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ORCIDBibTeX records: Qiu Xiao
@article{DBLP:journals/jcb/ZhongCZXQ23,
author = {Jiancheng Zhong and
Pan Cui and
Yihong Zhu and
Qiu Xiao and
Zuohang Qu},
title = {{DAHNGC:} {A} Graph Convolution Model for Drug-Disease Association
Prediction by Using Heterogeneous Network},
journal = {J. Comput. Biol.},
volume = {30},
number = {9},
pages = {1019--1033},
year = {2023},
url = {https://doi.org/10.1089/cmb.2023.0135},
doi = {10.1089/CMB.2023.0135},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/ZhongCZXQ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/LiZLLX23,
author = {Guanghui Li and
Feifan Zeng and
Jiawei Luo and
Cheng Liang and
Qiu Xiao},
title = {{MNCLCDA:} predicting circRNA-drug sensitivity associations by using
mixed neighbourhood information and contrastive learning},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {23},
number = {1},
pages = {291},
year = {2023},
url = {https://doi.org/10.1186/s12911-023-02384-0},
doi = {10.1186/S12911-023-02384-0},
timestamp = {Wed, 10 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/midm/LiZLLX23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/XiaoDL22,
author = {Qiu Xiao and
Jianhua Dai and
Jiawei Luo},
title = {A survey of circular RNAs in complex diseases: databases, tools and
computational methods},
journal = {Briefings Bioinform.},
volume = {23},
number = {1},
year = {2022},
url = {https://doi.org/10.1093/bib/bbab444},
doi = {10.1093/BIB/BBAB444},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/XiaoDL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiFZLXL22,
author = {Guanghui Li and
Tao Fang and
Yuejin Zhang and
Cheng Liang and
Qiu Xiao and
Jiawei Luo},
title = {Predicting miRNA-disease associations based on graph attention network
with multi-source information},
journal = {{BMC} Bioinform.},
volume = {23},
number = {1},
pages = {244},
year = {2022},
url = {https://doi.org/10.1186/s12859-022-04796-7},
doi = {10.1186/S12859-022-04796-7},
timestamp = {Tue, 28 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiFZLXL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/LiLLXL22,
author = {Guanghui Li and
Yawei Lin and
Jiawei Luo and
Qiu Xiao and
Cheng Liang},
title = {{GGAECDA:} Predicting circRNA-disease associations using graph autoencoder
based on graph representation learning},
journal = {Comput. Biol. Chem.},
volume = {99},
pages = {107722},
year = {2022},
url = {https://doi.org/10.1016/j.compbiolchem.2022.107722},
doi = {10.1016/J.COMPBIOLCHEM.2022.107722},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/candc/LiLLXL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhengXZ22,
author = {HaoRan Zheng and
Qiu Xiao and
Jiancheng Zhong},
editor = {Donald A. Adjeroh and
Qi Long and
Xinghua Mindy Shi and
Fei Guo and
Xiaohua Hu and
Srinivas Aluru and
Giri Narasimhan and
Jianxin Wang and
Mingon Kang and
Ananda Mondal and
Jin Liu},
title = {Predicting miRNA-disease associations via multi-channel graph convolutional
networks},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022},
pages = {700--705},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/BIBM55620.2022.9994981},
doi = {10.1109/BIBM55620.2022.9994981},
timestamp = {Thu, 12 Jan 2023 09:26:28 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhengXZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhongKSXP22,
author = {Jiancheng Zhong and
Jiedong Kang and
Xingran Song and
Qiu Xiao and
Yi Pan},
editor = {Donald A. Adjeroh and
Qi Long and
Xinghua Mindy Shi and
Fei Guo and
Xiaohua Hu and
Srinivas Aluru and
Giri Narasimhan and
Jianxin Wang and
Mingon Kang and
Ananda Mondal and
Jin Liu},
title = {Prediction of miRNA and Disease Association based on Graph Convolution
Network using Latent Feature Vector by Positive Samples},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022},
pages = {706--711},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/BIBM55620.2022.9995084},
doi = {10.1109/BIBM55620.2022.9995084},
timestamp = {Thu, 12 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhongKSXP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhongCQWXZ22,
author = {Jiancheng Zhong and
Pan Cui and
Zuohang Qu and
Liuping Wang and
Qiu Xiao and
Yihong Zhu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Prediction of Drug-Disease Relationship on Heterogeneous Networks
Based on Graph Convolution},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {243--254},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_22},
doi = {10.1007/978-3-031-23198-8\_22},
timestamp = {Mon, 09 Jan 2023 17:58:33 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhongCQWXZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/XiaoZLDT21,
author = {Qiu Xiao and
Ning Zhang and
Jiawei Luo and
Jianhua Dai and
Xiwei Tang},
title = {Adaptive multi-source multi-view latent feature learning for inferring
potential disease-associated miRNAs},
journal = {Briefings Bioinform.},
volume = {22},
number = {2},
pages = {2043--2057},
year = {2021},
url = {https://doi.org/10.1093/bib/bbaa028},
doi = {10.1093/BIB/BBAA028},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/XiaoZLDT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/XiaoFYDL21,
author = {Qiu Xiao and
Yu Fu and
Yide Yang and
Jianhua Dai and
Jiawei Luo},
title = {{NSL2CD:} identifying potential circRNA-disease associations based
on network embedding and subspace learning},
journal = {Briefings Bioinform.},
volume = {22},
number = {6},
year = {2021},
url = {https://doi.org/10.1093/bib/bbab177},
doi = {10.1093/BIB/BBAB177},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/XiaoFYDL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhongTPXSTXY21,
author = {Jiancheng Zhong and
Chao Tang and
Wei Peng and
Minzhu Xie and
Yusui Sun and
Qiang Tang and
Qiu Xiao and
Jiahong Yang},
title = {A novel essential protein identification method based on {PPI} networks
and gene expression data},
journal = {{BMC} Bioinform.},
volume = {22},
number = {1},
pages = {248},
year = {2021},
url = {https://doi.org/10.1186/s12859-021-04175-8},
doi = {10.1186/S12859-021-04175-8},
timestamp = {Wed, 19 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhongTPXSTXY21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/DingLOLXL21,
author = {Pingjian Ding and
Cheng Liang and
Wenjue Ouyang and
Guanghui Li and
Qiu Xiao and
Jiawei Luo},
title = {Inferring Synergistic Drug Combinations Based on Symmetric Meta-Path
in a Novel Heterogeneous Network},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {18},
number = {4},
pages = {1562--1571},
year = {2021},
url = {https://doi.org/10.1109/TCBB.2019.2951557},
doi = {10.1109/TCBB.2019.2951557},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/DingLOLXL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/LiLWLXDC20,
author = {Guanghui Li and
Jiawei Luo and
Diancheng Wang and
Cheng Liang and
Qiu Xiao and
Pingjian Ding and
Hailin Chen},
title = {Potential circRNA-disease association prediction using DeepWalk and
network consistency projection},
journal = {J. Biomed. Informatics},
volume = {112},
pages = {103624},
year = {2020},
url = {https://doi.org/10.1016/j.jbi.2020.103624},
doi = {10.1016/J.JBI.2020.103624},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/LiLWLXDC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/XiaoLLLCDL20,
author = {Qiu Xiao and
Jiawei Luo and
Cheng Liang and
Guanghui Li and
Jie Cai and
Pingjian Ding and
Ying Liu},
title = {Identifying lncRNA and mRNA Co-Expression Modules from Matched Expression
Data in Ovarian Cancer},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {17},
number = {2},
pages = {623--634},
year = {2020},
url = {https://doi.org/10.1109/TCBB.2018.2864129},
doi = {10.1109/TCBB.2018.2864129},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/XiaoLLLCDL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/LiLLXDZ19,
author = {Guanghui Li and
Jiawei Luo and
Cheng Liang and
Qiu Xiao and
Pingjian Ding and
Yuejin Zhang},
title = {Prediction of LncRNA-Disease Associations Based on Network Consistency
Projection},
journal = {{IEEE} Access},
volume = {7},
pages = {58849--58856},
year = {2019},
url = {https://doi.org/10.1109/ACCESS.2019.2914533},
doi = {10.1109/ACCESS.2019.2914533},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/access/LiLLXDZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiaoLLCLC19,
author = {Qiu Xiao and
Jiawei Luo and
Cheng Liang and
Jie Cai and
Guanghui Li and
Buwen Cao},
title = {CeModule: an integrative framework for discovering regulatory patterns
from genomic data in cancer},
journal = {{BMC} Bioinform.},
volume = {20},
number = {1},
pages = {67:1--67:13},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2654-3},
doi = {10.1186/S12859-019-2654-3},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiaoLLCLC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kbs/XiaoDLF19,
author = {Qiu Xiao and
Jianhua Dai and
Jiawei Luo and
Hamido Fujita},
title = {Multi-view manifold regularized learning-based method for prioritizing
candidate disease miRNAs},
journal = {Knowl. Based Syst.},
volume = {175},
pages = {118--129},
year = {2019},
url = {https://doi.org/10.1016/j.knosys.2019.03.023},
doi = {10.1016/J.KNOSYS.2019.03.023},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/kbs/XiaoDLF19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/XiaoLD19,
author = {Qiu Xiao and
Jiawei Luo and
Jianhua Dai},
title = {Computational Prediction of Human Disease- Associated circRNAs Based
on Manifold Regularization Learning Framework},
journal = {{IEEE} J. Biomed. Health Informatics},
volume = {23},
number = {6},
pages = {2661--2669},
year = {2019},
url = {https://doi.org/10.1109/JBHI.2019.2891779},
doi = {10.1109/JBHI.2019.2891779},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/titb/XiaoLD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XiaoLLCD18,
author = {Qiu Xiao and
Jiawei Luo and
Cheng Liang and
Jie Cai and
Pingjian Ding},
title = {A graph regularized non-negative matrix factorization method for identifying
microRNA-disease associations},
journal = {Bioinform.},
volume = {34},
number = {2},
pages = {239--248},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/btx545},
doi = {10.1093/BIOINFORMATICS/BTX545},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/XiaoLLCD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/DingLLXC18,
author = {Pingjian Ding and
Jiawei Luo and
Cheng Liang and
Qiu Xiao and
Buwen Cao},
title = {Human disease MiRNA inference by combining target information based
on heterogeneous manifolds},
journal = {J. Biomed. Informatics},
volume = {80},
pages = {26--36},
year = {2018},
url = {https://doi.org/10.1016/j.jbi.2018.02.013},
doi = {10.1016/J.JBI.2018.02.013},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/DingLLXC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/LiLXLD18,
author = {Guanghui Li and
Jiawei Luo and
Qiu Xiao and
Cheng Liang and
Pingjian Ding},
title = {Predicting microRNA-disease associations using label propagation based
on linear neighborhood similarity},
journal = {J. Biomed. Informatics},
volume = {82},
pages = {169--177},
year = {2018},
url = {https://doi.org/10.1016/j.jbi.2018.05.005},
doi = {10.1016/J.JBI.2018.05.005},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/LiLXLD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuLDX18,
author = {Qiao Zhu and
Jiawei Luo and
Pingjian Ding and
Qiu Xiao},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {{GRTR:} Drug-Disease Association Prediction Based on Graph Regularized
Transductive Regression on Heterogeneous Network},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {13--25},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_2},
doi = {10.1007/978-3-319-94968-0\_2},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhuLDX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/LuoXLD17,
author = {Jiawei Luo and
Qiu Xiao and
Cheng Liang and
Pingjian Ding},
title = {Predicting MicroRNA-Disease Associations Using Kronecker Regularized
Least Squares Based on Heterogeneous Omics Data},
journal = {{IEEE} Access},
volume = {5},
pages = {2503--2513},
year = {2017},
url = {https://doi.org/10.1109/ACCESS.2017.2672600},
doi = {10.1109/ACCESS.2017.2672600},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/access/LuoXLD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/LiLXLDC17,
author = {Guanghui Li and
Jiawei Luo and
Qiu Xiao and
Cheng Liang and
Pingjian Ding and
Buwen Cao},
title = {Predicting MicroRNA-Disease Associations Using Network Topological
Similarity Based on DeepWalk},
journal = {{IEEE} Access},
volume = {5},
pages = {24032--24039},
year = {2017},
url = {https://doi.org/10.1109/ACCESS.2017.2766758},
doi = {10.1109/ACCESS.2017.2766758},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/access/LiLXLDC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/LuoX17,
author = {Jiawei Luo and
Qiu Xiao},
title = {A novel approach for predicting microRNA-disease associations by unbalanced
bi-random walk on heterogeneous network},
journal = {J. Biomed. Informatics},
volume = {66},
pages = {194--203},
year = {2017},
url = {https://doi.org/10.1016/j.jbi.2017.01.008},
doi = {10.1016/J.JBI.2017.01.008},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/LuoX17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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