Eddine Choutri, Hamidou Tembine:
Toolbox to simulate and mitigate COVID-19 propagation. 100673 - Lucas Gerardo Dominguez Ruben
, Kensuke Naito
, Ronald R. Gutierrez, Ricardo N. Szupiany
, Jorge D. Abad
:
Meander Statistics Toolbox (MStaT): A toolbox for geometry characterization of bends in large meandering channels. 100674 - Artur Karczmarczyk, Jaroslaw Jankowski
, Jaroslaw Watróbski
:
OONIS - Object-Oriented Network Infection Simulator. 100675 - Austen Bernardi
, Jessica M. J. Swanson
:
CycFlowDec: A Python module for decomposing flow networks using simple cycles. 100676 - Ryan P. Fisher, Gary Hemming
, Marie-Anne Bizouard
, Duncan A. Brown
, Peter Couvares, Florent Robinet, Didier Verkindt
:
DQSEGDB: A time-interval database for storing gravitational wave observatory metadata. 100677 - Marco Drago
, Sergey Klimenko, Claudia Lazzaro
, Edoardo Milotti
, Guenakh Mitselmakher
, Valentin Necula, Brendan O'Brian, Giovanni Andrea Prodi
, Francesco Salemi
, Marek J. Szczepanczyk, Shubhanshu Tiwari
, Vaibhav Tiwari
, Gayathri V, Gabriele Vedovato
, Igor Yakushin:
coherent WaveBurst, a pipeline for unmodeled gravitational-wave data analysis. 100678 - Edgar Fajardo Hernandez, Frank Würthwein, Brian Bockelman
, Miron Livny, Greg Thain
, James Alexander Clark, Peter Couvares, Josh Willis:
Adapting LIGO workflows to run in the Open Science Grid. 100679 - Kipp Cannon, Sarah Caudill
, Chiwai Chan, Bryce Cousins
, Jolien D. E. Creighton
, Becca Ewing, Heather Fong, Patrick Godwin, Chad Hanna, Shaun Hooper, Rachael Huxford, Ryan Magee, Duncan Meacher, Cody Messick, Soichiro Morisaki
, Debnandini Mukherjee
, Hiroaki Ohta, Alexander Pace, Stephen Privitera, Iris de Ruiter, Surabhi Sachdev, Leo Singer, Divya Singh, Ron Tapia, Leo Tsukada, Daichi Tsuna, Takuya Tsutsui, Koh Ueno, Aaron Viets, Leslie Wade, Madeline Wade
:
GstLAL: A software framework for gravitational wave discovery. 100680 - Seiki Ohnishi
:
Gxsview: Geometry and cross section viewer for calculating radiation transport. 100681 - Adam Mertel, David Zbíral
, Zdenek Stachon, Hana Horínková:
Historical geocoding assistant. 100682 - Collin J. Wilkinson, John C. Mauro:
Explorer.py: Mapping the energy landscapes of complex materials. 100683 - Vlad Atanasiu
, Rolf Ingold
:
Document Towers: A MATLAB software implementing a three-dimensional architectural paradigm for the visual exploration of digital documents and libraries. 100684 - Matthew T. Herritt
, Jacob C. Long, Mike D. Roybal, David C. Moller Jr., Todd C. Mockler, Duke Pauli, Alison L. Thompson:
FLIP: FLuorescence Imaging Pipeline for field-based chlorophyll fluorescence images. 100685 - Petri Laarne
, Martha Arbayani Zaidan
, Tuomo Nieminen
:
ennemi: Non-linear correlation detection with mutual information. 100686 - Claire Davies
:
SEDBYS: A python-based SED Builder for Young Stars. 100687 - Kim Miikki
, Alp Karakoç
, Mahdi Rafiee
, Duck Weon Lee, Jaana Vapaavuori
, Jennifer Tersteegen
, Laura Lemetti
, Jouni Paltakari:
An open-source camera system for experimental measurements. 100688 - Nazmus Sakib
, Shiyu Tian, Md Munirul Haque, Rumi Ahmed Khan, Sheikh Iqbal Ahamed
:
SepINav (Sepsis ICU Navigator): A data-driven software tool for sepsis monitoring and intervention using Bayesian Online Change Point Detection. 100689 - Federico Miretti
, Daniela Misul, Ezio Spessa
:
DynaProg: Deterministic Dynamic Programming solver for finite horizon multi-stage decision problems. 100690 - Nikolaos Batalas, Vassilis-Javed Khan, Panos Markopoulos:
Executable HTML. 100691 - Sebastian Deorowicz, Adam Gudys:
Whisper 2: Indel-sensitive short read mapping. 100692 - Laura Sani
, Michele Amoretti
, Stefano Cagnoni
, Monica Mordonini
, Riccardo Pecori
:
ReSS: A tool for discovering relevant sets in complex systems. 100693 - Filipe Assunção, Nuno Lourenço
, Bernardete Ribeiro, Penousal Machado:
Fast-DENSER: Fast Deep Evolutionary Network Structured Representation. 100694 - Boris I. Krasnopolsky
, Alexey V. Medvedev
:
XAMG: A library for solving linear systems with multiple right-hand side vectors. 100695 - Connor Powers
, Lindsay Bassman
, Thomas Linker
, Ken-ichi Nomura, Sahil Gulania, Rajiv K. Kalia, Aiichiro Nakano, Priya Vashishta:
MISTIQS: An open-source software for performing quantum dynamics simulations on quantum computers. 100696 - Kong Aik Lee
, Ville Vestman
, Tomi Kinnunen
:
ASVtorch toolkit: Speaker verification with deep neural networks. 100697 - Elizabeth D. Gregory
, William C. Schneck III, Erik L. Frankforter
:
swSim: Solid wave simulation. 100698 - Andrew Lyden
, Graeme Flett, Paul G. Tuohy
:
PyLESA: A Python modelling tool for planning-level Local, integrated, and smart Energy Systems Analysis. 100699 - Maximilian Coblenz
:
MATVines: A vine copula package for MATLAB. 100700 - Osezua Ibhadode
, Zhidong Zhang, Ali Bonakdar, Ehsan Toyserkani:
IbIPP for topology optimization - An Image-based Initialization and Post-Processing code written in MATLAB. 100701 - Berenice Talamantes-Becerra
, Jason Carling, Arthur Georges:
omicR: A tool to facilitate BLASTn alignments for sequence data. 100702 - Paul L. Raston
:
HeNDS: A program for calculating average Helium NanoDroplet Sizes. 100703 - Donghoh Kim
, Hee-Seok Oh, Guebin Choi
:
EPT: An R package for ensemble patch transform. 100704
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