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ORCID4th ICCABS 2014: Miami, FL, USA
- IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014, Miami, FL, USA, June 2-4, 2014. IEEE Computer Society 2014, ISBN 978-1-4799-5786-6
- Jacob Porter
, Ming-an Sun, Hehuang Xie, Liqing Zhang:
Improving bisulfite short-read mapping efficiency with hairpin-bisulfite data. 1-2 - David Sankoff, Baoyong Wang, Chunfang Zheng, Carlos Fernando Buen Abad Najar:
Structural vs. functional mechanisms of duplicate gene loss following whole genome doubling. 1-2 - Hsin-Ta Wu, Iman Hajirasouliha, Benjamin J. Raphael:
A combinatorial algorithm to identify independent and recurrent copy number aberrations across cancer types. 1 - Ayshwarya Subramanian, Russell Schwartz:
Reference-free inference of tumor phylogenies from single-cell sequencing data. 1 - Armin Töpfer, Niko Beerenwinkel:
Viral quasispecies assembly from paired-end reads. 1 - Vinhthuy T. Phan, Shanshan Gao, Quang Tran, Nam S. Vo:
How genome complexity can explain the hardness of aligning reads to genomes. 1-2 - Xijun Liang, Zhonghang Xia, Xinnan Niu, Andrew J. Link:
A weighted classification model for peptide identification. 1-2 - David Allen, Ovidiu Daescu:
Optimization of IMRT treatment plan with Kinetic Data Structures. 1-6 - Chong Chu, Yufeng Wu:
An SVM-based approach for discovering splicing junctions with RNA-Seq. 1 - Deepali Jhamb, Anand Krishnan, Meelia Palakal, Yogesh Pandit, Mathew J. Palakal, Premkumar Duraiswamy:
Identification of protein interaction methods from biomedical literature. 1-6 - Xiaxia Yu, Robert W. Harrison, Irene T. Weber:
Identifying representative drug resistant mutants of HIV reverse transcriptase. 1 - Abdullah-Al Mamun, Robert H. Aseltine, Sanguthevar Rajasekaran:
Poster: Efficient record linkage techniques. 1 - Shuhua Fu, Aaron M. Tarone, Sing-Hoi Sze:
Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data. 1 - John S. Yordy:
"Use of computational biology in assessing treatment response and disease progression". 1 - Nataliya Timoshevskaya, Wu-chun Feng:
SAIS-OPT: On the characterization and optimization of the SA-IS algorithm for suffix array construction. 1-6 - David Schwartz:
"Informatics integrated into front end management of radiation oncology patients". 1 - Subrata Saha, Sanguthevar Rajasekaran:
Efficient algorithms for error correction and compression of NGS data. 1 - Laura L. Pullum, Arvind Ramanathan:
Oak Ridge Biosurveillance Toolkit: Scalable machine learning for public health surveillance. 1 - Faraz Hussain, Arvind Ramanathan, Laura L. Pullum, Sumit Kumar Jha:
EpiSpec: A formal specification language for parameterized agent-based models against epidemiological ground truth. 1-6 - Pavel Skums, Alexander Artyomenko, Olga Glebova, Alex Zelikovsky, David S. Campo, Zoya Dimitrova, Yuri Khudyakov:
Detection of genetic relatedness between viral samples using EM-based clustering of next-generation sequencing data. 1 - Amit Sawant:
"Imaging and image guidance in lung cancer therapeutics". 1 - Igor Mandric, James Lindsay, Ion I. Mandoiu, Alex Zelikovsky:
SILP3: Maximum likelihood approach to scaffolding. 1 - Deepali Jhamb, Meeta Pradhan, Akshay Desai, Mathew J. Palakal, Premkumar Duraiswamy:
A systems biology analysis for the whole genome sequencing data. 1-6 - Forough Firoozbakht, Iman Rezaeian, Lisa A. Porter, Luis Rueda:
Breast cancer subtype identification using machine learning techniques. 1-2 - Jaimit Parikh, Adam Kapela, Daniel Rodríguez, Nikolaos Tsoukias:
Multi-scale modeling of microvascular reactivity. 1-2 - Segun Jung, Yingtao Bi, Ramana V. Davuluri:
Comparison of data discretization methods for cross platform transfer of gene-expression based tumor subtyping classifier. 1-2 - Iman Rezaeian, Luis Rueda:
A new multi-level thresholding algorithm for finding peaks in ChIP-Seq data. 1-6 - Vida Abedi, Mohammed Yeasin, Ramin Zand:
Poster: Context-sensitive use of bioinformatics tools with complementary functionalities for hypothesis generation. 1-2 - Faraz Hussain, Christopher James Langmead, Qi Mi, Joyeeta Dutta-Moscato, Yoram Vodovotz, Sumit Kumar Jha:
Parameter discovery for stochastic computational models in systems biology using Bayesian model checking. 1-2 - Adrian Caciula, Olga Glebova, Alexander Artyomenko, Serghei Mangul, James Lindsay, Ion I. Mandoiu, Alex Zelikovsky:
Deterministic regression algorithm for transcriptome frequency estimation. 1 - Soumitra Pal, Srinivas Aluru:
In search of perfect reads. 1-2 - Egidijus Paliulis, Hesham H. Ali:
An integrated model of human Biomedical and Clinical Data structures. 1-6 - James Lara, Yury Kudhyakov:
Modeling genetic heterogeneity in Hepatitis C Virus hyper-variable region 1 infers demographic characteristics of infected hosts. 1 - Puneeth Iyengar:
"A global view of how technology is guiding radiation therapeutics for cancers". 1 - Serghei Mangul, Nicholas C. Wu, Nicholas Mancuso, Alex Zelikovsky, Ren Sun, Eleazar Eskin:
VGA: A method for viral quasispecies assembly from ultra-deep sequencing data. 1 - Faraz Hussain, Alvaro Velasquez, Emily Sassano, Sumit Kumar Jha:
Putting humpty-dumpty together: Mining causal mechanistic biochemical models from big data. 1-6 - Chayaporn Suphavilai, Liugen Zhu, Jake Y. Chen:
Constructing regulatory gene set networks to reveal novel insights into biological systems. 1-2 - Alexander Artyomenko, Serghei Mangul, Nicholas C. Wu, Eleazar Eskin, Ren Sun, Alex Zelikovsky:
Reconstruction of influenza a virus variants from PacBio reads. 1 - Haitham Gabr, Tamer Kahveci:
Characterization of probabilistic signaling networks through signal propagation. 1-2 - K. M. Shabana, K. A. Abdul Nazeer, Meeta Pradhan, Mathew J. Palakal:
A computational method for drug repositioning using publicly available gene expression data. 1-2 - David S. Campo, Zoya Dimitrova, Guo-liang Xia, Pavel Skums, Lilia Ganova-Raeva, Yuri Khudyakov:
New computational methods for assessing the genetic relatedness of close viral variants. 1 - Helen Piontkivska, Sinu Paul, Brian Scharfenberg, Marta Wayne, Luis F. Matos, William G. Farmerie, Michael M. Miyamoto:
Role of ADAR in determining the substitution pattern in sigma virus (Rhabdoviridae) in Drosophila melanogaster. 1
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