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9th CPM 1998: Piscataway, New Jersey, USA

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Martin Farach-Colton:
Combinatorial Pattern Matching, 9th Annual Symposium, CPM 98, Piscataway, New Jersey, USA, July 20-22, 1998, Proceedings. Lecture Notes in Computer Science 1448, Springer 1998, ISBN 3-540-64739-2

Session I

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Gene Myers:
A Fast Bit-Vector Algorithm for Approximate String Matching Based on Dynamic Programming. 1-13
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  - conf/cpm/NavarroR98
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Gonzalo Navarro, Mathieu Raffinot:
A Bit-Parallel Approach to Suffix Automata: Fast Extended String Matching. 14-33
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Michal Ziv-Ukelson, Aaron Kershenbaum:
A Dictionary Matching Algorithm Fast on the Average for Terms of Varying Length. 34-54
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Christian Charras, Thierry Lecroq, Joseph Daniel Pehoushek:
A Very Fast String Matching Algorithm for Small Alphabeths and Long Patterns (Extended Abstract). 55-64

Session II

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Knut Magne Risvik:
Approximate Word Sequence Matching over Sparse Suffix Trees. 65-79
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Kaizhong Zhang:
Efficient Parallel Algorithm for the Editing Distance between Ordered Trees. 80-90
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Eugene W. Myers, Paulo Oliva, Katia S. Guimarães:
Reporting Exact and Approximate Regular Expression Matches. 91-103

Session III

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Yanling Yang, Kaizhong Zhang, Xiong Wang, Jason Tsong-Li Wang, Dennis E. Shasha:
An Approximate Oracle for Distance in Metric Spaces. 104-117
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Kimmo Fredriksson, Esko Ukkonen:
A Rotation Invariant Filter for Two-Dimensional String Matching. 118-125
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Dong Kyue Kim, Yoo Ah Kim, Kunsoo Park:
Constructing Suffix Arrays for Multi-dimensional Matrices. 126-139

Session IV

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Jens Stoye, Dan Gusfield:
Simple and Flexible Detection of Contiguous Repeats Using a Suffix Tree (Preliminary Version). 140-152
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Christian N. S. Pedersen, Rune B. Lyngsø, Jotun Hein:
Comparison of Coding DNA. 153-173
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Bin Ma, Lusheng Wang, Ming Li:
Fixed Topology Alignment with Recombination. 174-188
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John D. Kececioglu, Weiqing Zhang:
Aligning Alignments. 189-208

Session V

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Amihood Amir, Gad M. Landau, Moshe Lewenstein, Noa Lewenstein:
Efficient Special Cases of Pattern Matching with Swaps. 209-220
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Yufang Hua, Tao Jiang, Bin Wu:
Aligning DNA Sequences to Minimize the Change in Protein (Extended Abstract). 221-234
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Nadia El-Mabrouk, Joseph H. Nadeau, David Sankoff:
Genome Halving. 235-250

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