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The R Journal, Volume 13
Volume 13, Number 1, 2021
- Boyoung Kim, Yunju Im, Keun Yoo Jae:
SEEDCCA: An Integrated R-Package for Canonical Correlation Analysis and Partial Least Squares. 7 - Ana López-Cheda, M. Amalia Jácome
, Ignacio López-de-Ullibarri
:
npcure: An R Package for Nonparametric Inference in Mixture Cure Models. 21 - Mark P. J. van der Loo:
A Method for Deriving Information from Running R Code. 42 - Hong Wang
, Ning Li, Shanpeng Li, Gang Li:
JMcmprsk: An R Package for Joint Modelling of Longitudinal and Survival Data with Competing Risks. 53 - Toby Dylan Hocking:
Wide-to-tall Data Reshaping Using Regular Expressions and the nc Package. 69 - Emmanuel Caron, Jérôme Dedecker, Bertrand Michel:
Linear Regression with Stationary Errors: the R Package slm. 83 - Falk Heße, Karina Cucchi, Nura Kawa, Yoram Rubin:
exPrior: An R Package for the Formulation of Ex-Situ Priors. 101 - Alessandro Beretta, Cédric Heuchenne:
penPHcure: Variable Selection in Proportional Hazards Cure Model with Time-Varying Covariates. 116 - Miguel Ferreiro-Díaz
, Tomás R. Cotos-Yáñez
, José Ramón Méndez
, David Ruano-Ordás
:
The bdpar Package: Big Data Pipelining Architecture for R. 130 - Moreno I. Coco
, Dan Mønster, Giuseppe Leonardi
, Rick Dale, Sebastian Wallot:
Unidimensional and Multidimensional Methods for Recurrence Quantification Analysis with crqa. 145 - Nora M. Villanueva
, Marta Sestelo
, Luís Meira-Machado
, Javier Roca-Pardiñas:
clustcurv: An R Package for Determining Groups in Multiple Curves. 164 - Eashwar V. Somasundaram, Shael E. Brown, Adam Litzler, Jacob G. Scott, Raoul R. Wadhwa
:
Benchmarking R packages for Calculation of Persistent Homology. 184 - Miguel Flores, Rubén Fernández-Casal
, Salvador Naya
, Javier Tarrío-Saavedra
:
Statistical Quality Control with the qcr Package. 194 - Markus Fritsch
, Adrian Yu Pua Andrew, Joachim Schnurbus:
pdynmc: A Package for Estimating Linear Dynamic Panel Data Models Based on Nonlinear Moment Conditions. 218 - Julio E. Sandubete
, Lorenzo Escot
:
DChaos: An R Package for Chaotic Time Series Analysis. 232 - Alejandro Saavedra-Nieves
, Paula Saavedra-Nieves:
IndexNumber: An R Package for Measuring the Evolution of Magnitudes. 253 - Genaro Sucarrat:
garchx: Flexible and Robust GARCH-X Modeling. 276 - Valeria Policastro
, Dario Righelli
, Annamaria Carissimo, Luisa Cutillo
, Italia De Feis
:
ROBustness In Network (robin): an R Package for Comparison and Validation of Communities. 292 - Ryan A. Peterson
:
Finding Optimal Normalizing Transformations via bestNormalize. 310 - Javier Roca-Pardiñas, María Xosé Rodríguez-Álvarez
, Stefan Sperlich:
Package wsbackfit for Smooth Backfitting Estimation of Generalized Structured Models. 330 - Sebastian Kreutzer
, Johannes Friedrich, Vasilis Pagonis, Christian Laag, Ena Rajovic, Christoph Schmidt
:
RLumCarlo: Simulating Cold Light using Monte Carlo Methods. 351 - Alexandre Brouste, Christophe Dutang, Darel Noutsa Mieniedou:
OneStep : Le Cam's One-step Estimation Procedure. 366 - Ezequiel Toum, Mariano H. Masiokas, Ricardo Villalba
, Pierre Pitte, Lucas Ruiz:
The HBV.IANIGLA Hydrological Model. 378 - Paul Walter:
The R Package smicd: Statistical Methods for Interval-Censored Data. 396 - John Hughes:
krippendorffsalpha: An R Package for Measuring Agreement Using Krippendorff's Alpha Coefficient. 413 - Majeed Simaan:
Working with CRSP/COMPUSTAT in R: Reproducible Empirical Asset Pricing. 426 - Raphael Sonabend
, Franz J. Király:
distr6: R6 Object-Oriented Probability Distributions Interface in R. 444 - Ostap Okhrin, Simon Trimborn
, Martin Waltz:
gofCopula: Goodness-of-Fit Tests for Copulae. 467 - Ana C. Cebrián, Jesús Asín
:
Analyzing Dependence between Point Processes in Time Using IndTestPP. 499 - Earo Wang, Dianne Cook
:
Conversations in Time: Interactive Visualization to Explore Structured Temporal Data. 516 - María Xosé Rodríguez-Álvarez
, Vanda Inácio:
ROCnReg: An R Package for Receiver Operating Characteristic Curve Inference With and Without Covariates. 525 - Michael J. Kane, Xun Jiang, Simon Urbanek
:
Automating Reproducible, Collaborative Clinical Trial Document Generation with the listdown Package. 556 - Michael J. Kane:
Towards a Grammar for Processing Clinical Trial Data. 563 - Daniel D. Sjoberg, Karissa Whiting, Michael Curry, Jessica A. Lavery, Joseph Larmarange
:
Reproducible Summary Tables with the gtsummary Package. 570 - Lucas Kook, Torsten Hothorn
:
Regularized Transformation Models: The tramnet Package. 581 - Brandon Bolte, Nicolás Schmidt, Sergio Béjar, Nguyen Huynh
, Bumba Mukherjee:
BayesSPsurv: An R Package to Estimate Bayesian (Spatial) Split-Population Survival Models. 595 - Rachael C. Aikens, Joseph Rigdon, Justin Lee, Michael T. M. Baiocchi, Andrew B. Goldstone, Peter Chiu, Y. Joseph Woo, Jonathan H. Chen:
stratamatch: Prognostic Score Stratification Using a Pilot Design. 614
Volume 13, Number 2, 2021
- Daniel Osório, Kelly Botero, Andrés Pinzón Velasco, Nicolás Mendoza-Mejía, Felipe Rojas-Rodríguez
, George E. Barreto, Janneth González
:
g2f as a Novel Tool to Find and Fill Gaps in Metabolic Networks. 6 - Håkon Otneim:
lg: An R package for Local Gaussian Approximations. 15 - Ran Xu:
Estimating Social Influence Effects in Networks Using A Latent Space Adjusted Approach in R. 18 - Gustavo Soutinho
, Marta Sestelo
, Luís Meira-Machado
:
survidm: An R package for Inference and Prediction in an Illness-Death Model. 22 - Jingchen Hu, Olanrewaju Akande, Quanli Wang:
Multiple Imputation and Synthetic Data Generation with NPBayesImputeCat. 25 - Novia Permatasari, Azka Ubaidillah:
msae: An R Package of Multivariate Fay-Herriot Models for Small Area Estimation. 28 - Javier Rodríguez-Cuadrado
, Juan C. Laria, David Delgado-Gómez:
cat.dt: An R package for fast construction of accurate Computerized Adaptive Tests using Decision Trees. 38 - Andrés Ramírez-Hassan, Mateo Graciano-Londoño:
A GUIded tour of Bayesian regression. 57 - Sébastien Wouters, Anne-Christine Da Silva, Frédéric Boulvain, Xavier Devleeschouwer:
StratigrapheR: Concepts for Litholog Generation in R. 70 - Rachid Boumaza, Pierre Santagostini, Smail Yousfi, Sabine Demotes-Mainard:
dad: an R Package for Visualisation, Classification and Discrimination of Multivariate Groups Modelled by their Densities. 90 - Thiago Rezende Dos Santos, Glaura C. Franco, Dani Gamerman:
NGSSEML: Non-Gaussian State Space with Exact Marginal Likelihood. 111 - Jinhui Yang, Lifeng Lin
, Haitao Chu:
BayesSenMC: an R package for Bayesian Sensitivity Analysis of Misclassification. 123 - Shaobo Li, Xiaorui Zhu, Yuejie Chen, Dungang Liu:
PAsso: an R Package for Assessing Partial Association between Ordinal Variables. 135 - Kazushi Maruo, Ryota Ishii, Yusuke Yamaguchi, Masahiko Gosho:
bcmixed: A Package for Median Inference on Longitudinal Data with the Box-Cox Transformation. 153 - Andrew G. Allmon, J. S. Marron, Michael G. Hudgens:
diproperm: An R Package for the DiProPerm Test. 179 - Henrik Bengtsson
:
A Unifying Framework for Parallel and Distributed Processing in R using Futures. 208 - Farhad Pishgar, Noah Greifer
, Clémence Leyrat
, Elizabeth A. Stuart:
MatchThem: : Matching and Weighting after Multiple Imputation. 228 - Kexuan Yang, Sang Kyu Lee, Jun Zhao, Hyoung-Moon Kim:
EMSS: New EM-type algorithms for the Heckman selection model in R. 239 - Darío Ramos-López
, Ana D. Maldonado:
Analysis of Corneal Data in R with the rPACI Package. 253 - António Pedro Duarte Silva, Paula Brito
, Peter Filzmoser, José G. Dias:
MAINT.Data: Modelling and Analysing Interval Data in R. 266 - Viviane Philipps, Boris P. Hejblum
, Mélanie Prague, Daniel Commenges, Cécile Proust-Lima
:
Robust and Efficient Optimization Using a Marquardt-Levenberg Algorithm with R Package marqLevAlg. 273 - Álvaro Briz-Redón, Francisco Martinez-Ruiz, Francisco Montes:
DRHotNet: An R package for detecting differential risk hotspots on a linear network. 292 - Bálint Tamási
, Torsten Hothorn
:
tramME: Mixed-Effects Transformation Models Using Template Model Builder. 306 - David Moriña, Gilma Hernández-Herrera, Albert Navarro
:
miRecSurv Package: Prentice-Williams-Peterson Models with Multiple Imputation of Unknown Number of Previous Episodes. 321 - Zhixin Lun, Ravindra Khattree:
An R package for Non-Normal Multivariate Distributions: Simulation and Probability Calculations from Multivariate Lomax (Pareto Type II) and Other Related Distributions. 336 - Tony Pourmohamad:
CompModels: A Suite of Computer Model Test Functions for Bayesian Optimization. 365 - Sebastian Juhl:
spfilteR: An R package for Semiparametric Spatial Filtering with Eigenvectors in (Generalized) Linear Models. 380 - Tianhai Zu, Yan Yu:
SIQR: An R Package for Single-index Quantile Regression. 398 - Yuliang Xu, Shuo Shuo Liu, Grace Y. Yi:
mgee2: An R package for marginal analysis of longitudinal ordinal data with misclassified responses and covariates. 419 - Rolf Turner:
A New Versatile Discrete Distribution. 427 - Ali Sabri Taylan, Güçkan Yapar, Hanife Taylan Selamlar:
Automatic Time Series Forecasting with Ata Method in R: ATAforecasting Package. 441 - Jinpu Li
, Ryan P. Knigge, Kaiyi Chen, Emily V. Leary:
PASSED: Calculate Power and Sample Size for Two Sample Tests. 450 - Jérémy Gelb:
spNetwork: A Package for Network Kernel Density Estimation. 460 - Jouni Helske
, Matti Vihola
:
bssm: Bayesian Inference of Non-linear and Non-Gaussian State Space Models in R. 471 - Rafael Ayala, Daniel Ayala, Lara Sellés Vidal
, David Ruiz:
openSkies - Integration of Aviation Data into the R Ecosystem. 485 - Jean-Paul Fox, Konrad Klotzke
, Duco Veen:
Generalized Linear Randomized Response Modeling using GLMMRR. 507 - H. Sherry Zhang, Dianne Cook
, Ursula Laa
, Nicolas Langrené
, Patricia Menéndez
:
Visual Diagnostics for Constrained Optimisation with Application to Guided Tours. 542 - Apostolos Chalkis, Vissarion Fisikopoulos:
volesti: Volume Approximation and Sampling for Convex Polytopes in R. 561 - Sladana Babic, Christophe Ley
, Marko Palangetic:
Elliptical Symmetry Tests in R. 578 - Adrian E. Raftery, Hana Sevcikova, Bernard W. Silverman:
The vote Package: Single Transferable Vote and Other Electoral Systems in R. 590 - Melina C. Vidoni
:
Software Engineering and R Programming: A Call for Research. 600 - Anthony-Alexander Christidis
, R. Douglas Martin:
RPESE: Risk and Performance Estimators Standard Errors with Serially Dependent Data. 624 - Gamze Güven
, Sükrü Acitas, Hatice Samkar, Birdal Senoglu:
RobustBF: An R Package for Robust Solution to the Behrens-Fisher Problem. 642 - William Michael Landau:
We Need Trustworthy R Packages. 661 - Maëlle Salmon, Karthik Ram:
The R Developer Community Does Have a Strong Software Engineering Culture. 673 - Simon Urbanek:
The R Quest: from Users to Developers. 697 - Melina C. Vidoni
:
Rejoinder: Software Engineering and R Programming. 713
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