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ORCID21st BioNLP@ACL 2022: Dublin, Ireland
- Dina Demner-Fushman, Kevin Bretonnel Cohen, Sophia Ananiadou, Junichi Tsujii:
Proceedings of the 21st Workshop on Biomedical Language Processing, BioNLP@ACL 2022, Dublin, Ireland, May 26, 2022. Association for Computational Linguistics 2022, ISBN 978-1-955917-27-8 - Alodie Boissonnet, Marzieh Saeidi, Vassilis Plachouras, Andreas Vlachos
:
Explainable Assessment of Healthcare Articles with QA. 1-9 - John M. Giorgi, Gary D. Bader, Bo Wang:
A sequence-to-sequence approach for document-level relation extraction. 10-25 - Micheal Abaho, Danushka Bollegala, Paula Williamson, Susanna Dodd:
Position-based Prompting for Health Outcome Generation. 26-36 - Shahla Farzana, Ashwin Deshpande, Natalie Parde:
How You Say It Matters: Measuring the Impact of Verbal Disfluency Tags on Automated Dementia Detection. 37-48 - Amir Soleimani, Vassilina Nikoulina, Benoît Favre, Salah Ait-Mokhtar:
Zero-Shot Aspect-Based Scientific Document Summarization using Self-Supervised Pre-training. 49-62 - Dimitris Pappas, Prodromos Malakasiotis, Ion Androutsopoulos:
Data Augmentation for Biomedical Factoid Question Answering. 63-81 - Yannis Papanikolaou, Marlene Staib, Justin Joshua Grace, Francine Bennett:
Slot Filling for Biomedical Information Extraction. 82-90 - Sihang Zeng, Zheng Yuan, Sheng Yu:
Automatic Biomedical Term Clustering by Learning Fine-grained Term Representations. 91-96 - Hongyi Yuan, Zheng Yuan, Ruyi Gan, Jiaxing Zhang, Yutao Xie, Sheng Yu:
BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model. 97-109 - Usman Naseem, Ajay Bandi, Shaina Raza, Junaid Rashid, Bharathi Raja Chakravarthi:
Incorporating Medical Knowledge to Transformer-based Language Models for Medical Dialogue Generation. 110-115 - Sixing Yan:
Memory-aligned Knowledge Graph for Clinically Accurate Radiology Image Report Generation. 116-122 - Uyen Phan, Nhung Nguyen:
Simple Semantic-based Data Augmentation for Named Entity Recognition in Biomedical Texts. 123-129 - Taiki Watanabe, Tomoya Ichikawa, Akihiro Tamura, Tomoya Iwakura, Chunpeng Ma, Tsuneo Kato:
Auxiliary Learning for Named Entity Recognition with Multiple Auxiliary Biomedical Training Data. 130-139 - Samuel Cahyawijaya, Tiezheng Yu, Zihan Liu, Xiaopu Zhou, Tze Wing Tiffany Mak, Nancy Y. Ip, Pascale Fung:
SNP2Vec: Scalable Self-Supervised Pre-Training for Genome-Wide Association Study. 140-154 - Anshita Khandelwal, Alok Kar, Veera Raghavendra Chikka, Kamalakar Karlapalem:
Biomedical NER using Novel Schema and Distant Supervision. 155-160 - Naoki Iinuma, Makoto Miwa, Yutaka Sasaki:
Improving Supervised Drug-Protein Relation Extraction with Distantly Supervised Models. 161-170 - Hai-Long Trieu, Makoto Miwa, Sophia Ananiadou:
Named Entity Recognition for Cancer Immunology Research Using Distant Supervision. 171-177 - Christian Witte, Philipp Cimiano:
Intra-Template Entity Compatibility based Slot-Filling for Clinical Trial Information Extraction. 178-192 - Casimiro Pio Carrino, Joan Llop, Marc Pàmies, Asier Gutiérrez-Fandiño, Jordi Armengol-Estapé, Joaquín Silveira-Ocampo, Alfonso Valencia, Aitor Gonzalez-Agirre, Marta Villegas:
Pretrained Biomedical Language Models for Clinical NLP in Spanish. 193-199 - Saadullah Amin, Noon Pokaratsiri Goldstein, Morgan Kelly Wixted, Alejandro García-Rudolph, Catalina Martínez-Costa, Guenter Neumann:
Few-Shot Cross-lingual Transfer for Coarse-grained De-identification of Code-Mixed Clinical Texts. 200-211 - Bin Li, Yixuan Weng, Fei Xia, Bin Sun, Shutao Li:
VPAI_Lab at MedVidQA 2022: A Two-Stage Cross-modal Fusion Method for Medical Instructional Video Classification. 212-219 - Jennifer Bishop, Qianqian Xie, Sophia Ananiadou:
GenCompareSum: a hybrid unsupervised summarization method using salience. 220-240 - Sudipta Singha Roy, Robert E. Mercer:
BioCite: A Deep Learning-based Citation Linkage Framework for Biomedical Research Articles. 241-251 - Zhengzhong Liang, Enrique Noriega-Atala, Clayton T. Morrison, Mihai Surdeanu:
Low Resource Causal Event Detection from Biomedical Literature. 252-263 - Deepak Gupta, Dina Demner-Fushman:
Overview of the MedVidQA 2022 Shared Task on Medical Video Question-Answering. 264-274 - Russell Richie, Sachin Grover, Fuchiang (Rich) Tsui:
Inter-annotator agreement is not the ceiling of machine learning performance: Evidence from a comprehensive set of simulations. 275-284 - Avisha Das, Salih Selek, Alia R. Warner, Xu Zuo, Yan Hu, Vipina Kuttichi Keloth, Jianfu Li, W. Jim Zheng, Hua Xu:
Conversational Bots for Psychotherapy: A Study of Generative Transformer Models Using Domain-specific Dialogues. 285-297 - Xing David Wang, Ulf Leser, Leon Weber:
BEEDS: Large-Scale Biomedical Event Extraction using Distant Supervision and Question Answering. 298-309 - Bosung Kim, Ndapa Nakashole:
Data Augmentation for Rare Symptoms in Vaccine Side-Effect Detection. 310-315 - Maria Mitrofan, Vasile Florian Pais:
Improving Romanian BioNER Using a Biologically Inspired System. 316-322 - Salim Sazzed:
BanglaBioMed: A Biomedical Named-Entity Annotated Corpus for Bangla (Bengali). 323-329 - George Michalopoulos, Michal Malyska, Nicola Sahar, Alexander Wong, Helen H. Chen:
ICDBigBird: A Contextual Embedding Model for ICD Code Classification. 330-336 - Hillary Ngai, Frank Rudzicz:
Doctor XAvIer: Explainable Diagnosis on Physician-Patient Dialogues and XAI Evaluation. 337-344 - Anjani Dhrangadhariya, Henning Müller:
DISTANT-CTO: A Zero Cost, Distantly Supervised Approach to Improve Low-Resource Entity Extraction Using Clinical Trials Literature. 345-358 - Liyan Tang, Shravan Kooragayalu, Yanshan Wang, Ying Ding, Greg Durrett, Justin F. Rousseau, Yifan Peng:
EchoGen: Generating Conclusions from Echocardiogram Notes. 359-368 - Kevin Xie, Brian Litt, Dan Roth, Colin A. Ellis:
Quantifying Clinical Outcome Measures in Patients with Epilepsy Using the Electronic Health Record. 369-375 - Mourad Sarrouti, Carson Tao, Yoann Mamy Randriamihaja:
Comparing Encoder-Only and Encoder-Decoder Transformers for Relation Extraction from Biomedical Texts: An Empirical Study on Ten Benchmark Datasets. 376-382 - Thomas Vakili, Hercules Dalianis:
Utility Preservation of Clinical Text After De-Identification. 383-388 - Matús Falis, Hang Dong, Alexandra Birch, Beatrice Alex:
Horses to Zebras: Ontology-Guided Data Augmentation and Synthesis for ICD-9 Coding. 389-401 - Sidhant Chandak, Liqing Zhang, Connor L. Brown, Lifu Huang:
Towards Automatic Curation of Antibiotic Resistance Genes via Statement Extraction from Scientific Papers: A Benchmark Dataset and Models. 402-411 - Zach Wood-Doughty, Isabel Cachola, Mark Dredze:
Model Distillation for Faithful Explanations of Medical Code Predictions. 412-425 - Jennifer J. Liang, Eric Lehman, Ananya Iyengar, Diwakar Mahajan, Preethi Raghavan, Cindy Y. Chang, Peter Szolovits:
Towards Generalizable Methods for Automating Risk Score Calculation. 426-431 - Wojciech Kusa, Georgios Peikos, Oscar Espitia, Allan Hanbury, Gabriella Pasi:
DoSSIER at MedVidQA 2022: Text-based Approaches to Medical Video Answer Localization Problem. 432-440
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