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ORCIDSource Code for Biology and Medicine, Volume 6
Volume 6, 2011
- Xiang Zhang, Shunping Huang, Fei Zou, Wei Wang
:
Tools for efficient epistasis detection in genome-wide association study. 1 - Guorong Xu, Nan Deng, Zhiyu Zhao, Thair Judeh, Erik K. Flemington, Dongxiao Zhu:
SAMMate: a GUI tool for processing short read alignments in SAM/BAM format. 2 - Vineet K. Joshi, Johannes M. Freudenberg, Zhen Hu, Mario Medvedovic:
WebGimm: An integrated web-based platform for cluster analysis, functional analysis, and interactive visualization of results. 3 - Kenneth S. Kompass, Thomas J. Hoffmann, John S. Witte:
Parallel biocomputing. 4 - Ryan L. Webb, Avi Ma'ayan:
Sig2BioPAX: Java tool for converting flat files to BioPAX Level 3 format. 5 - Richard Newton, Andrew Deonarine, Lorenz Wernisch:
Creating web applications for spatial epidemiological analysis and mapping in R using Rwui. 6 - Layla Oesper, Daniele Merico, Ruth Isserlin, Gary D. Bader:
WordCloud: a Cytoscape plugin to create a visual semantic summary of networks. 7 - Kazuki Oshita, Kazuharu Arakawa, Masaru Tomita:
KBWS: an EMBOSS associated package for accessing bioinformatics web services. 8 - Timothy G. Bath, Selçuk Bozdag, Vackar Afzal, Daniel J. Crowther:
LimsPortal and BonsaiLIMS: development of a lab information management system for translational medicine. 9 - Kazuharu Misawa, Naoyuki Kamatani:
ParaHaplo 3.0: A program package for imputation and a haplotype-based whole-genome association study using hybrid parallel computing. 10 - Marco Galardini, Emanuele G. Biondi, Marco Bazzicalupo, Alessio Mengoni:
CONTIGuator: a bacterial genomes finishing tool for structural insights on draft genomes. 11 - Koji Kyoda, Kotaro Baba, Hiroaki Kitano, Shuichi Onami:
A proof of the DBRF-MEGN method, an algorithm for deducing minimum equivalent gene networks. 12 - Marc E. Colosimo, Matthew W. Peterson, Scott A. Mardis, Lynette Hirschman:
Nephele: genotyping via complete composition vectors and MapReduce. 13 - Ravi Vijaya Satya, Nela Zavaljevski, Jaques Reifman:
SNIT: SNP identification for strain typing. 14 - Caroline Baroukh, Sherry L. Jenkins, Ruth Dannenfelser, Avi Ma'ayan:
Genes2WordCloud: a quick way to identify biological themes from gene lists and free text. 15
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