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Paraskevi Gkeka

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affiliation: Biomedical Research Foundation of the Academy of Athens (BRFAA), Athens, Greece

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2020 – today

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2022
[j4]
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  - journals/bioinformatics/PaneiTMGB22
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  - https://dblp.org/rec/journals/bioinformatics/PaneiTMGB22
Francesco P. Panei, Rachel Torchet, Hervé Ménager, Paraskevi Gkeka, Massimiliano Bonomi:
HARIBOSS: a curated database of RNA-small molecules structures to aid rational drug design. Bioinform. 38(17): 4185-4193 (2022)
2021
[i1]
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Zineb Belkacemi, Paraskevi Gkeka, Tony Lelièvre, Gabriel Stoltz:
Chasing Collective Variables using Autoencoders and biased trajectories. CoRR abs/2104.11061 (2021)

2010 – 2019

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2016
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Harris Ioannidis, Antonios Drakopoulos, Christina Tzitzoglaki, Nadine Homeyer, Felix Kolarov, Paraskevi Gkeka, Kathrin Freudenberger, Christos Liolios, Günter Gauglitz, Zoe Cournia, Holger Gohlke, Antonios Kolocouris:
Alchemical Free Energy Calculations and Isothermal Titration Calorimetry Measurements of Aminoadamantanes Bound to the Closed State of Influenza A/M2TM. J. Chem. Inf. Model. 56(5): 862-876 (2016)
2014
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  - journals/ploscb/GkekaEPLCAC14
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Paraskevi Gkeka, Thomas Evangelidis, Maria Pavlaki, Vasiliki Lazani, Savvas Christoforidis, Bogos Agianian, Zoe Cournia:
Investigating the Structure and Dynamics of the PIK3CA Wild-Type and H1047R Oncogenic Mutant. PLoS Comput. Biol. 10(10) (2014)
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Paraskevi Gkeka, Panagiotis Angelikopoulos, Lev Sarkisov, Zoe Cournia:
Membrane Partitioning of Anionic, Ligand-Coated Nanoparticles Is Accompanied by Ligand Snorkeling, Local Disordering, and Cholesterol Depletion. PLoS Comput. Biol. 10(12) (2014)
2012
[c1]
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  - conf/bibe/GkekaASC12
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Paraskevi Gkeka, Emmanouil Athanasiadis, George M. Spyrou, Zoe Cournia:
Enhancing the effectiveness of virtual screening by using the ChemBioServer: Application to the discovery of PI3Kα inhibitors. BIBE 2012: 266-269

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